prot_C-linearis_contig8.15531.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15531.1
Unique Nameprot_C-linearis_contig8.15531.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length540
Homology
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 5.600e-205
Identity = 348/554 (62.82%), Postives = 388/554 (70.04%), Query Frame = 0
Query:    1 MEQHHQNDPRAAEEGWSYAKFVMENPVAARTLESVLQYSGFFAPARFADRDLSIESGYALSSLAALAHDRILLQGHGSLGQGRDDRDRGTACFGNADGGQ------------SLDAPKRRERPSSIAIFAERMRVALAMIAHVQVVVEKLAGQHGGPQRRRQAITYLETLKAISRLLLLACTREMVMGGGAYVSGGKRRSPPRQDRNKSGGGRPWREVDLRGVRLDPPQSSEFAATTVNCSPPPSRRPPEVYTGKRSGVRLVVPPRASVIWSGRGRSNRPIGVGRAAMTSSFPS-SSSLCDGDGDGSGXIXXXXXXXXXXXXXXXXXXXXXSNSRVSFQGYG-GGQEMGAAGDSSEAANGGPPRLAREWRHQRRAHEEEGGGWGRGDALSPQGGGYGASQAWLVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGG-GAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
            MEQ  Q DPRA+EEGW YA FV  NP AART+E++L+YSGFFAPARFADRDLSIESGYALSSLAALAHD+IL+ G G  G GR  +D G A     DGGQ             LD PK RERPSS  + A+RMRVALAMIA+VQ+VVEKLA QHGGP+RR+QAI YLETLKA++RLLLLACTREMV+GGG+YVSGG RR+PP  +RNK+G    WREVDL G RL+  QSSEFA   V+  P P   PPEVYTGKRSGV+L+VPPRASV+WSGRGRSNR  GV R A T+S PS  SS    DG                           S+S  SF+G   GGQ +G  G    A++      +  WR +R A                QGG     QAWL+AGEVIHILRPL YSY C + GE+SWRPWL SL MDAAAFACTARAGG  GA++LL PI  AG          GVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFEL AEPVSRGAAGVFEGVP+LGGMAGYALNMLLYVQRHHFYTSAS
Sbjct:    1 MEQQ-QRDPRASEEGWCYANFVRHNPTAARTVETLLRYSGFFAPARFADRDLSIESGYALSSLAALAHDQILIHGQGG-GLGRGGQDGGAANDDGLDGGQVHALGIAPGSSIRLD-PKNRERPSSTTVVAQRMRVALAMIANVQIVVEKLAAQHGGPRRRQQAIVYLETLKALARLLLLACTREMVVGGGSYVSGGNRRTPPLGNRNKAGA---WREVDLNGARLNQAQSSEFA---VDRPPSPPCPPPEVYTGKRSGVKLIVPPRASVVWSGRGRSNRSGGVSRLAATASSPSCGSSRRSADG----------------------VFQNDSSSSSSFRGCANGGQGIGTGGSMEAASD-----ESCVWRQRREA----------------QGG-----QAWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALLTPIGEAG--------SSGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.360e-64
Identity = 185/516 (35.85%), Postives = 246/516 (47.67%), Query Frame = 0
Query:   18 YAKFVMENPVAARTLESVLQYSGFFAPARFADRDLSIESGYALSSLAALAHDRILLQGHGSLGQGRDDRDRGTACFGNADGGQSLDAPKRRERPSSIAIFAE----RMRVALAMIAHVQVVVEKLAGQHGGPQRRRQAITYLETLKAISRLLLLACTREMVMGGGAYVSGGKRRSPPRQDRNKSG--GGRPWREVDLRGVRLDPPQSSEFAATTVNCSPPPSRRPPEVYTGKRSGVRLVVPPRASVIWSGRGRSNRPIGVGRAAMTSSFPSSSSLCDGDGDGSGXIXXXXXXXXXXXXXXXXXXXXXSNSRVSFQGYGGGQEMGAAGDSSEAANGGPPRLAREWRHQRRAHEEEGGGWGRGDALSPQGGGYGASQAWLVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLL 527
            Y+ FV  NP  A  LESVL+YSGF APA+F +R+L +E+GYA SSLA L HD I                               +AP+++ +  S     E     +R AL ++AH++VV EK+A   GG  RRRQ IT +E  KA+ RL +LA TREM++ GG +  G    +PP + +  +G  G R    V   G+ L+     + A       PPP+   P +Y GKR G +  +P RA        R     G+ R     S P+ +  C    +GS                        S   +     GGG   GA   + E  +G   R  R W H            GR  A  P        +AWL+ GE +H +RP  YS +CG  GE +W PWL S+++D A+ ACTARA         V +R         G G+G  + P    EQ AELRRRK+ W LYL+R+PAFEL   P + GAAG F GVP+LGG+A YAL MLL
Sbjct:   10 YSAFVKANPGTANLLESVLRYSGFLAPAQFGERELLVEAGYAASSLAGLLHDGI-------------------------------NAPQQQHQQRSTGGHEEGVVATLRTALVVLAHIEVVAEKVAAASGGAVRRRQLITAIEVAKAVMRLTILALTREMLLAGGHHAPG----APPLRGQTIAGRVGSRVLSTV---GLGLE-----DRAENGTGHGPPPA---PVMYQGKRCGRKYALPARAQA------RHGSAPGL-RLGANGSAPALNG-CSSAQNGS----------------HTDMYGAASCCGLQHAACGGGHGDGAGWMAEEDEDGELERHRR-WLHA-----------GRAPAPPPP-------KAWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARA---------VEVR--------GGRGNGGALTP----EQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A1V9ZIW7_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIW7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.870e-17
Identity = 55/158 (34.81%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  383 GASQAWLVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 539
            G   +  + GE++HILRP++Y+  C    EQSW P+L S + +     C++R                             P           E RRRKM  FLYL+R+P F     P++ G A   + VPLLG +  +A+ N LLY QR HFYTSAS
Sbjct:  219 GHEDSLQLTGELLHILRPVIYAVLCQRKTEQSWLPFLASFSTEVLGILCSSRE----------------------------PSAKKASPAATEEWRRRKMCLFLYLLRNPFFSNVTHPLAEGVANATQPVPLLGRLVQFAIENGLLYYQRRHFYTSAS 348          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A067BFH5_SAPPC (Peroxisomal membrane protein PEX16 n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BFH5_SAPPC)

HSP 1 Score: 92.0 bits (227), Expect = 9.440e-17
Identity = 56/151 (37.09%), Postives = 76/151 (50.33%), Query Frame = 0
Query:  390 VAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 539
            + GE++HILRP+VY+  C    EQSW P+L S + +     C+         S   P +A                 P + EE     RRRKM  FLYL+R+P F     P++   A   + VP+LG +  +A+ N LLY QR HFYTSAS
Sbjct:  204 LTGEILHILRPVVYAVLCQRKSEQSWVPFLASFSTEVLGLLCS---------SAEAPTKAT----------------PAVTEE----FRRRKMCLFLYLLRNPLFSSVTNPLADSVANATQPVPVLGRLIQFAIDNGLLYYQRRHFYTSAS 325          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A1W0AC00_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC00_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.800e-16
Identity = 59/151 (39.07%), Postives = 79/151 (52.32%), Query Frame = 0
Query:  390 VAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 539
            +AGEV+HILRP++Y+  C    EQSW P+L S + +    AC++ AG   +  L V                        D   A ELRRRKM   LYL+R+P F    +P++   A   + VPLLG +  +A+ N L Y QR HFYTSAS
Sbjct:  192 LAGEVLHILRPVIYAILCQRKTEQSWIPFLASFSTEILGIACSS-AGLEHSNKLSV------------------------DPLVAEELRRRKMCLLLYLLRNPFFSSATQPLADNVANATKPVPLLGRLLQFAIDNGLHYYQRRHFYTSAS 317          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A7R9U860_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U860_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.430e-14
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
Query:  472 EQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
            EQ  ELRRRKM W LYL+RSP F+L  EPV++    V    PL+G ++ YA+ +L+++Q HHFYTS S
Sbjct:  280 EQKEELRRRKMQWLLYLLRSPLFQLICEPVAKTTDKVLGRAPLIGSLSNYAMQLLMHIQSHHFYTSGS 347          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: K3YTE2_SETIT (Peroxisomal membrane protein PEX16 n=27 Tax=Panicoideae TaxID=147369 RepID=K3YTE2_SETIT)

HSP 1 Score: 82.0 bits (201), Expect = 3.560e-13
Identity = 54/157 (34.39%), Postives = 73/157 (46.50%), Query Frame = 0
Query:  383 GASQAWLVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
            G +    V GEV+HI RPLVY       G +SW PWL SLA++  +          G  S    +   GG V              L   +  EL+RRKM+W LY+MR P F  + +   + A  V   VPL+G + G  + +L  VQ  + YTS S
Sbjct:  239 GGTGRLFVLGEVVHIFRPLVYVLLIRKFGIRSWTPWLVSLAVELTSL---------GIHSHATDLNHRGGKVH------------QLSSAERDELKRRKMMWALYVMRDPFFTSYTKRHLQKAEQVLNPVPLIGFLTGKLMELLEGVQTRYTYTSGS 374          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A0A2T7F150_9POAL (Peroxisomal membrane protein PEX16 n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7F150_9POAL)

HSP 1 Score: 81.3 bits (199), Expect = 6.390e-13
Identity = 54/157 (34.39%), Postives = 73/157 (46.50%), Query Frame = 0
Query:  383 GASQAWLVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
            G +    V GEV+HI RPLVY       G +SW PWL SLA++  +          G  S    +   GG V              L   +  EL+RRKM+W LY+MR P F  + +   + A  V   VPL+G + G  + +L  VQ  + YTS S
Sbjct:  239 GGTGRLFVLGEVVHIFRPLVYVLLIRKFGIRSWTPWLVSLAVELTSL---------GIHSHATDLNHRGGKVH------------QLSSAERDELKRRKMMWALYVMRDPFFASYTKCHLQKAEQVLNPVPLIGFLTGKLVELLEGVQTRYTYTSGS 374          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: U5DG66_AMBTC (Peroxisomal membrane protein PEX16 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DG66_AMBTC)

HSP 1 Score: 76.6 bits (187), Expect = 6.930e-13
Identity = 46/151 (30.46%), Postives = 68/151 (45.03%), Query Frame = 0
Query:  389 LVAGEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
             + GEV+ I RPLVY       G +SW+PW+ SLA+D AA    +    GG   +L                           E+  EL+RRK+LW LYL+R P F  ++             +PL+G +    + +++  Q  + YTSAS
Sbjct:   27 FLLGEVLFITRPLVYVLFIRKHGVRSWKPWMLSLAVDFAAMGILSFVTNGGKHHIL-------------------------SSEETNELKRRKLLWALYLLRDPFFSKYSRCRIENTEKYLNPIPLVGFLTAKFVELIIGAQTRYTYTSAS 152          
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Match: A9NWV1_PICSI (Peroxisomal membrane protein PEX16 n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NWV1_PICSI)

HSP 1 Score: 75.9 bits (185), Expect = 7.220e-13
Identity = 49/148 (33.11%), Postives = 72/148 (48.65%), Query Frame = 0
Query:  392 GEVIHILRPLVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAAGGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 539
            GEV+ ILRPLVY+      G  +W+PWL SLA+D A                 +  R A  G+ GSG G        L   +  E++RR++LW  Y+MR P F  +          + + VP++G +   A+ +L+ VQ  + Y SAS
Sbjct:    2 GEVLLILRPLVYALFIRRYGLGAWKPWLVSLAVDLA--------------GTTIISRLASPGLTGSGRGYS------LSNAEKEEIKRRRLLWAFYVMRDPFFSKYTRHRLEYFEQLLKPVPVIGTLIAKAVELLVGVQTRYSYISAS 129          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC96_ECTSI5.600e-20562.82Peroxisomal membrane protein PEX16 n=2 Tax=Ectocar... [more]
A0A835Z8Q5_9STRA2.360e-6435.85Peroxisomal membrane protein-domain-containing pro... [more]
A0A1V9ZIW7_9STRA3.870e-1734.81Peroxisomal membrane protein PEX16 n=1 Tax=Achlya ... [more]
A0A067BFH5_SAPPC9.440e-1737.09Peroxisomal membrane protein PEX16 n=3 Tax=Saprole... [more]
A0A1W0AC00_9STRA2.800e-1639.07Peroxisomal membrane protein PEX16 n=1 Tax=Thraust... [more]
A0A7R9U860_9STRA6.430e-1452.94Peroxisomal membrane protein PEX16 n=1 Tax=Pinguio... [more]
K3YTE2_SETIT3.560e-1334.39Peroxisomal membrane protein PEX16 n=27 Tax=Panico... [more]
A0A2T7F150_9POAL6.390e-1334.39Peroxisomal membrane protein PEX16 n=7 Tax=Panicum... [more]
U5DG66_AMBTC6.930e-1330.46Peroxisomal membrane protein PEX16 n=1 Tax=Amborel... [more]
A9NWV1_PICSI7.220e-1333.11Peroxisomal membrane protein PEX16 n=1 Tax=Picea s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013919Peroxisome membrane protein, Pex16PFAMPF08610Pex16coord: 390..528
e-value: 4.0E-21
score: 75.5
coord: 17..248
e-value: 2.6E-24
score: 86.0
IPR013919Peroxisome membrane protein, Pex16PANTHERPTHR13299UNCHARACTERIZEDcoord: 17..538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1100377..1103389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15531.1mRNA_C-linearis_contig8.15531.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1099997..1103458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15531.1 ID=prot_C-linearis_contig8.15531.1|Name=mRNA_C-linearis_contig8.15531.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=540bp
MEQHHQNDPRAAEEGWSYAKFVMENPVAARTLESVLQYSGFFAPARFADR
DLSIESGYALSSLAALAHDRILLQGHGSLGQGRDDRDRGTACFGNADGGQ
SLDAPKRRERPSSIAIFAERMRVALAMIAHVQVVVEKLAGQHGGPQRRRQ
AITYLETLKAISRLLLLACTREMVMGGGAYVSGGKRRSPPRQDRNKSGGG
RPWREVDLRGVRLDPPQSSEFAATTVNCSPPPSRRPPEVYTGKRSGVRLV
VPPRASVIWSGRGRSNRPIGVGRAAMTSSFPSSSSLCDGDGDGSGSICSQ
RSPGDGGFCSTCSARDSGSNSRVSFQGYGGGQEMGAAGDSSEAANGGPPR
LAREWRHQRRAHEEEGGGWGRGDALSPQGGGYGASQAWLVAGEVIHILRP
LVYSYSCGSAGEQSWRPWLTSLAMDAAAFACTARAGGGGAVSLLVPIRAA
GGGVDGSGAGDGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEP
VSRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013919Pex16