prot_C-linearis_contig8.15540.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15540.1
Unique Nameprot_C-linearis_contig8.15540.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length986
Homology
BLAST of mRNA_C-linearis_contig8.15540.1 vs. uniprot
Match: A0A6H5KTJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ7_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 9.430e-191
Identity = 470/876 (53.65%), Postives = 548/876 (62.56%), Query Frame = 0
Query:  137 CVY---YNVHTYQQSILTQMGALIASAHAQSNLHARAISAQEIVNHLKSAIKRMNVRLIELRG--ERKIEYNTVVMSKLIHTQNKIITDELG-KLGISVTSLKPTLDLERELKKRSDAAYLAVKNKVDKAKRSEAEKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRSAPAAAMAVETEDVKPVVAT---LAPT------------LAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPLVMXXXXXXXXXXXXXXVAPAAAVQTPQAPVYGVQALGAA--------------APPASSVGVAAQVCLVCTAYAYAPQQAAAAVTQAAPYVKPKVHTDVDPKSGLQKLPSDKLDTAKKEVEYITPADALAEEERRLRQA-NEQVAAQRKPSRPWFTTNVVDHRHAWCSLRDAGERAGMRRVLKQRPWGNPEDPLGGGKEAAGSDVLELMSSAAQHYLKELLNDLKVIAWQRKGGLSTDLLAGIASRLQDPSVQAPSPKAELRRGLVPKLPPVADLPRVLLEEEEGAHRRQCEEREARWDSELADTLATAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSREQLAASEFARRVAIKHGIGVVAALMKKKELATKEASSAANAESAEAAGDADG---DDPMGLADRRPTAGGIRGXXXXXXXXXXXXXALSAGGGLKRPLDPLADENDALETVRIIRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPXXDGAAANGLAVAQTAGGGDGAVAKANGERGAARVQISNADLAELLGSTKPKGDPRRWAKVLYRAQNSRQGVHA 973
            C+Y   + +    +SIL++MG LIA+A+A++N     ++ Q +V+HLK+A+KRMNVRLIELR     KIEYNT +MSKLI+TQNKIITDEL  KLG+++TSL P LDLE ELKKRSD AYLAVKNKVD+AKRSEA KAA         XXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXX       AA+ V+ EDVKP V T    AP             LA Q                                                 XXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXX VA     Q  Q PVYG QA GAA              AP A             TA+A A             Y KPKV+ DVDP++GLQKLP+DKLD+AKK+VE+I  +D +AEEE RLR   +  V  ++ P+  WF TNVVDHRHAWC LRDAGE+AGMRRVLK+RPWGNP +PL GGKEAAGSDVL+LMS AAQ+YLK +L++L V+A+QRKGGLS +LL+G+ SRL+DPSV+   PKAELR+ LVP+LP V +LPRV+LE+ E AHR++CEERE RWD ELADTL TAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLS+EQLA SEFARRVA+KHGIGVVAALMKKKELA+                       DDPM ++DR  T     G               + G GLKRPLDPLA + DA+ETVR IRRR                                              G G+G+   +  E   A ++I+NADLAELL STKP+GDPR+WA+VL RAQNSR+GVHA
Sbjct:    2 CLYSGEFPLDDCSKSILSEMGTLIAAANAKANPGGVNVAPQRVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLINTQNKIITDELEQKLGMNLTSLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAAIKAASANPGXXXXXXXXXXXXXXXXXXXXXXXXXXPQVVAMPXXXXXXX-----PAAVPVKMEDVKPTVVTKPMAAPAAATSHHVVQQAHLAPQQQAVVAPQPVAPAQVKLPPTSVAVAGTASAPLVIGASPDSTPVAAAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVA-----QHSQTPVYGGQAPGAAXXXXXXXXXXXXRAAPQAP------------TAHAPAXXXXXXXXXXXPAYTKPKVYNDVDPRTGLQKLPTDKLDSAKKQVEHINSSDVVAEEETRLRSTPSPLVPPEKPPASTWFLTNVVDHRHAWCCLRDAGEKAGMRRVLKERPWGNPREPLEGGKEAAGSDVLKLMSFAAQYYLKNILDELAVVAYQRKGGLSAELLSGVESRLRDPSVK--DPKAELRQSLVPRLPSVRNLPRVILEKTEEAHRKECEEREERWDVELADTLTTAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGVVAALMKKKELASXXXXXXXXXXXXXXXXXXXXXXXDDPMDVSDRAITGDSSSGGRSSKDSKGKAGNKRAPGTGLKRPLDPLASD-DAVETVRNIRRRLVLGAPDHGDDDDDI-------------------------------GSGEGSTPPS--EEQEASLEINNADLAELLRSTKPRGDPRKWARVLLRAQNSRKGVHA 819          
BLAST of mRNA_C-linearis_contig8.15540.1 vs. uniprot
Match: D8LCB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB6_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 1.420e-179
Identity = 383/847 (45.22%), Postives = 448/847 (52.89%), Query Frame = 0
Query:  153 MGALIASAHAQSNLHARAISAQEIVNHLKSAIKRMNVRLIELRG--ERKIEYNTVVMSKLIHTQNKIITDELG-KLGISVTSLKPTLDLERELKKRSDAAYLAVKNKVDKAKRSEAEKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRSAPAAAMAVETEDVKPVVATLAPTLAQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPLVMXXXXXXXXXXXXXXVAPAAAVQTPQAPVYGVQALGAAAPPASSVGVAAQVCLVCTAYAYAPQQAAAAVTQAAP----------------YVKPKVHTDVDPKSGLQKLPSDKLDTAKKEVEYITPADALAEEERRLRQA-NEQVAAQRKPSRPWFTTNVVDHRHAWCSLRDAGERAGMRRVLKQRPWGNPEDPLGGGKEAAGSDVLELMSSAAQHYLKELLNDLKVIAWQRKGGLSTDLLAGIASRLQDPSVQAPSPKAELRRGLVPKLPPVADLPRVLLEEEEGAHRRQCEEREARWDSELADTLATAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSREQLAASEFARRVAIKHGIGVVAALMKKKELATKEASSAANAESAEAAGDAD------GDDPMGLADRRPTAGGIRGXXXXXXXXXXXXXALSAGGGLKRPLDPLADENDALETVRIIRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPXXDGAAANGLAVAQTAGGGDGAVAKANGERGAARVQISNADLAELLGSTKPKGDPRRWAKVLYRAQNSRQGVHA 973
            MG LIA+A+A++N     ++ Q++V+HLK+A+KRMNVRLIELR     KIEYNT +MSKLI TQNKIITDEL  KLG+++ SL P LDLE ELKKRSD AYLAVKNKVD+AKRSEA KAA                                                                   + AT                                                                                                                PVYG QA GAA P     G AAQ         +  QQ AA     AP                Y KPKV+ DVDP++GLQKLP+DKLD+AKK+VE+I  +D +AEEE RLR   +  V  ++ P+  WF TNVVDHRHAWC LRDAGERAGMRRVLK+RPWGNP +PL GGKEAAGSDVL+LMS AAQ+YLK +L++L V+A+QRKGGLS +LL+G+ SRL+DPSV+   PKAELR+ LVP+LP V DLPRV LE  E AHR++CEERE RWD ELADTL TAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLS+EQLA SEFARRVA+KHGIGVVAALM                                 DDPM ++DR  T      XXX            + G GLKRPLDPLA + DA+ETVR IRRR                                 GA  +G           G  A    E   A ++I+NADLAELL STKP+GDPR+WA+VL+RAQNSR+GVHA
Sbjct:    1 MGTLIAAANAKANPGGVNVAPQKVVDHLKAAVKRMNVRLIELRSGNSTKIEYNTTIMSKLITTQNKIITDELEQKLGMNLASLAPHLDLEGELKKRSDTAYLAVKNKVDRAKRSEAHKAA-------------------------------------------------------------------MKAT----------------------------------------------------------------------------------------------------------------PVYGGQAPGAAPP--HGAGAAAQ---------FTQQQRAAPQAPTAPXXXXXXXXXXXXXXXAYTKPKVYNDVDPRTGLQKLPTDKLDSAKKQVEHINSSDVVAEEETRLRSTPSPLVPPEKPPASTWFLTNVVDHRHAWCCLRDAGERAGMRRVLKERPWGNPREPLEGGKEAAGSDVLKLMSLAAQYYLKNMLDELAVVAYQRKGGLSAELLSGVESRLRDPSVK--DPKAELRQSLVPRLPRVQDLPRVTLERTEEAHRKECEEREERWDVELADTLTTAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGVVAALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDPMDVSDRPTTGDSSSXXXXSKDSNGKAGNKRTPGAGLKRPLDPLASD-DAVETVRNIRRRLVL------------------------------GAPDDGDXXXXXXXXXRGVGATPPSEEQEAGLEINNADLAELLRSTKPRGDPRKWARVLFRAQNSRKGVHA 624          
BLAST of mRNA_C-linearis_contig8.15540.1 vs. uniprot
Match: D7FYX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX3_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 3.640e-45
Identity = 119/323 (36.84%), Postives = 162/323 (50.15%), Query Frame = 0
Query:  512 KSGLQKLPSDKLDTAKKEVEYITPADALAEEERRLR--------------------------------------QANEQVAAQRKPSRPWFTTNVVDHRHAWCSLRDAGERAGMRRVLKQRPWGNPEDPLGGGKEAAGSDVLELMSSAAQHYLKELLNDLKVIAWQRKGGLSTDLLAGIASRLQDPSVQAPSPKAELRRGLVPKLP---------------------PVADLPRVLLEEEEGAHRRQCEEREARWDSELADTLATAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSREQLAASEFARRVAIKHGIGV 775
            ++GL KLP D LD   ++V+ +T A     EERRLR                                      + + + AA+R+  +PWF  NVVDHR AWC LR+AG RAG+R+VL+ RPWG+P  P GGG+EAA S VLEL+S+A Q YLK +L +L V+A+QR+GGLS +LL G+  R++DP  ++P     L  GLVP+ P                        + PR +L  EEGAHRR C EREA W++ +A+ +A A+ V                                     AA+EFARRV  K G+G+
Sbjct:  280 RNGLLKLPWDGLDAVSEQVKLVTDARVQLIEERRLRPSYVPPLSPRDYQYSSGTGGDSTEEPGSPQGHDDSEEAEEDAEAAARRREKQPWFARNVVDHRSAWCGLRNAGARAGLRKVLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAYLKRVLTELSVVAYQRRGGLSEELLQGLEERMEDP--RSPGSALVLYEGLVPRFPRYESGGSXXXXXXXXXXXXXXXXXEDPREVLRREEGAHRRSCLEREAGWEARVAEVMAAADGV-------------------------------------AANEFARRVGFKRGVGL 563          
BLAST of mRNA_C-linearis_contig8.15540.1 vs. uniprot
Match: A0A6H5K4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T0_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.660e-43
Identity = 119/323 (36.84%), Postives = 161/323 (49.85%), Query Frame = 0
Query:  512 KSGLQKLPSDKLDTAKKEVEYITPADALAEEERRLR--------------------------------------QANEQVAAQRKPSRPWFTTNVVDHRHAWCSLRDAGERAGMRRVLKQRPWGNPEDPLGGGKEAAGSDVLELMSSAAQHYLKELLNDLKVIAWQRKGGLSTDLLAGIASRLQDPSVQAPSPKAELRRGLVPKL---------------------PPVADLPRVLLEEEEGAHRRQCEEREARWDSELADTLATAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSREQLAASEFARRVAIKHGIGV 775
            + GL KLP D LD   ++ + +T A     EERR R                                      Q + + AA+ +  +PWF  NVVDHR AWC LRDAG RAGMR+VL+ RPWG+   P GGG+EAA S VLE        YLK +L +L V+A+QR+GGLS +LL G+  R++DP  ++P     L  GLVP+                                    E AHRR C +REA W++ +A+ +A A   RK   +R +    P      E +   ++SGWLSREQ+AA+EFARRV +K G+G+
Sbjct:  245 RKGLLKLPWDGLDVVSEQAKLVTDARVQLIEERRFRPSFVPPLSPRDYQYSSGTGGDSTEEPGSPQGHDDSEEAQEDAEAAARWREKQPWFARNVVDHRSAWCGLRDAGARAGMRKVLQPRPWGDALAPSGGGQEAANSQVLEA-------YLKRVLTELSVVAYQRRGGLSEELLQGLEERMEDP--RSPGSALILYEGLVPRFRRYQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAHRRSCLKREAGWEARVAEVMAAAHGGRKSRNKRRSLTNAPSRRVGVESLSAWSESGWLSREQVAANEFARRVGVKRGVGL 558          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KTJ7_9PHAE9.430e-19153.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCB6_ECTSI1.420e-17945.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYX3_ECTSI3.640e-4536.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4T0_9PHAE1.660e-4336.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 354..390
NoneNo IPR availableCOILSCoilCoilcoord: 536..556
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 263..897

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1181246..1188440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15540.1mRNA_C-linearis_contig8.15540.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1181097..1189251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15540.1 ID=prot_C-linearis_contig8.15540.1|Name=mRNA_C-linearis_contig8.15540.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=986bp
MSQGGDGLPSELTNILLREDSRAGVGQPTSVAAAAAAAATVAAAYAAPLA
AASPVAYPGAAAAVPATTGAMVTPSPVPVAPVPPQQPMTPHHQQHHQQAQ
AQAQAQQAAQQQAATPGSIRRMAKKNETSAQTAIWNCVYYNVHTYQQSIL
TQMGALIASAHAQSNLHARAISAQEIVNHLKSAIKRMNVRLIELRGERKI
EYNTVVMSKLIHTQNKIITDELGKLGISVTSLKPTLDLERELKKRSDAAY
LAVKNKVDKAKRSEAEKAAAKAASMGAAAAAAAGGGVGAGGVVVGGGSSN
SNSPAVAAAAAAAAAASRLRSAPAAAMAVETEDVKPVVATLAPTLAQQVT
ETVCQQAQLQQQQQQQQLQQQQQQQQLQQQQQQLQQQQQQQQQPPQQAPV
PPGAPTSLPPADPAAAPGTASAPLVMAASPVAAPAAPPAAVAPAAAVQTP
QAPVYGVQALGAAAPPASSVGVAAQVCLVCTAYAYAPQQAAAAVTQAAPY
VKPKVHTDVDPKSGLQKLPSDKLDTAKKEVEYITPADALAEEERRLRQAN
EQVAAQRKPSRPWFTTNVVDHRHAWCSLRDAGERAGMRRVLKQRPWGNPE
DPLGGGKEAAGSDVLELMSSAAQHYLKELLNDLKVIAWQRKGGLSTDLLA
GIASRLQDPSVQAPSPKAELRRGLVPKLPPVADLPRVLLEEEEGAHRRQC
EEREARWDSELADTLATAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKS
GWLSREQLAASEFARRVAIKHGIGVVAALMKKKELATKEASSAANAESAE
AAGDADGDDPMGLADRRPTAGGIRGGGGGGGGAAGSGSALSAGGGLKRPL
DPLADENDALETVRIIRRRLVLSGGGGDDDGTGGAGARGGSGGGGAAEPG
GDGAAANGLAVAQTAGGGDGAVAKANGERGAARVQISNADLAELLGSTKP
KGDPRRWAKVLYRAQNSRQGVHAGGERRKTVGLRG*
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