prot_C-linearis_contig8.15812.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15812.1
Unique Nameprot_C-linearis_contig8.15812.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length441
Homology
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 7.260e-120
Identity = 213/351 (60.68%), Postives = 252/351 (71.79%), Query Frame = 0
Query:  111 VPVRSVPTRAPRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSS-----------------GRGGM-SRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEY----ARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAAR 439
            VP+ S PTRAPRVYL+ +NLHVG+ V+LT EQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAV++SS                 GRGG   R +RS +  DK VELRV+ L RRQP    G   E +DV AP++EL+FAPIRKQRLK++VEK VE+G SRLTPVLTARTQKG+VSD+  L +LG VTAVEAAEQCERM VP V  +PV L S L+ +E R+S     S      +R  +    LP+ +FVCKERD DA P+LEALAEY    + +R+ D  +S DG       +NA  AFL+GPEGGFDPDE+ A+A YPFV FVSLG  VLRAETAA+YALSSWSAFWA+R
Sbjct:  134 VPLPSPPTRAPRVYLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKRSTVGADKVVELRVECLTRRQPGIGGGGDGEVEDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPVA-SPVTLASYLRSLELRQSSCDLSSIIGLARDRGGDLS--LPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSSDGS------RNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWASR 475          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.710e-98
Identity = 180/309 (58.25%), Postives = 214/309 (69.26%), Query Frame = 0
Query:  150 MRLRDGSPVRVFDGVNGEFLAAVSSSS---------------GRGGM-SRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARD-----RQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWA 437
            MRLRDG+PVRVFDGVNGEFLAAV++SS               GRGG   R +RS    +K +ELRV+ L RRQP    G G E +D+ AP++EL+FAPIRKQRLK++VEK VE+G SRLTPVLTARTQKG+VSD+  L +LG VTAVEAAEQCERM VP +  +PV L S L+ +E R S     S      +R+ +  R LP+ +FVCKERD DA P+LEALAEY +      RQD   SS D        +NA  AFL+GPEGGFDPDE+  +A YPFV FVSLG  VLRAETAA+YALSSWSAFWA
Sbjct:    1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAGGAEKVIELRVECLTRRQPGIGGGGGGEVEDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPMA-SPVTLASYLRSLELRHSSCDGSSIVGLARDRDGD--RSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDN-------RNANAAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWA 299          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.400e-42
Identity = 115/289 (39.79%), Postives = 154/289 (53.29%), Query Frame = 0
Query:  150 MRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAA 438
            MRLRDGS VR F+G +GE+L  +S + G        +   S   ++ L+V+  +R Q + S          A  DV L+ API++QR+KL+VEK  ELGV+ + PVLTA TQ+    D++   +L L  A+EAAEQCER+++P +   P PL  LL    S      R                     +FVC+ER   + P+LEALA  +  R             G     A  AFLVGPEGGF  DE   +A  P++  VSLG  VLRAETAA+YALS +S+F AA
Sbjct:    1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRRSAKPALALQVEQQLRSQAEDS---------CADLDVWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEAL--DAEGTSRL-LPIAIEAAEQCERLSLPHLH-PPAPLPELLARWHSEPHTRAR--------------------QLFVCQERSPQSPPLLEALAAASAAR-------------GVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAA 243          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: UPI0010745A2F (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI0010745A2F)

HSP 1 Score: 134 bits (338), Expect = 4.920e-33
Identity = 102/311 (32.80%), Postives = 151/311 (48.55%), Query Frame = 0
Query:  122 RVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSW 432
            R+Y+ D++L VG   +L+++Q  Y+ +VMRL+ G  V VF+G +GE+L  +SS+                 K+  +++   IR Q              + PD+ L+FAPI+KQRL  ++EK  ELGVS   PV+T RT    +   +   +      +EA+EQCER+ +P V    V L+ L++D    R+                         +FV  E    AKPILE L E+A                    +    A LVGPEGGFDP E+  +A    V  +S+GP +LRA+TAA+ A+S W
Sbjct:    3 RLYI-DTSLSVGLSQDLSSDQAHYVNNVMRLKVGDEVAVFNGQDGEWLGQISSAR---------------KKNCTIQLIEKIREQD-------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSDFQPVITQRTIASKIRSDRLCAQT-----IEASEQCERLNIPVVHEA-VSLVQLVKDWPQERT-------------------------LFVLNEHGG-AKPILEGLQEFA------------------GKEIGPCAILVGPEGGFDPSELDLLAKLQNVVPLSIGPRILRADTAALAAISCW 234          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT)

HSP 1 Score: 134 bits (338), Expect = 5.450e-33
Identity = 109/313 (34.82%), Postives = 150/313 (47.92%), Query Frame = 0
Query:  122 RVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
            R+Y+ D  L  G+ V+L+  Q+ YL  V+RL  G+ V +F+G +GE+ A + +     G                L V++ IR Q             +  PD+ L+FAPI++ RL ++V+K VELGVSRL PVLT RT+   ++  +    L     +EAAEQCERM +P +   P P+L +L D                       TGR L     VC ER   A PI + L        +D T   D             A L GPEGGF   E+ A     F+ FVSLGP +LRAETAA+ A++ W A
Sbjct:   10 RLYV-DQALDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETIRRNAGS---------------LGVETQIRPQ-------------ITEPDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRHRSNL-----IEAAEQCERMTLPEIV-EPRPILDVLSDFP---------------------TGRRL----LVCAERGH-AAPINQIL--------EDDTGEAD-----------RCAILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQA 242          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: W7TJZ1_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.830e-32
Identity = 108/329 (32.83%), Postives = 164/329 (49.85%), Query Frame = 0
Query:  113 VRSVPTRAPRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKL--GLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAAR 439
            V S   R+PR+Y+ ++ L     V ++T+Q  YL+ VMRLR G+ VRVF+  +GE++A V+  +    M   R  G S  K      D  +  +     G G +  D     + L FAP+++ RLK++ EK  E+GV+ L PVLT  T        + + K+  GLV   EAAEQCER+ VP V    +P ++    +E  R    R                     +++C+ER+  A+PI+E L    ++  +D  +      G         + ++GPEGGF P E+ AM  +P +  VSLGP VLRAETA + A+  +  +  AR
Sbjct:  150 VSSEVQRSPRLYVPEALLGKHVPVPISTDQRHYLLKVMRLRPGAYVRVFNRRDGEWIAVVADEAPD--MEPKREIGRSDKKRTRRGSDVSLIAKARIREGGGEQRNDEGESKLRLCFAPLKRARLKILFEKATEMGVTHLQPVLTEHTDVAPRHAEEMMKKMEGGLV---EAAEQCERIGVPEV----LPAMTFDALLEEERGGGGR---------------------LYICREREG-ARPIMEVLERDWKEINEDRKN------GKKEEHRGTPSIVIGPEGGFSPRELAAMKGHPRL--VSLGPSVLRAETAGLVAVGVYVTWQEAR 439          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A6I6MNK5_9CAUL (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Terricaulis silvestris TaxID=2686094 RepID=A0A6I6MNK5_9CAUL)

HSP 1 Score: 132 bits (331), Expect = 7.560e-32
Identity = 107/317 (33.75%), Postives = 158/317 (49.84%), Query Frame = 0
Query:  121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCT-TRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFW 436
            PR+ + D NL  G  + L   Q R++ +V+RL +G  +RVF+  +GE+ A VS+ + RG               + + VD+L+R                A PD++L+FAP+++    L+VEK  ELGV R+ PV+T RT    + ++  L +L  + A EAAEQ ER   P +   PV L  ++   ++ R       +G DA      E+GR               A PI +AL  +          +G   +GG S    ++A L+GPEGGF P+E R + A  FV  VSLGP +LRAETA + ALS   + W
Sbjct:    4 PRLLI-DQNLRPGAAIALDEAQARHVGTVLRLDEGDTLRVFNARDGEWSAKVSAKTKRG---------------MIVAVDALLREAR-------------ATPDLDLLFAPVKRHATDLIVEKATELGVRRIRPVITQRT----IVETVRLDRLQSI-AREAAEQTERFDAPEIMD-PVSLAKIVDGWDAARPLIYADEAGDDANAAWGGESGR---------------AAPIAQALLTWTAGVSPAIAGAGRRDAGGPS----KLALLIGPEGGFTPEERRMLRALTFVTPVSLGPRILRAETAVIAALSVIQSTW 266          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A258H0U3_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A258H0U3_9PROT)

HSP 1 Score: 131 bits (329), Expect = 1.010e-31
Identity = 106/314 (33.76%), Postives = 145/314 (46.18%), Query Frame = 0
Query:  121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
            PR++++  +L  G  + +  +Q  YL  VMRL  G  VRVF+G +GEF A +S +               G  +V + +    R Q             VA PD+ L+FAP++K R   +VEK VELGV+ + PV+T RT     SDS  + +LG + A+EAAEQ ER+ VP V        +L    E+R       +G D       E+GR LP                L+A+    RD                       A L+GPEGGF   E   +   PFV  V LGP +LRAETAA+ AL+ W A
Sbjct:    5 PRLHVAP-DLAAGTTITIDGDQAHYLSRVMRLGPGDAVRVFNGRDGEFAATISEA---------------GKNAVRVALAEQTREQ-------------VATPDLWLMFAPLKKDRTDFVVEKAVELGVAEIRPVITERTN----SDSVRVDRLGRI-AIEAAEQTERLDVPPVREAQKLWAALEGWAETRTLIFADEAGDDTGRPWGGESGRALP----------------LDAMLRGLRD--------------------GPAAILIGPEGGFSAAERTRLRGLPFVRAVGLGPRILRAETAAVAALAIWQA 248          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A1H4DH21_9RHOB (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H4DH21_9RHOB)

HSP 1 Score: 130 bits (328), Expect = 1.300e-31
Identity = 113/316 (35.76%), Postives = 149/316 (47.15%), Query Frame = 0
Query:  120 APRVYLS-DSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
            AP+V L  D+ L  G  V L   Q  YL +VMRL  G  V +F+G +GE+ A  + +  +GG                LR  +L+R Q        +EG     PD++LIFAPI+K R   + EK  E+G  RL P LT  T    V+  +         AVEAAEQCE ++VP+V   P PL +LL   E+ R                          + VC E   DA P ++AL    R+       SG G            A L+GPEGGF P+E   ++  PFV  VSLGP VLRA+TAA+ AL+ W A
Sbjct:    5 APKVRLFVDAPLGDGAAVALERAQAHYLFTVMRLGQGDAVALFNGRDGEWRAVATEAGRKGGA---------------LRCAALLRPQ--------AEG-----PDLDLIFAPIKKARTDFIAEKACEMGARRLIPCLTRFTNAERVNVERLRAH-----AVEAAEQCEILSVPQVLA-PAPLAALLDAWEAGRR-------------------------LMVCDEA-RDAPPAMDALRAAGRE-----AGSGPG----------PWAVLIGPEGGFAPEERARLSEAPFVTRVSLGPRVLRADTAAVAALALWQA 245          
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A539DJ36_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A539DJ36_9PROT)

HSP 1 Score: 130 bits (328), Expect = 1.300e-31
Identity = 105/316 (33.23%), Postives = 152/316 (48.10%), Query Frame = 0
Query:  121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFW 436
            PR+++ ++ L  G  V L   Q RYL +VMRL  G+PVRVF+G++GE+ A ++ +  RG                 L + +  R Q              A PD+ L+FAP+++    L+VEK  ELGV  L PVLT RT    VS++  L +L  + A+EAAEQ ER+ VP +   P+PL  +L   +  R     V   +A  +  +  G     A           +P+ EAL +                          +A L GPEGGFD +E R + + P+V  VSLGP +LRAETA + AL+   + W
Sbjct:    4 PRLFV-EAPLVAGAAVPLEEGQARYLTAVMRLAPGAPVRVFNGMDGEWAATLAQAGKRG---------------ASLSIGAQTRTQ-------------TAPPDLTLLFAPVKRHGTDLIVEKATELGVRTLQPVLTRRT----VSETVRLERLRAI-AIEAAEQTERLDVPEIAA-PLPLHRILDGWDGERPL---VYADEAADDPSAAWGGAQGRA-----------RPVGEALRDVRA---------------------PALALLTGPEGGFDAEERRLLRSLPYVVPVSLGPRILRAETAVIAALAVIQSSW 249          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y9_9PHAE7.260e-12060.6816S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
D7G8G1_ECTSI1.710e-9858.2516S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A835ZHN8_9STRA2.400e-4239.7916S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
UPI0010745A2F4.920e-3332.8016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A2E4XSR1_9PROT5.450e-3334.82Ribosomal RNA small subunit methyltransferase E n=... [more]
W7TJZ1_9STRA3.830e-3232.8316S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A6I6MNK5_9CAUL7.560e-3233.75Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A258H0U3_9PROT1.010e-3133.76Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A1H4DH21_9RHOB1.300e-3135.76Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A539DJ36_9PROT1.300e-3133.23Ribosomal RNA small subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006700Ribosomal RNA small subunit methyltransferase EPFAMPF04452Methyltrans_RNAcoord: 136..433
e-value: 1.8E-33
score: 115.8
IPR006700Ribosomal RNA small subunit methyltransferase EPANTHERPTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE Ecoord: 119..434
NoneNo IPR availableGENE3D2.40.240.20coord: 122..186
e-value: 2.1E-12
score: 48.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..440
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.78
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 221..341
e-value: 7.5E-14
score: 53.6
coord: 342..439
e-value: 2.3E-16
score: 61.8
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 223..295
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 381..436
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 121..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3643104..3645271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15812.1mRNA_C-linearis_contig8.15812.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3642937..3645357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15812.1 ID=prot_C-linearis_contig8.15812.1|Name=mRNA_C-linearis_contig8.15812.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=441bp
MMIFLLLTLPLVPFLRHADAFVFVPSTKVRLPPQEGPHPSGRGANQYAAG
RPQHRLRGTAEEGSAAHSTENAATAETTPPSAAGPHGTDDLGLAHLDGVA
ASTTDGISTPVPVRSVPTRAPRVYLSDSNLHVGKIVELTTEQTRYLVSVM
RLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVD
SLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVS
RLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVP
LLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAK
PILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEM
RAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006700rRNA_ssu_MeTrfase-E
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases
IPR015947PUA-like_sf