prot_C-linearis_contig76.15230.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI) HSP 1 Score: 773 bits (1995), Expect = 7.690e-270 Identity = 453/707 (64.07%), Postives = 509/707 (71.99%), Query Frame = 0
Query: 133 ETKGPFLALVSGVQNVLDACPAMPGVALESSIQDCLRRPSPGAAAWSLGAARTFVGGVLSLVSTWRSPRSLSLCQAVVSVLVRFVAEKGCVLADDSPVLDVEEKEAH---RCSLCVSCAAG---NDIVVDAQTAPVSQPLCCNAQEKRDLVLEGMLRWAVDIHFRQCSRVLQASLSRAVCDGIRQALDAAELSSARLSPPCFALGCRLLLSFVGGLAGDGGAQAASFLQERCGTELRLFLARARFRPLS---RGRTCTGSRAATGVP-ARRLPELPVLDAYVGHLCLCRHVSDALASRHLDWLARQALVVLRLLDGDXXXXXXXXEPAGATKSAETFGALVSLSHALALLLTRPKRGPGVGPVGGVTEVSGNLLEIVFDSDPRPLSGVPPLLAEAAIDALKAAGHLQLAQPDEFLRPPLAPTRPEGSRRRVPNVVGREL-----PGAANASSDGASFADGIEFRRASVAFRNSWSLAKAGLDPHLPVLE--SRKRRLDSDGDSGXXXXXXXX-----DGDLDGG-SVVGSGWGRVPDEVALRVFSFLTPKRVCRLACVDRAWKELLMVPRVWRPFFEARWPVTVIESEEDVAGVTDRLLLEGLGSEERAKRKNKRRRTRDGVVRWRLADDT-GPAQP--SREWMVLYRDRHRAERAARGRVAAKTKFGWLVCPFLGCVCSLKSEFAVKRHVQIHKRPVGKRRVVKPK 813
+T GPFLALVSG+Q LDACPAMP + LE+SI+DCLRRPSPGAA W+ G+ R FV GVLSLVS+ SPRSL CQAVVSVLVRFVA GC DDS LD E +E R S C+SC+ N DA ++P CCNAQEKRDLVLE MLRWAVD+HFRQCSR+LQAS++RAVC G+RQAL AAELS + SPP F LGCRLLLSFVGGLAGDGGAQ A FL+ERCG E+R FL R R+RP S RGR + ATG ARR PELP+LDAYVGHLCLCRHVSD L++ HL WLARQAL VLR+LD +++ L SLSHALALLLTRPKRG + V E GNLLEIVFDSDPRPLS VP LAEAAID LK AGHLQLA+ DE LR P GSRR PN GR P AA + +GASFA GI+F+RAS+AFRNSWSLA AG+D LP R RR D GDS XXXXXXXX DGD+DG ++ G+GWGRVPDEV LRVFSF+TPKRVCRLACVDRAW+ELL V VWRPFFEARWP+T I S+ D+ GV+DRLL EGLGS R K +RR + GVV WR ++DT G QP R+WM LYRDRHRAERAARGR AAKT+F WLVCPFLGCV SLKSEFAVKRHV+ HKRP KR + K K
Sbjct: 10 QTNGPFLALVSGLQGALDACPAMPTLTLETSIEDCLRRPSPGAAVWAFGSTRMFVSGVLSLVSS--SPRSL--CQAVVSVLVRFVAGDGCDTLDDSLALDAEGEETQDRRRRSRCLSCSTALSDNAAGTDASETERARPQCCNAQEKRDLVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSRRQASPPSFPLGCRLLLSFVGGLAGDGGAQIAGFLRERCGAEMRRFLTRGRWRPPSGTARGRRHADAWTATGRGVARRQPELPMLDAYVGHLCLCRHVSDPLSATHLVWLARQALAVLRMLDMPEEGAPGTTAAPERRQNSNFEAVLASLSHALALLLTRPKRGGVCSSI--VPETVGNLLEIVFDSDPRPLSCVPRPLAEAAIDVLKEAGHLQLARSDELLR------LPWGSRRGEPNAAGRREESKLGPVAATVTEEGASFASGIDFQRASLAFRNSWSLAAAGVDMQLPSTNHSGRSRRGDGGGDSXXXXXXXXXXXXSADGDVDGARAIAGNGWGRVPDEVTLRVFSFMTPKRVCRLACVDRAWRELLTVSGVWRPFFEARWPLTAIGSDLDLVGVSDRLLAEGLGSA-RKNAKRRRRHGKIGVVHWRTSEDTSGQQQPLLERDWMALYRDRHRAERAARGRFAAKTEFPWLVCPFLGCVSSLKSEFAVKRHVRTHKRPREKRLMGKKK 703
BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Match: A0A6H5JX00_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX00_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 3.750e-184 Identity = 330/539 (61.22%), Postives = 376/539 (69.76%), Query Frame = 0
Query: 226 DDSPVLDVEEKEAH---RCSLCVSCAAG---NDIVVDAQTAPVSQPLCCNAQEKRDLVLEGMLRWAVDIHFRQCSRVLQASLSRAVCDGIRQALDAAELSSARLSPPCFALGCRLLLSFVGGLAGDGGAQAASFLQERCGTELRLFLARARFRPLS---RGR----TCTGSRAATGVPARRLPELPVLDAYVGHLCLCRHVSDALASRHLDWLARQALVVLRLLDGDXXXXXXXXEPAGATKSAETFGALVSLSHALALLLTRPKRGPGVGPVGGVTEVSGNLLEIVFDSDPRPLSGVPPLLAEAAIDALKAAGHLQLAQPDEFLRPPLAPTRPEGSRRRVPNVVGREL-----PGAANASSDGASFADGIEFRRASVAFRNSWSLAKAGLDPHLPVLE--SRKRRLDSDGDSGXXXXXXXX-----DGDLDG-GSVVGSGWGRVPDEVALRVFSFLTPKRVCRLACVDRAWKELLMVPRVWRPFFEARWPVTVIESEEDVAGVTDRLLLEGLGSEERAKRKNKRRRTRDGVVRWRLAD 738
DDS L+ E +EA R S C+SC+A N DA ++P CC+AQEKRD+VLE MLRWAVD+HFRQCSR+LQAS++RAVC G+RQAL AAELS + SPP F GCRLLLSFVGGLAGDGGAQ A FL+ERCG ELR FLAR R+RP S RGR TCT A G A R E P+LDAYVGHLCLCRHVSD LA+ HL WLARQAL VLR+LD A +S+ L SLSHALALLLTRPKRG V E +GNLLEIVFDSD RPLS VP LAEAAID LK AGH+QLA+ DE LRPP GSRR PN GR P AA + +GASFA GI+FRRAS+AFR++WSLA AG+D LP R RR D GDS XXXXXXXX DGD+DG G++ G+GWGRVPDEV +RV SF+TPKRVCRLACVDRAW+ELLMV VWRPFFEARWP++ I S+ D+AGV+DRLL EGLGS R K K +RR + GVV WR +
Sbjct: 33 DDSLALEAEGEEAQGTRRRSRCLSCSAALSDNPAGTDASETEGARPQCCSAQEKRDVVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSMRQASPPSFPPGCRLLLSFVGGLAGDGGAQIAGFLRERCGAELRRFLARGRWRPPSGTCRGRRHADTCT---ATGGAVAGRQAESPMLDAYVGHLCLCRHVSDPLAATHLAWLARQALTVLRMLDMPEEGAHETTAAAERRQSSNFADVLASLSHALALLLTRPKRGGLCSST--VPETAGNLLEIVFDSDARPLSCVPRPLAEAAIDVLKEAGHIQLARSDELLRPP------RGSRRGEPNAAGRRTKSKLGPVAATVTEEGASFASGIDFRRASLAFRSTWSLAAAGVDTQLPSTSRSGRSRRGDGGGDSSXXXXXXXXXXXXADGDVDGAGAIAGNGWGRVPDEVTMRVLSFMTPKRVCRLACVDRAWRELLMVSGVWRPFFEARWPLSAIGSDLDLAGVSDRLLAEGLGSA-RKKAKRRRRHGKIGVVHWRTPE 559 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig76.15230.1 ID=prot_C-linearis_contig76.15230.1|Name=mRNA_C-linearis_contig76.15230.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=833bpback to top |