mRNA_C-linearis_contig8.15810.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI) HSP 1 Score: 667 bits (1720), Expect = 8.760e-228 Identity = 468/831 (56.32%), Postives = 528/831 (63.54%), Query Frame = 1
Query: 10 MAGRERHAGGGKDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSA---NGGAAGTRRPG-EVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKRQVKVKSVPLPAPKPRGYSPP---TKTGVASPRPAHLAGPAPAPDGTAVGAVSATNTSAQVTGSQDETVAPFSSVLRQSRDSHADGESNVSSYQARTTVEELPEEAGASLPAPSPTXXXXXXXXXXXXXALL-AASNSAASQE--------------------DPATETALGSPGIGGEEAAAAGPTTKTANTGMTRPAAXXXXXXXXXXXXXXXXXXXXXXXXXAAEAEPGRPVVSPAAESDQG-------DVDAKQASNTGDAGGGDNT---GSVPREEVLGGETALSSPPLNGRTEAEDKGKAAPLPTARPP-PSTDSSSPGSTTHAALQLPTTGYQFELVWRSADGLPEARLELLRAVPPSSVAKFFRRTPIEVDLLGGVLRGLGEAFLPRKPATALRWLKSLSKACRFGMTVALLGEADGRAAAREVLTRLEAAPKAKVDPQDVEVLRKQF 2385
M G+ H GKDGPGAAAFR+Q QIRRNAQDMQEYLT+L SWEKS+KKKD+QLSRKA + SSS S ++ DTGTPPIRP G TVPVSSGPAP+ S+ T K S N GA G RP V+A + GA G SG KAKSS+SAAGHTYDKGY KW KFDIDAA+RSVD+EE+ ++KR Q TPRLTPATMVDRS SRG RR + ++SPRDLEKEERE+GN KFGQGDFEGAVK YTRC+G NSKSSLAFSNRAMA LKLKEFGKAE+D D+ALR+DPRHVKSLQ+RA ARNALGKHRAAL DLQTAAEID +SKQV KDLSKTLETLKTVVRRAPK V+V+S PLPAPKPRGYS P + GV P A AVSATN +A VTG +D T AP+SSVL++S D A E+ V SYQART VEELP+EA A+L P PT L AS + A+Q DPA +T P I E G TKT G P+ A A RP VS S G DV AK + AGG DN G+ P +E + P L RT EDK AP T + PST + + +T HA LQLPTTGYQFE +WR DG PE RLELLRAVPPS++AK FRRTPIEV+LLGGVL+ LG+AFLPR+PATALRWLKSLSKA RF MTVALLGE DGRAAAREVL RLEAA KVDP+DV+VLRKQF
Sbjct: 1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSS--SGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADG--RPHINVNAANGGGATGDSG--KAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXX----XXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGV--------------PPTVANAAVSATNHNASVTGDED-TAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDT----PKIATVE----GSLTKTTTPGAATPSEATD----------------------VAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHPVKEEA------TCPSLEART--EDKELCAPTQTPQQGRPSTPAPACRATAHA-LQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQF 767
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD) HSP 1 Score: 164 bits (414), Expect = 1.650e-39 Identity = 121/359 (33.70%), Postives = 173/359 (48.19%), Query Frame = 1
Query: 49 GPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
G A+ ++Q QIR NA +Q+Y ++L SWEKS+ +++ + ++ A D PV +G DSAN + A + AGHTYDKGYSKW KFD+DAA+R D+ DS + + ++V A T+S +LE+E+ GNA + +GD+ A+KCYTRC+G N +++ SNRAMA LK +EFGKAE DC+ AL++DP H+KSL RR TARN+LGKHR AL D + AAE+D S+Q+ ++ T E ++T ++RAPKR
Sbjct: 5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRAPRRR------VQQATDATPV-------------EGDGDSAN-------------------------DKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADE--------------------DSTSXXXXXXXXXXXXXXXLSSKAV--------VVEETEPAAKASATTKSREELERED---GNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKR 288
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT) HSP 1 Score: 160 bits (404), Expect = 1.690e-38 Identity = 122/351 (34.76%), Postives = 170/351 (48.43%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+Q QIR NA +Q+Y ++L +WEKS+ K+D + ++AT + A + TPP P PR + + G D R + +D HTYDKGY +W+KFD+D A++ D+E D CK+ N + + G P M SVS T+S +LEKEE GNA + +GD+ A+K YTRC+G N ++++ SNRAMA LK +E+ AE DC ALR DP H KS RR TARN+LGKHR AL D Q AA +D S+Q+ K L T E ++T ++R+ KR
Sbjct: 7 MQHQIRANASQLQDYFSDLYAWEKSIDKED-SMRKRAT-----------KTAKSSATPPAAPP-----------PRVATTVGVGSSDE-------NARTVSLKKLD--------------------AHTYDKGYKRWEKFDVDTALKEADEEGD-------CKQKNKQPSALVQPSGS--------APTAMAKTSVSSTT------------------TKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSKR 271
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.460e-38 Identity = 127/352 (36.08%), Postives = 175/352 (49.72%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPA-GDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+Q QIR NA +Q+Y ++L +WEKS+ K+D +RK A+ T ++ A TPP R A G+ V N D NG ++P HTYDKGY++W+KFD+DAA++ D ED T + K G +P L + + R V+ A P T+S +LEKE GNA + +GD+ A+K YTRC+G N ++++ SNRAMA LK +EF AE DC AL+ DP HVKS RR TARN+LGKHR AL D Q AA +D S+Q+ + T E ++T ++RAPKR
Sbjct: 14 VQHQIRANASQLQDYFSDLYAWEKSIGKED--SARKRAAK------TTKKPATAGATPPPRGARGNGV------------GRNNEAADGVNG-----KKPDS--------------------------HTYDKGYNRWEKFDVDAALKEAD--EDAST---KTKSG---------------AASPPLQSSPVPRRVVA-----------------ASPSTKSREELEKEG---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPKR 274
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL) HSP 1 Score: 157 bits (397), Expect = 1.910e-37 Identity = 123/355 (34.65%), Postives = 176/355 (49.58%), Query Frame = 1
Query: 61 AAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+ ++Q QIR NA ++Q+Y ++L +WEK+++KK+ +AT ST T+Q L G T VS P P ++ V+ G +K A HTYDKGY KWDKFD+DAA++ D + EK+ + + T P V G PT+S D+E+EE GN + +GD+ A+K YTRC+G NS++++ SNRAMA LK +E+ KAE DC AL++D HVKS RR TARNALGKHR AL D + A E+D SKQ+ ++ T E+++T ++RAPK+
Sbjct: 16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKE-----EATK---STAMTKQNVPLPRGQ-------KTATVSLTP----------------------ISAPEAIAPVE--------GPTK-----KADAHTYDKGYKKWDKFDVDAALQEADGDHSA---EKQSAQ---------------AETTTTSLPTKKVVAKPKIGS----------------VPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPKK 283
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR) HSP 1 Score: 154 bits (390), Expect = 2.440e-37 Identity = 117/351 (33.33%), Postives = 161/351 (45.87%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+Q QIR NA +Q+Y ++L +WEK++ K+D R A S T + P PR + G+DS GE + NE HTYDKGY +W+KFD+DAA++ D++E + K+ SV G A T++ +LEKEE GNA + +GD+ A+K YTRC+G N ++++ SNRAMA LK +EF AE DC AL+ DP HVKS RR TARNALGKHR AL D AA +D S+Q+ L T ++T ++R+PKR
Sbjct: 12 VQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPT------------------------AIAAPPPRTATII---GVDS----------NGEKVSTANE--------------KKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQ------------------------------QSASVQASGTGPSRVTATSNIPAASTTTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKR 278
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM) HSP 1 Score: 157 bits (396), Expect = 3.470e-37 Identity = 129/351 (36.75%), Postives = 171/351 (48.72%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+Q QIR NA +Q+Y ++L +WEKS+ K+D +RK AR++ +LD TPP R A V V N + SGE A HTYDKGY +W+KFD+DAA+R D G +PA+ V R V XXXXXX T+S +LEKEE GNA + +GD+ AVK YTRC+G N ++++ SNRAMA LK +EF AE DC AL+ +P HVKS RR TARN+LGKHR AL D AA +D S+Q+ L T + ++T ++R+PKR
Sbjct: 9 VQHQIRSNASQLQDYFSDLYAWEKSIDKED--SARKRAARTTK--------SLDA-TPPPRTA-------------------------------------TVVGVGNNSES--SGEGDATDGKQPGAHTYDKGYKRWEKFDVDAALREAD-------------------------GGGSAVPIVEDSPASSVPRRVXXXXXXXXXXXX----------TKSREELEKEE---GNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHVKSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPKR 271
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A485LQS8_9STRA (Aste57867_22806 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQS8_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.480e-36 Identity = 133/360 (36.94%), Postives = 192/360 (53.33%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQL--SRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKRQVKVKSV 1146
IQ QIR NA +Q+Y ++L +WEKS+ KK++QL S++ TA P+R A V ++ R S+ T T P ++A + + E+ K + + A H YDKGY KWD FD+DAA++ VD + +P+ P D + + R+ XXXXXXXXXX PR+L E+E GN F +G++ AV CY+R + ++++ SNRAMA LKL++F KAE+DCD ALR+D HVKSL RRATARNALGKH AALADL+ A E++ S+K + L++T + LK ++R+P ++V +V
Sbjct: 6 IQHQIRENASYLQDYFSDLSAWEKSMAKKEQQLQSSKRPTA-------------------PVRKA---VAMNV----RGSQGTIS------------THHP--INATMH------TPETSTKLTKAPAQHVYDKGYKKWDTFDVDAALQEVD-----------------------------ARPSPQPAPEAEDDDTPVQPRRKAXXXXXXXXXXXXXXXXSMPRELL--EKEDGNMHFKKGEYASAVACYSRSLSYQPRNAVVLSNRAMAHLKLQQFAKAESDCDLALRIDAAHVKSLVRRATARNALGKHHAALADLEAALEVEPSNKTIATQLAQTRDQLKHAIKRSPTVGIEVHTV 288
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN) HSP 1 Score: 154 bits (390), Expect = 2.120e-36 Identity = 117/351 (33.33%), Postives = 161/351 (45.87%), Query Frame = 1
Query: 73 IQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
+Q QIR NA +Q+Y ++L +WEK++ K+D R A S T + P PR + G+DS GE + NE HTYDKGY +W+KFD+DAA++ D++E + K+ SV G A T++ +LEKEE GNA + +GD+ A+K YTRC+G N ++++ SNRAMA LK +EF AE DC AL+ DP HVKS RR TARNALGKHR AL D AA +D S+Q+ L T ++T ++R+PKR
Sbjct: 12 VQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPT------------------------AIAAPPPRTATII---GVDS----------NGEKVSTANE--------------KKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQ------------------------------QSASVQASGTGPSRVTATSNIPAASTTTKTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKR 278
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.340e-35 Identity = 120/361 (33.24%), Postives = 173/361 (47.92%), Query Frame = 1
Query: 43 KDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKDRQLSRKATARSSSTHSTQQQGALDTGTPPIRPAGDTVPVSSGPAPRASESTNKGGIDSANGGAAGTRRPGEVSAVDNEGAAGGSGESKAKSSVSAAGHTYDKGYSKWDKFDIDAAMRSVDKEEDGRTDEKRCKEGNNRNGSDSDTDGDDTQETPRLTPATMVDRSVSRGGRRXXXXXXXXXXXTAIPPTRSPRDLEKEERERGNAKFGQGDFEGAVKCYTRCIGTNSKSSLAFSNRAMACLKLKEFGKAEADCDSALRLDPRHVKSLQRRATARNALGKHRAALADLQTAAEIDASSKQVWKDLSKTLETLKTVVRRAPKR 1125
K+ ++ +Q QIR NA +Q+Y ++L +WE ++ K++ +AR +T + A +V ++ P PR + G GE NE HTYDKGY +WDKFD+DAA++ D+E R ++ S + + + + L AT S S T+S +LEKEE GNA + +GD+ A+K YTRC+G N ++++ SNRAMA LK +EF AE DC AL+ DP HVKS RR TARN+LGKHR AL D Q AA +D S+Q+ L T E ++T ++R+PKR
Sbjct: 22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKEN-------SARKRAT----------------KTAKSSVAANAAPPPRVATIVGVGSN-------------GEELYAGNE--------------KKLDEHTYDKGYKRWDKFDVDAALKEADEEAGIRQKSEQA----------SASASEQSSGSAPLRVATTSKASTSST-------------------TKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPKR 300 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15810.1 >prot_C-linearis_contig8.15810.1 ID=prot_C-linearis_contig8.15810.1|Name=mRNA_C-linearis_contig8.15810.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=795bp MAGRERHAGGGKDGPGAAAFRIQSQIRRNAQDMQEYLTELGSWEKSVKKKback to top mRNA from alignment at C-linearis_contig8:3625613..3630546- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15810.1 ID=mRNA_C-linearis_contig8.15810.1|Name=mRNA_C-linearis_contig8.15810.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4934bp|location=Sequence derived from alignment at C-linearis_contig8:3625613..3630546- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:3625613..3630546- >mRNA_C-linearis_contig8.15810.1 ID=mRNA_C-linearis_contig8.15810.1|Name=mRNA_C-linearis_contig8.15810.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4770bp|location=Sequence derived from alignment at C-linearis_contig8:3625613..3630546- (Chordaria linearis ClinC8C monoicous)back to top |