prot_C-linearis_contig8.15810.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15810.1
Unique Name	prot_C-linearis_contig8.15810.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	795

Homology

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI)

HSP 1 Score: 668 bits (1724), Expect = 1.720e-228
Identity = 468/831 (56.32%), Postives = 528/831 (63.54%), Query Frame = 0

Query:    1 MAGRERHAGGGKDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSA---NGGAAGTRRPG-EVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKRQVKVKSVPLPAPKPRGYSPP---TKTGVASPRPAHLAGPAPAPDGTAVGAVSATNTSAQVTGSQDETVAPFSSVLRQSRDSHADGESNVSSYQARTTVEELPEEAGASLPAPSPTXXXXXXXXXXXXXALL-AASNSAASQE--------------------DPATETALGSPGIGGEEAAAAGPTTKTANTGMTRPAAXXXXXXXXXXXXXXXXXXXXXXXXXAAEAEPGRPVVSPAAESDQG-------DVDAKQASNTGDAGGGDNT---GSVPREEVLGGETALSSPPLNGRTEAEDKGKAAPLPTARPP-PSTDSSSPGSTTHAALQLPTTGYQFELVWRSADGLPEARLELLRAVPPSSVAKFFRRTPIEVDLLGGVLRGLGEAFLPRKPATALRWLKSLSKACRFGMTVALLGEADGRAAAREVLTRLEAAPKAKVDPQDVEVLRKQF 792
            M G+  H   GKDGPGAAAFR+Q QIRRNAQDMQEYLT+L SWEKS+KKKD+QLSRKA + SSS  S  ++   DTGTPPIRP G TVPVSSGPAP+ S+ T K    S    N GA G  RP   V+A +  GA G SG  KAKSS+SAAGHTYDKGY KW KFDIDAA+RSVD+EE+   ++KR                   Q TPRLTPATMVDRS SRG RR           +    ++SPRDLEKEERE+GN KFGQGDFEGAVK YTRC+G NSKSSLAFSNRAMA LKLKEFGKAE+D D+ALR+DPRHVKSLQ+RA ARNALGKHRAAL DLQTAAEID +SKQV KDLSKTLETLKTVVRRAPK  V+V+S PLPAPKPRGYS P    + GV              P   A  AVSATN +A VTG +D T AP+SSVL++S D  A  E+ V SYQART VEELP+EA A+L  P PT               L  AS + A+Q                     DPA +T    P I   E    G  TKT   G   P+                           A A   RP VS    S  G       DV AK  +    AGG DN    G+ P +E        + P L  RT  EDK   AP  T +   PST + +  +T HA LQLPTTGYQFE +WR  DG PE RLELLRAVPPS++AK FRRTPIEV+LLGGVL+ LG+AFLPR+PATALRWLKSLSKA RF MTVALLGE DGRAAAREVL RLEAA   KVDP+DV+VLRKQF
Sbjct:    1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSS--SGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADG--RPHINVNAANGGGATGDSG--KAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXX----XXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGV--------------PPTVANAAVSATNHNASVTGDED-TAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDT----PKIATVE----GSLTKTTTPGAATPSEATD----------------------VAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHPVKEEA------TCPSLEART--EDKELCAPTQTPQQGRPSTPAPACRATAHA-LQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQF 767

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD)

HSP 1 Score: 164 bits (414), Expect = 1.580e-39
Identity = 121/359 (33.70%), Postives = 173/359 (48.19%), Query Frame = 0

Query:   14 GPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            G  A+  ++Q QIR NA  +Q+Y ++L SWEKS+ +++                 +           ++ A D  PV             +G  DSAN                         +  A +    AGHTYDKGYSKW KFD+DAA+R  D+                    DS +               +  ++V                  A   T+S  +LE+E+   GNA + +GD+  A+KCYTRC+G N  +++  SNRAMA LK +EFGKAE DC+ AL++DP H+KSL RR TARN+LGKHR AL D + AAE+D  S+Q+   ++ T E ++T ++RAPKR
Sbjct:    5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRAPRRR------VQQATDATPV-------------EGDGDSAN-------------------------DKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADE--------------------DSTSXXXXXXXXXXXXXXXLSSKAV--------VVEETEPAAKASATTKSREELERED---GNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKR 288

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT)

HSP 1 Score: 160 bits (404), Expect = 1.630e-38
Identity = 122/351 (34.76%), Postives = 170/351 (48.43%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +Q QIR NA  +Q+Y ++L +WEKS+ K+D  + ++AT           + A  + TPP  P            PR + +   G  D          R   +  +D                     HTYDKGY +W+KFD+D A++  D+E D       CK+ N +  +     G          P  M   SVS                     T+S  +LEKEE   GNA + +GD+  A+K YTRC+G N ++++  SNRAMA LK +E+  AE DC  ALR DP H KS  RR TARN+LGKHR AL D Q AA +D  S+Q+ K L  T E ++T ++R+ KR
Sbjct:    7 MQHQIRANASQLQDYFSDLYAWEKSIDKED-SMRKRAT-----------KTAKSSATPPAAPP-----------PRVATTVGVGSSDE-------NARTVSLKKLD--------------------AHTYDKGYKRWEKFDVDTALKEADEEGD-------CKQKNKQPSALVQPSGS--------APTAMAKTSVSSTT------------------TKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSKR 271

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 5.260e-38
Identity = 127/352 (36.08%), Postives = 175/352 (49.72%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPA-GDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +Q QIR NA  +Q+Y ++L +WEKS+ K+D   +RK  A+      T ++ A    TPP R A G+ V              N    D  NG     ++P                            HTYDKGY++W+KFD+DAA++  D  ED  T   + K G                 +P L  + +  R V+                 A P T+S  +LEKE    GNA + +GD+  A+K YTRC+G N ++++  SNRAMA LK +EF  AE DC  AL+ DP HVKS  RR TARN+LGKHR AL D Q AA +D  S+Q+   +  T E ++T ++RAPKR
Sbjct:   14 VQHQIRANASQLQDYFSDLYAWEKSIGKED--SARKRAAK------TTKKPATAGATPPPRGARGNGV------------GRNNEAADGVNG-----KKPDS--------------------------HTYDKGYNRWEKFDVDAALKEAD--EDAST---KTKSG---------------AASPPLQSSPVPRRVVA-----------------ASPSTKSREELEKEG---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPKR 274

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL)

HSP 1 Score: 157 bits (397), Expect = 1.850e-37
Identity = 123/355 (34.65%), Postives = 176/355 (49.58%), Query Frame = 0

Query:   18 AAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +  ++Q QIR NA ++Q+Y ++L +WEK+++KK+     +AT    ST  T+Q   L  G         T  VS  P                         P  ++ V+        G +K      A  HTYDKGY KWDKFD+DAA++  D +      EK+  +                + T    P   V      G                  PT+S  D+E+EE   GN  + +GD+  A+K YTRC+G NS++++  SNRAMA LK +E+ KAE DC  AL++D  HVKS  RR TARNALGKHR AL D + A E+D  SKQ+   ++ T E+++T ++RAPK+
Sbjct:   16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKE-----EATK---STAMTKQNVPLPRGQ-------KTATVSLTP----------------------ISAPEAIAPVE--------GPTK-----KADAHTYDKGYKKWDKFDVDAALQEADGDHSA---EKQSAQ---------------AETTTTSLPTKKVVAKPKIGS----------------VPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPKK 283

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR)

HSP 1 Score: 154 bits (390), Expect = 2.370e-37
Identity = 117/351 (33.33%), Postives = 161/351 (45.87%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +Q QIR NA  +Q+Y ++L +WEK++ K+D    R A    S T                          + P PR +      G+DS           GE  +  NE                   HTYDKGY +W+KFD+DAA++  D++E  +   K+                                 SV   G              A   T++  +LEKEE   GNA + +GD+  A+K YTRC+G N ++++  SNRAMA LK +EF  AE DC  AL+ DP HVKS  RR TARNALGKHR AL D   AA +D  S+Q+   L  T   ++T ++R+PKR
Sbjct:   12 VQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPT------------------------AIAAPPPRTATII---GVDS----------NGEKVSTANE--------------KKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQ------------------------------QSASVQASGTGPSRVTATSNIPAASTTTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKR 278

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM)

HSP 1 Score: 157 bits (396), Expect = 3.350e-37
Identity = 129/351 (36.75%), Postives = 171/351 (48.72%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +Q QIR NA  +Q+Y ++L +WEKS+ K+D   +RK  AR++         +LD  TPP R A                                      V  V N   +  SGE  A        HTYDKGY +W+KFD+DAA+R  D                          G         +PA+ V R V      XXXXXX          T+S  +LEKEE   GNA + +GD+  AVK YTRC+G N ++++  SNRAMA LK +EF  AE DC  AL+ +P HVKS  RR TARN+LGKHR AL D   AA +D  S+Q+   L  T + ++T ++R+PKR
Sbjct:    9 VQHQIRSNASQLQDYFSDLYAWEKSIDKED--SARKRAARTTK--------SLDA-TPPPRTA-------------------------------------TVVGVGNNSES--SGEGDATDGKQPGAHTYDKGYKRWEKFDVDAALREAD-------------------------GGGSAVPIVEDSPASSVPRRVXXXXXXXXXXXX----------TKSREELEKEE---GNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHVKSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPKR 271

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A485LQS8_9STRA (Aste57867_22806 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQS8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.440e-36
Identity = 133/360 (36.94%), Postives = 192/360 (53.33%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQL--SRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKRQVKVKSV 379
            IQ QIR NA  +Q+Y ++L +WEKS+ KK++QL  S++ TA                   P+R A   V ++     R S+ T              T  P  ++A  +      + E+  K + + A H YDKGY KWD FD+DAA++ VD                              + +P+  P    D +  +  R+ XXXXXXXXXX        PR+L   E+E GN  F +G++  AV CY+R +    ++++  SNRAMA LKL++F KAE+DCD ALR+D  HVKSL RRATARNALGKH AALADL+ A E++ S+K +   L++T + LK  ++R+P   ++V +V
Sbjct:    6 IQHQIRENASYLQDYFSDLSAWEKSMAKKEQQLQSSKRPTA-------------------PVRKA---VAMNV----RGSQGTIS------------THHP--INATMH------TPETSTKLTKAPAQHVYDKGYKKWDTFDVDAALQEVD-----------------------------ARPSPQPAPEAEDDDTPVQPRRKAXXXXXXXXXXXXXXXXSMPRELL--EKEDGNMHFKKGEYASAVACYSRSLSYQPRNAVVLSNRAMAHLKLQQFAKAESDCDLALRIDAAHVKSLVRRATARNALGKHHAALADLEAALEVEPSNKTIATQLAQTRDQLKHAIKRSPTVGIEVHTV 288

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN)

HSP 1 Score: 154 bits (390), Expect = 2.050e-36
Identity = 117/351 (33.33%), Postives = 161/351 (45.87%), Query Frame = 0

Query:   22 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            +Q QIR NA  +Q+Y ++L +WEK++ K+D    R A    S T                          + P PR +      G+DS           GE  +  NE                   HTYDKGY +W+KFD+DAA++  D++E  +   K+                                 SV   G              A   T++  +LEKEE   GNA + +GD+  A+K YTRC+G N ++++  SNRAMA LK +EF  AE DC  AL+ DP HVKS  RR TARNALGKHR AL D   AA +D  S+Q+   L  T   ++T ++R+PKR
Sbjct:   12 VQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPT------------------------AIAAPPPRTATII---GVDS----------NGEKVSTANE--------------KKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQ------------------------------QSASVQASGTGPSRVTATSNIPAASTTTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKR 278

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BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.300e-35
Identity = 120/361 (33.24%), Postives = 173/361 (47.92%), Query Frame = 0

Query:   12 KDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 372
            K+   ++   +Q QIR NA  +Q+Y ++L +WE ++ K++       +AR  +T                + A  +V  ++ P PR +     G               GE     NE                   HTYDKGY +WDKFD+DAA++  D+E   R   ++           S +  + +  +  L  AT    S S                     T+S  +LEKEE   GNA + +GD+  A+K YTRC+G N ++++  SNRAMA LK +EF  AE DC  AL+ DP HVKS  RR TARN+LGKHR AL D Q AA +D  S+Q+   L  T E ++T ++R+PKR
Sbjct:   22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKEN-------SARKRAT----------------KTAKSSVAANAAPPPRVATIVGVGSN-------------GEELYAGNE--------------KKLDEHTYDKGYKRWDKFDVDAALKEADEEAGIRQKSEQA----------SASASEQSSGSAPLRVATTSKASTSST-------------------TKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPKR 300

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8F8_ECTSI	1.720e-228	56.32	RPAP3_C domain-containing protein n=2 Tax=Ectocarp...	[more]
K3WL17_GLOUD	1.580e-39	33.70	RPAP3_C domain-containing protein n=1 Tax=Globispo...	[more]
D0MU02_PHYIT	1.630e-38	34.76	RNA polymerase II-associated protein, putative n=1...	[more]
A0A6A4EVA2_9STRA	5.260e-38	36.08	RPAP3_C domain-containing protein n=4 Tax=Phytopht...	[more]
A0A8K1FBG6_PYTOL	1.850e-37	34.65	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A081B1U1_PHYPR	2.370e-37	33.33	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
H3GE50_PHYRM	3.350e-37	36.75	RPAP3_C domain-containing protein n=1 Tax=Phytopht...	[more]
A0A485LQS8_9STRA	1.440e-36	36.94	Aste57867_22806 protein n=1 Tax=Aphanomyces stella...	[more]
W2RGZ7_PHYPN	2.050e-36	33.33	RPAP3_C domain-containing protein n=11 Tax=Phytoph...	[more]
A0A329RPX3_9STRA	1.300e-35	33.24	RPAP3_C domain-containing protein n=2 Tax=Phytopht...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 247..280 e-value: 6.2 score: 15.8 coord: 315..348 e-value: 2.3 score: 17.2 coord: 281..314 e-value: 2.4E-5 score: 33.8
IPR025986	RNA-polymerase II-associated protein 3-like, C-terminal domain	PFAM	PF13877	RPAP3_C	coord: 671..759 e-value: 5.5E-11 score: 42.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 239..380 e-value: 5.7E-35 score: 122.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 251..363
None	No IPR available	PANTHER	PTHR46423	FAMILY NOT NAMED	coord: 18..792
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 247..348 score: 15.257

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:3625625..3630537 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15810.1	mRNA_C-linearis_contig8.15810.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 3625613..3630546 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15810.1 ID=prot_C-linearis_contig8.15810.1|Name=mRNA_C-linearis_contig8.15810.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=795bp
MAGRERHAGGGKDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKK
DRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASE
STNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHT
YDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDD
TQETPRLTPATMVDRSVSRGGRRPPPPKAAPPPPTAIPPTRSPRDLEKEE
RERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKA
EADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQ
VWKDLSKTLETLKTVVRRAPKRQVKVKSVPLPAPKPRGYSPPTKTGVASP
RPAHLAGPAPAPDGTAVGAVSATNTSAQVTGSQDETVAPFSSVLRQSRDS
HADGESNVSSYQARTTVEELPEEAGASLPAPSPTPAAAPTDAAASGSALL
AASNSAASQEDPATETALGSPGIGGEEAAAAGPTTKTANTGMTRPAAASE
TTPAGDDAARSPEAAVVAATAAAAEAEPGRPVVSPAAESDQGDVDAKQAS
NTGDAGGGDNTGSVPREEVLGGETALSSPPLNGRTEAEDKGKAAPLPTAR
PPPSTDSSSPGSTTHAALQLPTTGYQFELVWRSADGLPEARLELLRAVPP
SSVAKFFRRTPIEVDLLGGVLRGLGEAFLPRKPATALRWLKSLSKACRFG
MTVALLGEADGRAAAREVLTRLEAAPKAKVDPQDVEVLRKQFLV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR025986	RPAP3-like_C
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom