prot_C-linearis_contig8.15812.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE) HSP 1 Score: 367 bits (941), Expect = 7.260e-120 Identity = 213/351 (60.68%), Postives = 252/351 (71.79%), Query Frame = 0
Query: 111 VPVRSVPTRAPRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSS-----------------GRGGM-SRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEY----ARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAAR 439
VP+ S PTRAPRVYL+ +NLHVG+ V+LT EQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAV++SS GRGG R +RS + DK VELRV+ L RRQP G E +DV AP++EL+FAPIRKQRLK++VEK VE+G SRLTPVLTARTQKG+VSD+ L +LG VTAVEAAEQCERM VP V +PV L S L+ +E R+S S +R + LP+ +FVCKERD DA P+LEALAEY + +R+ D +S DG +NA AFL+GPEGGFDPDE+ A+A YPFV FVSLG VLRAETAA+YALSSWSAFWA+R
Sbjct: 134 VPLPSPPTRAPRVYLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKRSTVGADKVVELRVECLTRRQPGIGGGGDGEVEDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPVA-SPVTLASYLRSLELRQSSCDLSSIIGLARDRGGDLS--LPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSSDGS------RNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWASR 475
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI) HSP 1 Score: 306 bits (783), Expect = 1.710e-98 Identity = 180/309 (58.25%), Postives = 214/309 (69.26%), Query Frame = 0
Query: 150 MRLRDGSPVRVFDGVNGEFLAAVSSSS---------------GRGGM-SRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARD-----RQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWA 437
MRLRDG+PVRVFDGVNGEFLAAV++SS GRGG R +RS +K +ELRV+ L RRQP G G E +D+ AP++EL+FAPIRKQRLK++VEK VE+G SRLTPVLTARTQKG+VSD+ L +LG VTAVEAAEQCERM VP + +PV L S L+ +E R S S +R+ + R LP+ +FVCKERD DA P+LEALAEY + RQD SS D +NA AFL+GPEGGFDPDE+ +A YPFV FVSLG VLRAETAA+YALSSWSAFWA
Sbjct: 1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAGGAEKVIELRVECLTRRQPGIGGGGGGEVEDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPMA-SPVTLASYLRSLELRHSSCDGSSIVGLARDRDGD--RSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDN-------RNANAAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWA 299
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.400e-42 Identity = 115/289 (39.79%), Postives = 154/289 (53.29%), Query Frame = 0
Query: 150 MRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAA 438
MRLRDGS VR F+G +GE+L +S + G + S ++ L+V+ +R Q + S A DV L+ API++QR+KL+VEK ELGV+ + PVLTA TQ+ D++ +L L A+EAAEQCER+++P + P PL LL S R +FVC+ER + P+LEALA + R G A AFLVGPEGGF DE +A P++ VSLG VLRAETAA+YALS +S+F AA
Sbjct: 1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRRSAKPALALQVEQQLRSQAEDS---------CADLDVWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEAL--DAEGTSRL-LPIAIEAAEQCERLSLPHLH-PPAPLPELLARWHSEPHTRAR--------------------QLFVCQERSPQSPPLLEALAAASAAR-------------GVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAA 243
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: UPI0010745A2F (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI0010745A2F) HSP 1 Score: 134 bits (338), Expect = 4.920e-33 Identity = 102/311 (32.80%), Postives = 151/311 (48.55%), Query Frame = 0
Query: 122 RVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSW 432
R+Y+ D++L VG +L+++Q Y+ +VMRL+ G V VF+G +GE+L +SS+ K+ +++ IR Q + PD+ L+FAPI+KQRL ++EK ELGVS PV+T RT + + + +EA+EQCER+ +P V V L+ L++D R+ +FV E AKPILE L E+A + A LVGPEGGFDP E+ +A V +S+GP +LRA+TAA+ A+S W
Sbjct: 3 RLYI-DTSLSVGLSQDLSSDQAHYVNNVMRLKVGDEVAVFNGQDGEWLGQISSAR---------------KKNCTIQLIEKIREQD-------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSDFQPVITQRTIASKIRSDRLCAQT-----IEASEQCERLNIPVVHEA-VSLVQLVKDWPQERT-------------------------LFVLNEHGG-AKPILEGLQEFA------------------GKEIGPCAILVGPEGGFDPSELDLLAKLQNVVPLSIGPRILRADTAALAAISCW 234
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT) HSP 1 Score: 134 bits (338), Expect = 5.450e-33 Identity = 109/313 (34.82%), Postives = 150/313 (47.92%), Query Frame = 0
Query: 122 RVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
R+Y+ D L G+ V+L+ Q+ YL V+RL G+ V +F+G +GE+ A + + G L V++ IR Q + PD+ L+FAPI++ RL ++V+K VELGVSRL PVLT RT+ ++ + L +EAAEQCERM +P + P P+L +L D TGR L VC ER A PI + L +D T D A L GPEGGF E+ A F+ FVSLGP +LRAETAA+ A++ W A
Sbjct: 10 RLYV-DQALDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETIRRNAGS---------------LGVETQIRPQ-------------ITEPDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRHRSNL-----IEAAEQCERMTLPEIV-EPRPILDVLSDFP---------------------TGRRL----LVCAERGH-AAPINQIL--------EDDTGEAD-----------RCAILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQA 242
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: W7TJZ1_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ1_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.830e-32 Identity = 108/329 (32.83%), Postives = 164/329 (49.85%), Query Frame = 0
Query: 113 VRSVPTRAPRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKL--GLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFWAAR 439
V S R+PR+Y+ ++ L V ++T+Q YL+ VMRLR G+ VRVF+ +GE++A V+ + M R G S K D + + G G + D + L FAP+++ RLK++ EK E+GV+ L PVLT T + + K+ GLV EAAEQCER+ VP V +P ++ +E R R +++C+ER+ A+PI+E L ++ +D + G + ++GPEGGF P E+ AM +P + VSLGP VLRAETA + A+ + + AR
Sbjct: 150 VSSEVQRSPRLYVPEALLGKHVPVPISTDQRHYLLKVMRLRPGAYVRVFNRRDGEWIAVVADEAPD--MEPKREIGRSDKKRTRRGSDVSLIAKARIREGGGEQRNDEGESKLRLCFAPLKRARLKILFEKATEMGVTHLQPVLTEHTDVAPRHAEEMMKKMEGGLV---EAAEQCERIGVPEV----LPAMTFDALLEEERGGGGR---------------------LYICREREG-ARPIMEVLERDWKEINEDRKN------GKKEEHRGTPSIVIGPEGGFSPRELAAMKGHPRL--VSLGPSVLRAETAGLVAVGVYVTWQEAR 439
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A6I6MNK5_9CAUL (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Terricaulis silvestris TaxID=2686094 RepID=A0A6I6MNK5_9CAUL) HSP 1 Score: 132 bits (331), Expect = 7.560e-32 Identity = 107/317 (33.75%), Postives = 158/317 (49.84%), Query Frame = 0
Query: 121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCT-TRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFW 436
PR+ + D NL G + L Q R++ +V+RL +G +RVF+ +GE+ A VS+ + RG + + VD+L+R A PD++L+FAP+++ L+VEK ELGV R+ PV+T RT + ++ L +L + A EAAEQ ER P + PV L ++ ++ R +G DA E+GR A PI +AL + +G +GG S ++A L+GPEGGF P+E R + A FV VSLGP +LRAETA + ALS + W
Sbjct: 4 PRLLI-DQNLRPGAAIALDEAQARHVGTVLRLDEGDTLRVFNARDGEWSAKVSAKTKRG---------------MIVAVDALLREAR-------------ATPDLDLLFAPVKRHATDLIVEKATELGVRRIRPVITQRT----IVETVRLDRLQSI-AREAAEQTERFDAPEIMD-PVSLAKIVDGWDAARPLIYADEAGDDANAAWGGESGR---------------AAPIAQALLTWTAGVSPAIAGAGRRDAGGPS----KLALLIGPEGGFTPEERRMLRALTFVTPVSLGPRILRAETAVIAALSVIQSTW 266
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A258H0U3_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A258H0U3_9PROT) HSP 1 Score: 131 bits (329), Expect = 1.010e-31 Identity = 106/314 (33.76%), Postives = 145/314 (46.18%), Query Frame = 0
Query: 121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
PR++++ +L G + + +Q YL VMRL G VRVF+G +GEF A +S + G +V + + R Q VA PD+ L+FAP++K R +VEK VELGV+ + PV+T RT SDS + +LG + A+EAAEQ ER+ VP V +L E+R +G D E+GR LP L+A+ RD A L+GPEGGF E + PFV V LGP +LRAETAA+ AL+ W A
Sbjct: 5 PRLHVAP-DLAAGTTITIDGDQAHYLSRVMRLGPGDAVRVFNGRDGEFAATISEA---------------GKNAVRVALAEQTREQ-------------VATPDLWLMFAPLKKDRTDFVVEKAVELGVAEIRPVITERTN----SDSVRVDRLGRI-AIEAAEQTERLDVPPVREAQKLWAALEGWAETRTLIFADEAGDDTGRPWGGESGRALP----------------LDAMLRGLRD--------------------GPAAILIGPEGGFSAAERTRLRGLPFVRAVGLGPRILRAETAAVAALAIWQA 248
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A1H4DH21_9RHOB (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H4DH21_9RHOB) HSP 1 Score: 130 bits (328), Expect = 1.300e-31 Identity = 113/316 (35.76%), Postives = 149/316 (47.15%), Query Frame = 0
Query: 120 APRVYLS-DSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSA 434
AP+V L D+ L G V L Q YL +VMRL G V +F+G +GE+ A + + +GG LR +L+R Q +EG PD++LIFAPI+K R + EK E+G RL P LT T V+ + AVEAAEQCE ++VP+V P PL +LL E+ R + VC E DA P ++AL R+ SG G A L+GPEGGF P+E ++ PFV VSLGP VLRA+TAA+ AL+ W A
Sbjct: 5 APKVRLFVDAPLGDGAAVALERAQAHYLFTVMRLGQGDAVALFNGRDGEWRAVATEAGRKGGA---------------LRCAALLRPQ--------AEG-----PDLDLIFAPIKKARTDFIAEKACEMGARRLIPCLTRFTNAERVNVERLRAH-----AVEAAEQCEILSVPQVLA-PAPLAALLDAWEAGRR-------------------------LMVCDEA-RDAPPAMDALRAAGRE-----AGSGPG----------PWAVLIGPEGGFAPEERARLSEAPFVTRVSLGPRVLRADTAAVAALALWQA 245
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Match: A0A539DJ36_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A539DJ36_9PROT) HSP 1 Score: 130 bits (328), Expect = 1.300e-31 Identity = 105/316 (33.23%), Postives = 152/316 (48.10%), Query Frame = 0
Query: 121 PRVYLSDSNLHVGKIVELTTEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVSSSSGRGGMSRPRRSGLSGDKSVELRVDSLIRRQPDSSNGKGSEGQDVAAPDVELIFAPIRKQRLKLMVEKTVELGVSRLTPVLTARTQKGSVSDSKALGKLGLVTAVEAAEQCERMAVPRVGGTPVPLLSLLQDVESRRSCTTRVSGTDAQGERESETGRLLPEAIFVCKERDTDAKPILEALAEYARDRQDDATSSGDGGSGGNSPQNAEVAFLVGPEGGFDPDEMRAMAAYPFVCFVSLGPLVLRAETAAMYALSSWSAFW 436
PR+++ ++ L G V L Q RYL +VMRL G+PVRVF+G++GE+ A ++ + RG L + + R Q A PD+ L+FAP+++ L+VEK ELGV L PVLT RT VS++ L +L + A+EAAEQ ER+ VP + P+PL +L + R V +A + + G A +P+ EAL + +A L GPEGGFD +E R + + P+V VSLGP +LRAETA + AL+ + W
Sbjct: 4 PRLFV-EAPLVAGAAVPLEEGQARYLTAVMRLAPGAPVRVFNGMDGEWAATLAQAGKRG---------------ASLSIGAQTRTQ-------------TAPPDLTLLFAPVKRHGTDLIVEKATELGVRTLQPVLTRRT----VSETVRLERLRAI-AIEAAEQTERLDVPEIAA-PLPLHRILDGWDGERPL---VYADEAADDPSAAWGGAQGRA-----------RPVGEALRDVRA---------------------PALALLTGPEGGFDAEERRLLRSLPYVVPVSLGPRILRAETAVIAALAVIQSSW 249 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig8.15812.1 ID=prot_C-linearis_contig8.15812.1|Name=mRNA_C-linearis_contig8.15812.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=441bpback to top |