prot_C-linearis_contig8.15626.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: D7FJF4_ECTSI (Signal recognition particle receptor subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF4_ECTSI) HSP 1 Score: 386 bits (991), Expect = 2.200e-130 Identity = 216/296 (72.97%), Postives = 236/296 (79.73%), Query Frame = 0
Query: 73 VSGGVEQALASSKENAITALSLLDSLLASLGPFLAEHGLPSASIVLGGVAIAVLFLLFLSQVGIGGGGGRTSK-KRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCS------------SADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLAAQVAAGAELLYDVLTDPSLEGCRGLMLALSKSDLKEAKAPRAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFVRASL 355
++G V QALAS+ + A LS L+SLLASL FLAE+GLPSAS+V GVAIA+ L+ L +VGI KRKGVVLFLGPCGSGKTAMCYRLSHGG V T TSMEACRYPCS R S SA + LVDYPGH RLRGGVG+ELRGADR+VFMLDGS LAAQVAAGAELLYDVLTDPSLEGC+GLMLAL+KSDLKEAKA RAK LLQKELDKLRGTRGMLGTQGEEDDMP A+ALGRPGQPFSLE+DSPCEVV AGCSV KEGGL+SV++FVRASL
Sbjct: 66 IAGVVAQALASNSDKAAAVLSQLESLLASLESFLAEYGLPSASLVFPGVAIAIFLLVLLGKVGIXXXXXXXXXXKRKGVVLFLGPCGSGKTAMCYRLSHGG---ETGLVPTATSMEACRYPCSSGRLSELLARNGNGPSSSARSGSLVDYPGHERLRGGVGEELRGADRVVFMLDGSCLAAQVAAGAELLYDVLTDPSLEGCQGLMLALNKSDLKEAKASRAKTLLQKELDKLRGTRGMLGTQGEEDDMPVAMALGRPGQPFSLEVDSPCEVVVAGCSVAKEGGLDSVVDFVRASL 358
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A835YTM3_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM3_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.070e-36 Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0
Query: 199 SSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLAAQVAAGAELLYDVLTDPSLEGCRGLMLALSKSDLKEAKAPRAKMLLQKELDKLRGTRGMLGTQGEEDD--MPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFV 351
SS + + D+PGH RLRGG+ EL + ++FMLDG+ L++QV G E+LYD+LTD S+E C+GL + SK+DLK AK R + L KEL++LR TR +G QGEED S + LGR GQP L +D PC + CSV EG L +V +F+
Sbjct: 20 SSKGSVTVTDFPGHERLRGGLRGELATSTAVIFMLDGTDLSSQVRLGGEMLYDILTDSSIERCKGLAIGCSKADLKVAKPDRVRAALTKELEQLRTTRWSIGMQGEEDTGRPNSFIPLGRQGQPLDLVVDCPCPLTVFTCSVKGEG-LNAVRDFI 173
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A6G0XMT9_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMT9_9STRA) HSP 1 Score: 124 bits (311), Expect = 6.110e-30 Identity = 90/237 (37.97%), Postives = 135/237 (56.96%), Query Frame = 0
Query: 121 VAIAVLFLL--FLSQVGIGGGGGRTSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLA--AQVAAGAELLYDVLTDPSL-EGCRGLMLALSKSDLKEAKAP-RAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFV 351
VA VL LL F+ ++ G G R ++ V+L LGPCGSGKTA+ +RL G A +V TVTSM+ P ++D+PGH RLR Q A +IVF++D ++++ QV AE L+D+ T P L + +++A SK+D A AP R ++LL+ EL +L+GTR L TQ +++ +P LGR PF+ ++D+PCEVV S+ G+ +L+F+
Sbjct: 16 VAGVVLLLLVAFIIKLAASGSGPRG---KRDVILLLGPCGSGKTALFHRLRDG-----AVSVETVTSMKE-TMETFPLHDEETANVSVLDFPGHERLRSQAPQFYPIAKKIVFIVDATTVSDPLQVRKAAEFLFDIFTHPKLNDNGIPVLIACSKADQATAAAPSRIQLLLEAELTQLKGTRASLDTQDDDESIP----LGRENVPFAFDVDAPCEVVFESYSIHTPNGVAPLLDFI 239
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A1V9ZHQ0_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHQ0_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.640e-29 Identity = 88/241 (36.51%), Postives = 130/241 (53.94%), Query Frame = 0
Query: 119 GGVAIAVLFLLFLSQVGIGGGGGRTSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEAC--RYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSL--AAQVAAGAELLYDVLTDPSLEGCR-GLMLALSKSD-LKEAKAPRAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFVRA 353
G A A L L F+ GG G S KR +VL +GPCG+GKTA+ +RL G + V TVTSM+ ++P + T + D+PGH R+R GQ A +I+F++D ++ A + AE LYD+ T P + +M+A SKSD K A + + LL+ EL +L+ TR L GE+D+ ++ LGR PF+ +ID+PCEV S+V L +L+F+ +
Sbjct: 14 GAAAGAALVLFFVLLKLCSGGSGIRSSKRD-IVLLVGPCGAGKTALFHRLRDG-----PTKVTTVTSMKETMEKFPLFDEENA---TFNICDFPGHERMRSQAGQFYPIAKKIIFVVDSTTANDAGHIRKAAEFLYDIFTHPKVNDAGVPVMIACSKSDETKAATSATVRSLLESELTQLKSTRASLEAHGEDDE---SIPLGRDNAPFAFDIDAPCEVTFENYSIVTPEALNPLLDFIMS 242
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A024TLZ7_9STRA (Signal recognition particle receptor subunit beta n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLZ7_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.760e-27 Identity = 87/235 (37.02%), Postives = 127/235 (54.04%), Query Frame = 0
Query: 121 VAIAVLFLLFLSQVGIGGGGGRTSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSL--AAQVAAGAELLYDVLTDPSL-EGCRGLMLALSKSDLKEAKAP-RAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFV 351
VA AVL LL + + G KR V+L LGPCG GKTA+ +RL G S V TVTSM+ P A T ++D+PGH RLR V Q A ++VF++D +++ AAQV AE LYD+ P + + L++A SK+D+ A P + LL+ EL +L+ TR L +++ +P LGR PF+ ++D+PCEVV S+ + +L+F+
Sbjct: 16 VAGAVLVLLLAFIIKLAASGSSPGGKRD-VILLLGPCGGGKTALFHRLRDG-----PSKVDTVTSMKE-TLETFPLFDEEAATVSVLDFPGHERLRSQVSQFYPIAKKLVFVVDATTVGDAAQVRKAAEFLYDIFVHPKVHDNGIPLLVACSKADVATAATPSHIQSLLETELSQLKSTRASLEAHDDDESIP----LGRENVPFAFDVDAPCEVVFESYSIHSAEAIAPLLDFI 239
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A485KDV8_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDV8_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.810e-27 Identity = 89/235 (37.87%), Postives = 131/235 (55.74%), Query Frame = 0
Query: 121 VAIAVLFLLFLSQVGIGGGGGRTSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLA--AQVAAGAELLYDVLTDPSLEGCR-GLMLALSKSDLKEAKAP-RAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFV 351
VA AVL LL + + G KR V+L +GPCG GKTA+ +RL G + T+ TVTSM+ SA+ ++L D+PGH RLR V Q A ++VF++D ++++ AQV AE L+DV T P L +++A SKSDL A AP R + LL+ EL +L+ TR L +++ +P LGR PF+ ++D+PCEVV S+ + +L+F+
Sbjct: 16 VAGAVLLLLVAFIIKMAASGSGPGGKRD-VILLVGPCGGGKTALFHRLRDG----PSPTLETVTSMKETLESFPLFDEDSANVSVL-DFPGHERLRSQVSQFYPIAKKLVFVVDSTTVSDPAQVRKAAEFLFDVFTHPKLNDTAIPVLIACSKSDLTTAAAPGRIQSLLEAELTQLKSTRASLEAHDDDESIP----LGRDNVPFAFDVDAPCEVVFETYSIHSAEAIAPLLDFI 240
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A7S2DSR0_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSR0_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.910e-26 Identity = 73/204 (35.78%), Postives = 115/204 (56.37%), Query Frame = 0
Query: 151 VLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLAAQVAAGAELLYDVLTDPSLEGCRGLMLALSKSDLKEAK-APRAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFVRA 353
VL +GPCG+GKT + +L +GG TVTSM C+ + ++D+PGH R R + +L GA +V ++D S+ + QV ++LL+ VLT P L +++ +K D++ +K A R K+LLQKEL+ +R TRG + +GE+ S + LG+ G+PF + D P A+G ++ EGGL + F+ A
Sbjct: 7 VLLIGPCGAGKTVIFQQLCYGG------VAETVTSMSPAHSECTMGSKDAPKKINVIDFPGHMRQRPALLGQLSGAKGVVVVVDSSN-SKQVKEASDLLFSVLTAPLLPHSTSVLVFCNKMDVEGSKSADRVKVLLQKELETMRNTRGSMSQEGEDGSKGSRM-LGQEGRPFRFDHDMPNITFASGTALAGEGGLSELTTFLTA 202
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A067D7V6_SAPPC (Signal recognition particle receptor subunit beta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7V6_SAPPC) HSP 1 Score: 106 bits (264), Expect = 3.620e-23 Identity = 75/218 (34.40%), Postives = 115/218 (52.75%), Query Frame = 0
Query: 138 GGGGRTSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSL--AAQVAAGAELLYDVLTDPSLEGCR-GLMLALSKSD-LKEAKAPRAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFV 351
GGG + VVL +GPCG+GKTA+ +RL +G + V TVTSM+ P T + D+PGH R+R Q A +I+F++D ++ A+ + AE LYD+ T P + +M+A SK+D +K A + LL+ EL +L+ TR L G++D+ ++ LGR F ID+PC+V G S+ L +L+F+
Sbjct: 32 GGGAGLGGSGRDVVLLVGPCGAGKTALFHRLRNG-----PTKVETVTSMKE-TMETFPLFDEENATISICDFPGHERMRSTATQFYPIAKKIIFVVDATTANDASHIRKAAEFLYDIFTHPKINDAGVPVMIACSKTDDVKAATPATVQSLLETELTQLKSTRASLEAHGDDDE---SIPLGRDNALFEFAIDAPCDVTFEGYSIQTPDALNPLLDFI 240
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: M4B3E5_HYAAE (Signal recognition particle receptor subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3E5_HYAAE) HSP 1 Score: 97.8 bits (242), Expect = 6.880e-20 Identity = 74/213 (34.74%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 143 TSKKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLAAQVAAGAELLYDVLTDPSLEGCRG-LMLALSKSDLKEAKAPRA-KMLLQKELDKLRGTRGMLGTQGEEDDMP-SAVALGRPGQPFSLEIDSPCEVVAAGCSVVKEGGLESVLEFVR 352
T KKRK + L LGP +GKT+ + + G S++ T +P + + T +VDYPGH RLR + A I F +D S + + A AE LYDV + + +M+ +KSD++EA +P+ + L+KEL +L+ TR L T+G+E+D S V +GR G+ F ++D+PCE+ A CSV K+ + V+ F++
Sbjct: 53 TGKKRK-MALLLGPRHAGKTSFFHLVRDGEHAETVSSMKEQTGRFIVHGKYNPDKFDAELT--VVDYPGHERLRPRMADFYPVAGCIAFFVDASDVPSFRQA-AEFLYDVFANKKVNDLTPPIMVVCNKSDMREAVSPQVVRDALEKELTQLKKTRSSLETEGDEEDQDLSQVPVGRDGESFQFDVDAPCEISFAKCSV-KDAEIHDVVRFIQ 260
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Match: A0A7S3JR42_9STRA (Signal recognition particle receptor subunit beta (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR42_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.280e-19 Identity = 71/190 (37.37%), Postives = 96/190 (50.53%), Query Frame = 0
Query: 145 KKRKGVVLFLGPCGSGKTAMCYRLSHGGGQAAASTVATVTSMEACRYPCSPPRCSSADTALLVDYPGHGRLRGGVGQELRGADRIVFMLDGSSLAAQVAAGAELLYDVL-TDPSLEGCRGLMLALSKSDLKEAKAP-RAKMLLQKELDKLRGTRGMLGTQGEEDDMPSAVA-LGRPGQPFSLEIDSPCEV 331
+ R +L +GPCGSGKT + YRL H TV TV+SM+ P SP LVD PGH RLRG + EL A I+F+ D S Q AELLY +L T + L+ +KSD K K R K+++ E++ LR T + + + S A LG PGQ F+ + SPC++
Sbjct: 28 RTRSASILIVGPCGSGKTLLFYRLVHD------ETVDTVSSMQPNESPASP----DGLPLRLVDLPGHYRLRGLLPDELECAQAIIFVFDASDALKQAKPAAELLYAILSTFADSKTGPDLLFICNKSDNKVVKTTQRVKLMMMNEIETLRKTENSIQSTADGASSSSEQAKLGIPGQFFNFDAHSPCKI 207 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig8.15626.1 ID=prot_C-linearis_contig8.15626.1|Name=mRNA_C-linearis_contig8.15626.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=357bpback to top |