prot_C-linearis_contig79.15379.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15379.1
Unique Nameprot_C-linearis_contig79.15379.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length179
Homology
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 9.010e-84
Identity = 131/168 (77.98%), Postives = 149/168 (88.69%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HSTAN+ QG RLQRMLG DA   D LPWERAGPGRCY+VK+DGITGAASFVLQPKR+P+IDLESDGFT   P ++RRGA KR+RYD+RFKAHV+QQLRILEE R ALW+AEHL+P+QYLETHMK+P +NISKW KDEDEIV  AAD+VK+TL AKQQPKRWFPAAE+E
Sbjct:  191 HSTANVFQGQRLQRMLGDDAKG-DVLPWERAGPGRCYHVKIDGITGAASFVLQPKRVPNIDLESDGFTPAEPRSARRGAAKRNRYDFRFKAHVIQQLRILEEDRQALWQAEHLSPMQYLETHMKVPRTNISKWVKDEDEIVAFAADEVKQTLLAKQQPKRWFPAAERE 357          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.390e-64
Identity = 114/168 (67.86%), Postives = 125/168 (74.40%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HSTANM QG RLQRMLG DA   D L WERAGPGRCY+VK DGITGAASFVLQPKRLPDIDLES+GFT   P ++RRGA KR+RY Y                  +LW AEHLTPLQYLETHM +P  NI KW K+E+EIV  AAD+VK+TL AKQQPKRWFP AEKE
Sbjct:   58 HSTANMFQGQRLQRMLGDDAKG-DVLLWERAGPGRCYHVKFDGITGAASFVLQPKRLPDIDLESEGFTRAEPKSARRGAAKRNRYGY-----------------TSLWLAEHLTPLQYLETHMNVPLPNICKWVKEENEIVAGAADEVKQTLLAKQQPKRWFPIAEKE 207          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5JKI6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.050e-60
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAE 167
            HS+ANM  GVRL+RML KD +    LPWE AGPGRC++VK D  TG ASFVLQ KR  D+DL+SDGF   +P  +R GA KR RYD+R KAH + QLRIL++    LW+ E  TPLQ+LE  +KIP+SNI KWAK+E E+V AAADDVKK+L AKQQPKRWFP AE
Sbjct:  210 HSSANMSNGVRLRRMLRKD-VGGSVLPWEAAGPGRCWHVKFDHATGTASFVLQRKRFLDLDLDSDGFMDRKPKDTR-GAPKRRRYDFRVKAHAVNQLRILQDNAEDLWKDEQRTPLQFLEDRLKIPYSNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFPEAE 373          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5KCI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI3_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.250e-60
Identity = 105/167 (62.87%), Postives = 124/167 (74.25%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEK 168
            HS+ANM  GVRL+RML KD      LPWE AGPGRC++VK D  TG ASFVL+ KR  D+DL+SDGF   +P  +R GA KR RYD+RFKAH + QLRILE+    LW+ E  TPL + E  +KIP+SNI KWAK+E E+V AAADDVKK+L AKQQPKRWFP AEK
Sbjct:  158 HSSANMSNGVRLRRMLRKDEQGS-VLPWEAAGPGRCWHVKFDHATGTASFVLRRKRFLDLDLDSDGFMDRKPKDTR-GAPKRRRYDFRFKAHAVNQLRILEDNAEDLWKEEQRTPLLFFEDRLKIPYSNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFPEAEK 322          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5K3E7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E7_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.910e-59
Identity = 106/168 (63.10%), Postives = 124/168 (73.81%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HS ANM  G+RLQRMLGK        PW  AGPGRC++VKVDG TGAASFVLQ KR  D+DLESDGFT +R     RGA KR RYD+RFKAHV+ QLR+L+E    L++ E LTPLQYLE  +K+ +S I KWA+DE  IV +AADDVK+T  AKQQPKRWFP  EK+
Sbjct:   62 HSNANMSNGLRLQRMLGKTPKGY-VQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT-DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKQTHLAKQQPKRWFPEEEKK 227          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5LCI6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCI6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.550e-59
Identity = 109/169 (64.50%), Postives = 128/169 (75.74%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDAL-PWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HS ANM   +RLQRMLGK  + K  + PWE AGPGRC++VKVDG TGAASFVLQ KR  D+DLESDGFT +R     RGA KR RYD+RFKAHV+ QLR+L+E    L++ E LTPLQYLE  +K+ +S I KWA+DE  IV +AADDVKKTL AKQQPKRWFP  EK+
Sbjct:  192 HSNANMSNRLRLQRMLGK--IPKGYVQPWEEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT-DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKK 357          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5KBV2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBV2_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 4.680e-59
Identity = 109/167 (65.27%), Postives = 126/167 (75.45%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEK 168
            HS+ANM  GVRL+RML K+ ++   LPWE AGPGRC++VKVD  TGAASFVLQ KR  D+DLESDGF  +R     RGA KR RYDYRFKA+ + QLRILE+    LW+ E  TPLQYLE  +K+ +SNI KWAKDE  IV AAADDVKK+L AKQQ KRWFP AEK
Sbjct:  424 HSSANMSNGVRLRRMLWKN-LEGRVLPWEGAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM-DRETKETRGAPKRRRYDYRFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQSKRWFPEAEK 588          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5L1Y1_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y1_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.580e-59
Identity = 109/167 (65.27%), Postives = 126/167 (75.45%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEK 168
            HS+ANM  GVRL+RML K+ ++   LPWE  GPGRC++VKVD  TGAASFVLQ KR  D+DLESDGF  +R     RGA KR RYDYRFKA+ + QLRILE+    LW+ E  TPLQYLE  +K+ +SNI KWAKDE  IV AAADDVKK+L AKQQPKRWFP AEK
Sbjct:  318 HSSANMSNGVRLRRMLRKN-LEGRVLPWEEPGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM-DRETKETRGAPKRRRYDYRFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEK 482          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5JRI3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI3_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.320e-58
Identity = 106/168 (63.10%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HS A M  G+RLQRMLGK        PW  AGPGRC++VKVDG TGAASFVLQ KR  D+DLESDGFT +R     RGA KR RYD RFKA V+ QLR+L+E    L++ E LTPLQYLE  +K+ +S I KWA+DE  IV +AADDVKKTL AKQQPKRWFP  EK+
Sbjct:   17 HSNATMSNGLRLQRMLGKTPKGY-VQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT-DRKVKETRGAVKRKRYDVRFKALVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKK 182          
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.340e-58
Identity = 109/168 (64.88%), Postives = 125/168 (74.40%), Query Frame = 0
Query:    2 HSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAASFVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRILEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVKKTLQAKQQPKRWFPAAEKE 169
            HS ANM  G+RLQRMLGK        PW  AGPGRC++VKVDG TGAASFVLQ KR  D+DLESDGFT ER     RGA KR RYD+RFKAHV+ QLR+L+E    L++ E LTPLQYLE  +K+ +S I KWA+DE  IV +AADDVKKTL AKQQPKRWFP  EK+
Sbjct:   85 HSNANMSNGLRLQRMLGKTPKGY-VQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT-ERKVKEARGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKK 250          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRF1_ECTSI9.010e-8477.98C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JXN2_9PHAE1.390e-6467.86C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JKI6_9PHAE2.050e-6063.25C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KCI3_9PHAE2.250e-6062.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3E7_9PHAE1.910e-5963.10C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LCI6_9PHAE2.550e-5964.50C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBV2_9PHAE4.680e-5965.27C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L1Y1_9PHAE8.580e-5965.27HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5JRI3_9PHAE1.320e-5863.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDV1_9PHAE1.340e-5864.88C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:35509..36045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15379.1mRNA_C-linearis_contig79.15379.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 26833..36381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15379.1 ID=prot_C-linearis_contig79.15379.1|Name=mRNA_C-linearis_contig79.15379.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=179bp
MHSTANMLQGVRLQRMLGKDAMDKDALPWERAGPGRCYYVKVDGITGAAS
FVLQPKRLPDIDLESDGFTAERPATSRRGADKRSRYDYRFKAHVLQQLRI
LEEYRPALWEAEHLTPLQYLETHMKIPHSNISKWAKDEDEIVVAAADDVK
KTLQAKQQPKRWFPAAEKEHGHKNRCSG*
back to top