prot_C-linearis_contig80.15880.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15880.1
Unique Nameprot_C-linearis_contig80.15880.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length493
Homology
BLAST of mRNA_C-linearis_contig80.15880.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.090e-115
Identity = 264/401 (65.84%), Postives = 301/401 (75.06%), Query Frame = 0
Query:   95 MKEEAEEARDYGKKLAQEMVRLERVARTLPPDVAPSLEKLRRLVATLTEVKLQEQAALEEGRAREAALRAEIEEFTSGTG---GDGGQPAPXSTAVVDXXXXXXXXXXXXXXXEGSVQAISSTNGTGGVVLEKSVDDPLAAMAESXXXXXXXXXXXXGRAAXXXXXXXXXXXXTSGVISVPRTTVVSGTSDGDNSSSSSGGPRGKKPALEGKALLAEGLHRIEASYQAAGVEREQTASRLSRLRLAVARRQREEDAAPGHAELLQYLLRFEELGRHAMERREQLRRCQAERSTLALTRELLAKQARLLETIAGGVEEASQGGKPAREAYMRQITEIIEGVEHSLQNQKCLLDEARSRRQTAEKVQASLKDDRKRFLAGTKELADECYKHEALTAHLALMRR 492
            M+EEAE+ARDYG KLAQEM RL R+ RTL PD + SLEKLRRLVATLTE++ QEQAALE+G+AREAALRAEI EFT  T    G GG       A V XXXXXXXXXXXXXXX                VLEK+VDDPLA     XXXXXXXXXXXX    XXXXXXXXXXXX                   +  ++       KKPALEGKAL AEGLHRIEA+Y+ A  ERE++A+RLSRLRLAVARRQREED A GHAELLQYLLRFEELG+H++ER+EQLRRC+AERSTL+LTRELLA QARLLETIAGGVEEAS+GGK  REAY+RQI  I+E VE SL++Q  LLD  R RR  AE++QAS+++DRKRF AGTKEL+DECY++E+L AHLALMRR
Sbjct:    1 MEEEAEQARDYGNKLAQEMARLGRITRTLAPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRAEIAEFTGETTEDVGGGGDGLGEKPAAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLEKTVDDPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAERKAN-----HRKKPALEGKALFAEGLHRIEAAYEVAAAEREESAARLSRLRLAVARRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVESVEDSLEDQTRLLDNVRRRRHVAEELQASVREDRKRFFAGTKELSDECYRYESLNAHLALMRR 396          
BLAST of mRNA_C-linearis_contig80.15880.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 1.660e-113
Identity = 239/381 (62.73%), Postives = 265/381 (69.55%), Query Frame = 0
Query:   56 MQQERHAEALSLRKRGAELEELLVAARSRRTSARERREFMKEEAEEARDYGKKLAQEMVRLERVARTLPPDVAPSLEKLRRLVATLTEVKLQEQAALEEGRAREAALRAEIEEFTSGTGGDGGQPAPXSTAVVDXXXXXXXXXXXXXXX----EGSVQAISSTNGTGGVVLEKSVDDPLAAMAESXXXXXXXXXXXXGRAAXXXXXXXXXXXXTSGVISVPRTTVVSGTSDGDNSSSSSGGPRG---KKPALEGKALLAEGLHRIEASYQAAGVEREQTASRLSRLRLAVARRQREEDAAPGHAELLQYLLRFEELGRHAMERREQLRRCQAERSTLALTRELLAKQARLLETIAGGVEEASQGGKPAREAYMRQITEIIE 429
            MQQ+R AE LSLR+RGAELEE L AAR   TSARERREFM+EEAE+ARDYG KLAQEM RL R+ RTLPPD + SLEKLRRLVATLTE++ QEQAALE+G+AREAALR EI EFT  T GDG     X      XXXXXXX            EG  +A     G GG VLEK+VDDPLAAMAE                               G +SV RT VV G              R    KKPALEGKAL AEGLHRIEA+Y+ A  ERE++A+RLSRLRLAVARRQREEDAA GHAELLQYLLRFEELG+H++ER+EQLRRC+AER  L+LTRELLAKQARLLETIAGGVEEAS GGK  REAY+RQI  I+E
Sbjct:    1 MQQQRQAEVLSLRERGAELEERLQAARIALTSARERREFMEEEAEQARDYGDKLAQEMARLGRITRTLPPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRTEIAEFTGETTGDGXXXXXXXXXXXXXXXXXXXDAAPATAGAPAGEGGGRAGKGREG-GGFVLEKAVDDPLAAMAEPQEHQEEDKSGAGNIVGAVPAAGV-------GTVSVLRTAVVLGXXXXXXXXXXXPAERANHRKKPALEGKALFAEGLHRIEAAYEVAVAEREESAARLSRLRLAVARRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIVE 373          
BLAST of mRNA_C-linearis_contig80.15880.1 vs. uniprot
Match: A0A6H5JXP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP6_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.970e-15
Identity = 39/65 (60.00%), Postives = 53/65 (81.54%), Query Frame = 0
Query:  428 IEGVEHSLQNQKCLLDEARSRRQTAEKVQASLKDDRKRFLAGTKELADECYKHEALTAHLALMRR 492
            ++ VE SL++Q  LLD  R RR  AE++QAS+++DRKRF AG KEL+DECY++E+L AHLALM+R
Sbjct:    3 LKSVEDSLEDQTRLLDNVRRRRHAAEELQASVREDRKRFFAGMKELSDECYRYESLNAHLALMQR 67          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G045_ECTSI1.090e-11565.84Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTA4_9PHAE1.660e-11362.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXP6_9PHAE9.970e-1560.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 428..462
NoneNo IPR availableCOILSCoilCoilcoord: 78..105
NoneNo IPR availablePANTHERPTHR16441:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 93coord: 45..178
coord: 310..488
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 45..178
coord: 310..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:409737..413180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15880.1mRNA_C-linearis_contig80.15880.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 409477..419551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15880.1 ID=prot_C-linearis_contig80.15880.1|Name=mRNA_C-linearis_contig80.15880.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=493bp
MAVAPSGELMRRQEDVPDDTISAASTSTSTSVPLEGSTGLLEVSTGQDEA
EQRSRMQQERHAEALSLRKRGAELEELLVAARSRRTSARERREFMKEEAE
EARDYGKKLAQEMVRLERVARTLPPDVAPSLEKLRRLVATLTEVKLQEQA
ALEEGRAREAALRAEIEEFTSGTGGDGGQPAPPSTAVVDAASPPSAAAGG
VAPEEGSVQAISSTNGTGGVVLEKSVDDPLAAMAESQEKKEEDAKKEEGR
AAGARAGAGAGAASTSGVISVPRTTVVSGTSDGDNSSSSSGGPRGKKPAL
EGKALLAEGLHRIEASYQAAGVEREQTASRLSRLRLAVARRQREEDAAPG
HAELLQYLLRFEELGRHAMERREQLRRCQAERSTLALTRELLAKQARLLE
TIAGGVEEASQGGKPAREAYMRQITEIIEGVEHSLQNQKCLLDEARSRRQ
TAEKVQASLKDDRKRFLAGTKELADECYKHEALTAHLALMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039116CCDC93