mRNA_C-linearis_contig76.15230.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig76.15230.1
Unique NamemRNA_C-linearis_contig76.15230.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI)

HSP 1 Score: 773 bits (1995), Expect = 8.110e-266
Identity = 453/707 (64.07%), Postives = 509/707 (71.99%), Query Frame = 1 
Query:  415 ETKGPFLALVSGVQNVLDACPAMPGVALESSIQDCLRRPSPGAAAWSLGAARTFVGGVLSLVSTWRSPRSLSLCQAVVSVLVRFVAEKGCVLADDSPVLDVEEKEAH---RCSLCVSCAAG---NDIVVDAQTAPVSQPLCCNAQEKRDLVLEGMLRWAVDIHFRQCSRVLQASLSRAVCDGIRQALDAAELSSARLSPPCFALGCRLLLSFVGGLAGDGGAQAASFLQERCGTELRLFLARARFRPLS---RGRTCTGSRAATGVP-ARRLPELPVLDAYVGHLCLCRHVSDALASRHLDWLARQALVVLRLLDGDXXXXXXXXEPAGATKSAETFGALVSLSHALALLLTRPKRGPGVGPVGGVTEVSGNLLEIVFDSDPRPLSGVPPLLAEAAIDALKAAGHLQLAQPDEFLRPPLAPTRPEGSRRRVPNVVGREL-----PGAANASSDGASFADGIEFRRASVAFRNSWSLAKAGLDPHLPVLE--SRKRRLDSDGDSGXXXXXXXX-----DGDLDGG-SVVGSGWGRVPDEVALRVFSFLTPKRVCRLACVDRAWKELLMVPRVWRPFFEARWPVTVIESEEDVAGVTDRLLLEGLGSEERAKRKNKRRRTRDGVVRWRLADDT-GPAQP--SREWMVLYRDRHRAERAARGRVAAKTKFGWLVCPFLGCVCSLKSEFAVKRHVQIHKRPVGKRRVVKPK 2457
            +T GPFLALVSG+Q  LDACPAMP + LE+SI+DCLRRPSPGAA W+ G+ R FV GVLSLVS+  SPRSL  CQAVVSVLVRFVA  GC   DDS  LD E +E     R S C+SC+     N    DA     ++P CCNAQEKRDLVLE MLRWAVD+HFRQCSR+LQAS++RAVC G+RQAL AAELS  + SPP F LGCRLLLSFVGGLAGDGGAQ A FL+ERCG E+R FL R R+RP S   RGR    +  ATG   ARR PELP+LDAYVGHLCLCRHVSD L++ HL WLARQAL VLR+LD                +++     L SLSHALALLLTRPKRG     +  V E  GNLLEIVFDSDPRPLS VP  LAEAAID LK AGHLQLA+ DE LR       P GSRR  PN  GR       P AA  + +GASFA GI+F+RAS+AFRNSWSLA AG+D  LP      R RR D  GDS XXXXXXXX     DGD+DG  ++ G+GWGRVPDEV LRVFSF+TPKRVCRLACVDRAW+ELL V  VWRPFFEARWP+T I S+ D+ GV+DRLL EGLGS  R   K +RR  + GVV WR ++DT G  QP   R+WM LYRDRHRAERAARGR AAKT+F WLVCPFLGCV SLKSEFAVKRHV+ HKRP  KR + K K
Sbjct:   10 QTNGPFLALVSGLQGALDACPAMPTLTLETSIEDCLRRPSPGAAVWAFGSTRMFVSGVLSLVSS--SPRSL--CQAVVSVLVRFVAGDGCDTLDDSLALDAEGEETQDRRRRSRCLSCSTALSDNAAGTDASETERARPQCCNAQEKRDLVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSRRQASPPSFPLGCRLLLSFVGGLAGDGGAQIAGFLRERCGAEMRRFLTRGRWRPPSGTARGRRHADAWTATGRGVARRQPELPMLDAYVGHLCLCRHVSDPLSATHLVWLARQALAVLRMLDMPEEGAPGTTAAPERRQNSNFEAVLASLSHALALLLTRPKRGGVCSSI--VPETVGNLLEIVFDSDPRPLSCVPRPLAEAAIDVLKEAGHLQLARSDELLR------LPWGSRRGEPNAAGRREESKLGPVAATVTEEGASFASGIDFQRASLAFRNSWSLAAAGVDMQLPSTNHSGRSRRGDGGGDSXXXXXXXXXXXXSADGDVDGARAIAGNGWGRVPDEVTLRVFSFMTPKRVCRLACVDRAWRELLTVSGVWRPFFEARWPLTAIGSDLDLVGVSDRLLAEGLGSA-RKNAKRRRRHGKIGVVHWRTSEDTSGQQQPLLERDWMALYRDRHRAERAARGRFAAKTEFPWLVCPFLGCVSSLKSEFAVKRHVRTHKRPREKRLMGKKK 703
[Close]
BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Match: A0A6H5JX00_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX00_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 1.140e-180
Identity = 330/539 (61.22%), Postives = 376/539 (69.76%), Query Frame = 1 
Query:  694 DDSPVLDVEEKEAH---RCSLCVSCAAG---NDIVVDAQTAPVSQPLCCNAQEKRDLVLEGMLRWAVDIHFRQCSRVLQASLSRAVCDGIRQALDAAELSSARLSPPCFALGCRLLLSFVGGLAGDGGAQAASFLQERCGTELRLFLARARFRPLS---RGR----TCTGSRAATGVPARRLPELPVLDAYVGHLCLCRHVSDALASRHLDWLARQALVVLRLLDGDXXXXXXXXEPAGATKSAETFGALVSLSHALALLLTRPKRGPGVGPVGGVTEVSGNLLEIVFDSDPRPLSGVPPLLAEAAIDALKAAGHLQLAQPDEFLRPPLAPTRPEGSRRRVPNVVGREL-----PGAANASSDGASFADGIEFRRASVAFRNSWSLAKAGLDPHLPVLE--SRKRRLDSDGDSGXXXXXXXX-----DGDLDG-GSVVGSGWGRVPDEVALRVFSFLTPKRVCRLACVDRAWKELLMVPRVWRPFFEARWPVTVIESEEDVAGVTDRLLLEGLGSEERAKRKNKRRRTRDGVVRWRLAD 2232
            DDS  L+ E +EA    R S C+SC+A    N    DA     ++P CC+AQEKRD+VLE MLRWAVD+HFRQCSR+LQAS++RAVC G+RQAL AAELS  + SPP F  GCRLLLSFVGGLAGDGGAQ A FL+ERCG ELR FLAR R+RP S   RGR    TCT   A  G  A R  E P+LDAYVGHLCLCRHVSD LA+ HL WLARQAL VLR+LD            A   +S+     L SLSHALALLLTRPKRG        V E +GNLLEIVFDSD RPLS VP  LAEAAID LK AGH+QLA+ DE LRPP       GSRR  PN  GR       P AA  + +GASFA GI+FRRAS+AFR++WSLA AG+D  LP      R RR D  GDS XXXXXXXX     DGD+DG G++ G+GWGRVPDEV +RV SF+TPKRVCRLACVDRAW+ELLMV  VWRPFFEARWP++ I S+ D+AGV+DRLL EGLGS  R K K +RR  + GVV WR  +
Sbjct:   33 DDSLALEAEGEEAQGTRRRSRCLSCSAALSDNPAGTDASETEGARPQCCSAQEKRDVVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSMRQASPPSFPPGCRLLLSFVGGLAGDGGAQIAGFLRERCGAELRRFLARGRWRPPSGTCRGRRHADTCT---ATGGAVAGRQAESPMLDAYVGHLCLCRHVSDPLAATHLAWLARQALTVLRMLDMPEEGAHETTAAAERRQSSNFADVLASLSHALALLLTRPKRGGLCSST--VPETAGNLLEIVFDSDARPLSCVPRPLAEAAIDVLKEAGHIQLARSDELLRPP------RGSRRGEPNAAGRRTKSKLGPVAATVTEEGASFASGIDFRRASLAFRSTWSLAAAGVDTQLPSTSRSGRSRRGDGGGDSSXXXXXXXXXXXXADGDVDGAGAIAGNGWGRVPDEVTMRVLSFMTPKRVCRLACVDRAWRELLMVSGVWRPFFEARWPLSAIGSDLDLAGVSDRLLAEGLGSA-RKKAKRRRRHGKIGVVHWRTPE 559
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS3_ECTSI8.110e-26664.07F-box, zinc finger protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5JX00_9PHAE1.140e-18061.22F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:815064..821338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionF-box, zinc finger protein
Ec32 orthologEc-01_000310.1
Exons8
Model size3328
Cds size2499
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15230.1prot_C-linearis_contig76.15230.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig76 815082..820527 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930456.371087-UTR-C-linearis_contig76:815063..8150811622930456.371087-UTR-C-linearis_contig76:815063..815081Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 815064..815081 +
1690881079.086599-UTR-C-linearis_contig76:815063..8150811690881079.086599-UTR-C-linearis_contig76:815063..815081Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 815064..815081 +
1622930456.5057633-UTR-C-linearis_contig76:820527..8213381622930456.5057633-UTR-C-linearis_contig76:820527..821338Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 820528..821338 +
1690881079.2000296-UTR-C-linearis_contig76:820527..8213381690881079.2000296-UTR-C-linearis_contig76:820527..821338Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 820528..821338 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930456.386879-CDS-C-linearis_contig76:815081..8152251622930456.386879-CDS-C-linearis_contig76:815081..815225Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 815082..815225 +
1690881079.0978124-CDS-C-linearis_contig76:815081..8152251690881079.0978124-CDS-C-linearis_contig76:815081..815225Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 815082..815225 +
1622930456.4049833-CDS-C-linearis_contig76:815458..8155681622930456.4049833-CDS-C-linearis_contig76:815458..815568Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 815459..815568 +
1690881079.1080656-CDS-C-linearis_contig76:815458..8155681690881079.1080656-CDS-C-linearis_contig76:815458..815568Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 815459..815568 +
1622930456.4181693-CDS-C-linearis_contig76:816037..8160981622930456.4181693-CDS-C-linearis_contig76:816037..816098Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 816038..816098 +
1690881079.1179678-CDS-C-linearis_contig76:816037..8160981690881079.1179678-CDS-C-linearis_contig76:816037..816098Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 816038..816098 +
1622930456.4296887-CDS-C-linearis_contig76:816795..8168791622930456.4296887-CDS-C-linearis_contig76:816795..816879Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 816796..816879 +
1690881079.128802-CDS-C-linearis_contig76:816795..8168791690881079.128802-CDS-C-linearis_contig76:816795..816879Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 816796..816879 +
1622930456.442513-CDS-C-linearis_contig76:817277..8175541622930456.442513-CDS-C-linearis_contig76:817277..817554Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 817278..817554 +
1690881079.1375842-CDS-C-linearis_contig76:817277..8175541690881079.1375842-CDS-C-linearis_contig76:817277..817554Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 817278..817554 +
1622930456.4594553-CDS-C-linearis_contig76:817958..8194961622930456.4594553-CDS-C-linearis_contig76:817958..819496Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 817959..819496 +
1690881079.1559436-CDS-C-linearis_contig76:817958..8194961690881079.1559436-CDS-C-linearis_contig76:817958..819496Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 817959..819496 +
1622930456.472228-CDS-C-linearis_contig76:819794..8199621622930456.472228-CDS-C-linearis_contig76:819794..819962Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 819795..819962 +
1690881079.1727781-CDS-C-linearis_contig76:819794..8199621690881079.1727781-CDS-C-linearis_contig76:819794..819962Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 819795..819962 +
1622930456.4863718-CDS-C-linearis_contig76:820410..8205271622930456.4863718-CDS-C-linearis_contig76:820410..820527Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 820411..820527 +
1690881079.1858804-CDS-C-linearis_contig76:820410..8205271690881079.1858804-CDS-C-linearis_contig76:820410..820527Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 820411..820527 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig76.15230.1

>prot_C-linearis_contig76.15230.1 ID=prot_C-linearis_contig76.15230.1|Name=mRNA_C-linearis_contig76.15230.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=833bp
MAQAEGWERLGELSRLLQAFRRMYIRREVEEDNPSLLKWRHKLVDFLKGL
LLSCEVQGAREDGAWVHFRFEGPLSKVLGHSCCDWSSLDAFGCGLMSEVL
DALSQVQSELPVSTPAIVHVLLHRMAIVRPGKETKGPFLALVSGVQNVLD
ACPAMPGVALESSIQDCLRRPSPGAAAWSLGAARTFVGGVLSLVSTWRSP
RSLSLCQAVVSVLVRFVAEKGCVLADDSPVLDVEEKEAHRCSLCVSCAAG
NDIVVDAQTAPVSQPLCCNAQEKRDLVLEGMLRWAVDIHFRQCSRVLQAS
LSRAVCDGIRQALDAAELSSARLSPPCFALGCRLLLSFVGGLAGDGGAQA
ASFLQERCGTELRLFLARARFRPLSRGRTCTGSRAATGVPARRLPELPVL
DAYVGHLCLCRHVSDALASRHLDWLARQALVVLRLLDGDGDGDGDGDEPA
GATKSAETFGALVSLSHALALLLTRPKRGPGVGPVGGVTEVSGNLLEIVF
DSDPRPLSGVPPLLAEAAIDALKAAGHLQLAQPDEFLRPPLAPTRPEGSR
RRVPNVVGRELPGAANASSDGASFADGIEFRRASVAFRNSWSLAKAGLDP
HLPVLESRKRRLDSDGDSGGDDGSDSDDGDLDGGSVVGSGWGRVPDEVAL
RVFSFLTPKRVCRLACVDRAWKELLMVPRVWRPFFEARWPVTVIESEEDV
AGVTDRLLLEGLGSEERAKRKNKRRRTRDGVVRWRLADDTGPAQPSREWM
VLYRDRHRAERAARGRVAAKTKFGWLVCPFLGCVCSLKSEFAVKRHVQIH
KRPVGKRRVVKPKPADKSGTTRSFSDTRRRPP*
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mRNA from alignment at C-linearis_contig76:815064..821338+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig76.15230.1 ID=mRNA_C-linearis_contig76.15230.1|Name=mRNA_C-linearis_contig76.15230.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6275bp|location=Sequence derived from alignment at C-linearis_contig76:815064..821338+ (Chordaria linearis ClinC8C monoicous)
CGGCCACTGGCCGGATGCATGGCGCAAGCGGAGGGCTGGGAGCGGCTGGG
AGAGCTATCGCGACTACTGCAGGCGTTTCGGCGCATGTATATTCGCCGAG
AGGTGGAGGAAGATAACCCAAGTTTGCTGAAGTGGAGACACAAGCTTGTT
GATTTCTTGAAGGTGAGGAAGCACTGCTGCTGCTCTCCCCCCCTATAGCA
AGCATCGTGACCTGGACGCGTGGACCGCTACGAGCCGCCCAGACTATCTA
GGGTCGTGTTGTCTGCTGTGGCACGGATTTCGAAGGACTTTGAACTGGCG
TAGTGTTCATTCAACGAGTCAACAGGTTCTACAAGCGTGCTGCAACGCCC
GCCGCACGCTGTTGTCGCTTTGTCCCGCACAAACCGCACAAACAGGGACT
GCTCTTGAGCTGTGAGGTGCAGGGAGCACGAGAGGACGGCGCGTGGGTCC
ACTTCCGTTTCGAGGGTCCTCTTTCGAAGGTGCTGGGGCACAGCTGCTGC
GACTGGTGCGTGACTTGCGTGCGTTCGTGCGTACTCCAGCGACAGCAATC
AGAGAGCCCCGGCGTATTCTTGTGCACTGCTGCTTGGTACATTCGAAGTA
GGATGTACGTGCACGGTTTCGGTTACCGCTCTCTTTTGCCCCATATCAGA
CATACATACGTTGCCACCATCAATAAATACAGCACGTGTGAGCGACGTAG
CTGCGCGTCGGAGCATACAAGAAGAATGTTGATGTTCCCACCTTGTCTTA
CTACTATGGTATCCCGTTCGTTGTGTAAGATAAAGCAGGGATCGACCGCA
TCAAGATCCAGCTCGCTGAGGTCTCCCACCTACAGCAGTAGCGCGCCATC
TACCCTGGTCGCCGTCTTGCGACCGTTCTTGATGTCTATCCTTTGCCATT
CATCCAAGCACCATGCCTTCTTCCTCCGTTGTGTTTTTGTTCGTGTCTCT
GCGCGATGACCCTCTCCCATTCAGGTCTTCACTGGATGCGTTTGGATGCG
GTTTGATGTCGGAAGTGTTGGACGCACTTAGTCAGGTGCGGCTAACAATT
CAACTCCGTCGTTCTGTGCGAGCTACGGCGTATTTTTCGATTGCACGGCG
TGTGTCTCACTGATAATATCCGCTGTACCTACGATGGCGGCTCTTTTCTG
CACTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTCCTCACATTCAAAACCACCCCGCTCTCTCCACGCAGTACC
CTTTGTCCGTACTGATCCAGCAGACACGGCCAATTCCCGTGGTCAAAGGT
TAACTTACCATAAAAAGCTACACTAAAATGAACCGGAAGGGTCAGTAGAG
CGATCACTTCAAAACAAAATCAGAACAAATAGTCTGGAGCCCTCCACTCC
CCTCTACACGCTATGCGAGGCAAAATAAAAATATACTGGAGACATCAAAA
TCACCAACCCCGGGGGTTCACACCCCCAGGTCCTATCTTTATTACCCCTA
CACTGTCAGGGTATTCCGTGCCGGGTTCTCGCCGGCCAGGCAGACAAATC
GAGCACTGGTAAAATAAATAGCTGGAACTTGAATCAGTCCTTAGCTCGAT
TGAAACTACCGCGTACAGTACGCGTTTAGTGTCTACAGCAGTACTACGAT
GCGGTGCACATAGTTGTCGGTGTCAAATCATCGAAATATCTGTGCTGAGT
ACTCTGCGTACATAACGACCACGCTGGTGCAGGTGCAGTCAGAGCTACCG
GTGTCCACGCCCGCGATAGTCCATGTCCTGCTGCATCGAATGGCCATCGT
CCGTCCAGGCAAAGAGGTGAGATGCGCCGAACTGTGGAACGAATATGGAC
CTTTCGTGCACGATGGGTGTCTCTGGAATGGCGATGAGACTCCTACAGAG
TTGATAGCTCATGCATGTCCCTTACGTGGCCACCTGGTAGAGACCAACCC
AAGTTGCTGCCCCTTGATTGGCAACTGGCTGATGTCATCGATTGTTGCTG
TCCTACCTCGACTTCCTTCGCAGTGCACCTTTGCTGCTGAAAATGCTGTC
AGTCCTACTCGCATATCATACCACGCGATGCTGTGCCATCGCATGTCATC
GAGCTTACCCGTTTCAGTCTGCTACAGCAGTAGAATCTCTCACGCCGCCA
ACACACCCACACGCCTGCCGCGTACGTATTCCACCTCTAATACCATTCAA
TCCCCAATCCCCAGACCAAGGGGCCCTTTCTCGCGCTGGTGTCGGGTGTA
CAAAACGTACTCGACGCCTGCCCCGCTATGCCCGGTGTAGCCCTGGAGAG
CTCGATCCAAGACTGCCTCCGCCGGCCCTCCCCGGGTGCGGCAGCCTGGT
CGCTAGGCGCAGCTCGGACGTTTGTGGGCGGGGTGCTGTCCTTGGTCTCG
ACATGGAGATCCCCGCGGTCTTTGTCTCTGTGCCAAGCGGTGGTATCGGT
GCTGGTGCGCTTTGTGGCGGAGAAGGGATGCGTGTTGGCCGGTGAGTCGT
TGGTTTGGTTCGGTTTGGTTCGGTTTGGTTCGGTTTGGAATCGGGCTACG
TTGTCAGCACTCGAAACGATTATGCAGCTCGCGAAACCGTTGCAGATTTC
TTTTTTTGCCGTGTGCTGCGCTAGTGAATCTGAAGTTATGTTTTTATGAA
GCCCTATTCTCCTACCTTGGCCTGTTCTTCAATTTCAATGGACAAGGTTT
CTTCCTGCCTGCGTCAAAGGATGTCGCTATTGTGCGAAGCATCTTGCTGC
CTATCAGCCTGAGTGCTTCCGTGGTAGCCCTCTCCCGGGAAGATCGCGAA
TAGGCTACATACTTCGAAGTGTGTACTCGCGCACGCCGGTGTAGCAGACC
CTCATCATTTTCCCATCATTTTCCCTTGACTTGCAACCTCGGCAGATGAC
TCCCCAGTGCTGGATGTGGAGGAGAAGGAGGCGCACCGCTGCTCGCTATG
CGTTTCGTGCGCGGCAGGCAACGACATCGTGGTTGATGCTCAAACGGCGC
CAGTGTCTCAACCGCTGTGCTGCAACGCGCAAGAAAAGAGGGATCTGGTG
CTCGAGGGTATGCTGAGGTGGGCGGTGGATATCCACTTCCGGCAGTGCTC
TCGTGTCCTCCAAGCTTCGCTGAGTCGCGCTGTTTGCGACGGGATTCGGC
AAGCGCTGGACGCTGCCGAGCTCTCGTCCGCACGATTATCACCTCCCTGT
TTCGCGCTCGGGTGTAGACTGCTGCTGTCGTTCGTTGGAGGGCTTGCGGG
GGACGGCGGTGCGCAGGCCGCCTCGTTTCTGCAGGAGCGGTGCGGGACCG
AGCTGCGGCTGTTTCTCGCTCGCGCGCGGTTTAGGCCTTTATCTAGGGGA
AGAACATGCACAGGCAGTCGTGCCGCTACAGGGGTGCCAGCACGGCGACT
ACCGGAGCTACCCGTGCTAGATGCGTACGTGGGCCACCTTTGCCTCTGTC
GGCACGTGAGCGACGCACTGGCCTCGAGGCATCTGGACTGGCTGGCTCGA
CAAGCGCTCGTCGTCCTCCGCCTCCTGGACGGGGACGGGGATGGGGATGG
GGATGGCGATGAACCGGCTGGCGCAACGAAGAGCGCAGAAACCTTCGGGG
CGTTGGTTTCTCTCTCGCACGCTCTTGCTCTGCTGCTGACCCGGCCGAAG
CGAGGCCCCGGCGTTGGCCCTGTCGGAGGCGTGACCGAAGTGTCCGGCAA
CCTGCTCGAGATCGTTTTCGATAGTGACCCCCGCCCGTTGTCGGGCGTGC
CCCCCCTGCTGGCAGAGGCGGCCATCGACGCCCTGAAAGCGGCCGGCCAT
CTGCAGCTCGCCCAACCGGATGAGTTCTTGAGACCGCCGCTGGCACCGAC
GAGGCCAGAGGGGTCCCGCAGAAGGGTACCGAACGTGGTGGGCCGTGAAC
TACCAGGTGCAGCGAACGCCAGCAGCGACGGTGCTTCTTTCGCTGATGGC
ATCGAGTTCCGCCGCGCAAGCGTCGCCTTCAGGAATAGCTGGTCTCTCGC
GAAGGCGGGGTTGGACCCGCATCTTCCCGTGCTAGAAAGCCGGAAGAGAC
GGTTAGACAGCGACGGAGACAGCGGCGGTGACGACGGCTCCGACTCGGAC
GATGGAGATTTGGACGGCGGCTCGGTCGTTGGAAGCGGCTGGGGCCGAGT
GCCCGACGAGGTGGCGCTTCGCGTGTTTTCCTTCCTGACTCCGAAGCGCG
TCTGCCGCCTCGCTTGCGTGGACCGTGCGTGGAAGGAGCTGCTCATGGTG
CCCAGGGTATGGAGGCCCTTCTTCGAGGCTCGCTGGCCGGTGACGGTGAT
TGAGAGCGAGGAGGATGTAGCTGGAGTGACGGATAGGCTCTTGCTGGAAG
GGTTGGGCTCGGAGGAAAGGGCGAAGCGCAAGAATAAACGGAGAAGGACG
AGGGATGGCGTTGTTCGCTGGCGCCTTGCAGATGTGAGCCAGCGACACAT
AACATAACATACCTCTGTATCGTGATTATATTATTTTTTGTCGTGATATC
GTGATTGTTGTTTTGTAAGAATTGACCGCTGCCACCGCTTTTGTATCGTT
GCGGTGCTTCGCTTGTTTCGTGCAAATATCCCTAGATCGTCTGTCCTTCG
AAAATCAAGTGTCTGTGCTCGGCTCTGCATATGTAGATACCGTGTGGAGC
CCAGCTTTTGTATCACGACGCTGGAAGGTTTGATGAATGTTGAACACGCT
CTTGAATACCGAAACCTGCTTTGCCGCGCAGGATACCGGGCCTGCGCAGC
CGTCGCGAGAATGGATGGTGCTGTACCGAGATCGGCACAGGGCGGAACGG
GCAGCTCGAGGGAGAGTTGCTGCCAAAACCAAGTTTGGCTGGCTCGTGTG
TCCGTTCCTGGGATGTGTGTGCTCGCTCAAGTCCGAGTTTGCTGTAAAGG
TGAGAGAAGAGTCTATCGGGACGGGGTATGTTCAAGGAAATAACCCTTCC
TCTTGTGGAGAGCAGGATCCTGGGTGACGTCACGTGCAGAAGTCTCATCC
GTTACGAACTACGGAGTACCATACTTTTGCAGATCGGTTTCAATGCGTTG
CGAGATATAGATGTCACATCGGCTCAAATGCATAGTCTATGCATGTTCCA
CCGCCGCGCAGAGGCTGGAAGTGGATGCACCTCTTGGATCAGGTTCCGCA
AAAAAGAGTGCCCTGTTGAGCAGAAGGCTGCGCAACGGAAACGTCGACGC
CGTTGAAGCTTCCCCCTACAACAACAACAACAACAACAACAACAACAAAA
ACAACAACACCCTCAACAGCGCTGAACGCCACTTTTCGCTGCTTTCGTCT
CGTGCCATGCTGCTGGTATTTTGTTGCCCGTTTCTCCCACCCCACAGCGC
CACGTCCAGATACACAAGCGGCCAGTTGGGAAACGGCGAGTTGTGAAACC
CAAGCCAGCAGACAAGTCAGGCACGACAAGGTCATTTTCAGACACAAGAA
GGCGCCCGCCTTGAGTGATGGCCTATTGACTTGGAGGCTTGAAGGTTCAT
TCCTGGGGTATGGGTGACGGTGGCTTCGAGAGTACATGTACAGGTCTGAG
AACCTTTGTCTTTTGAGTTCGGCGTCTTGAACTAGGGAAAGTGCCTATTT
AGTTCTACACGACGAAGTTGAACAGAGGCTCAAGACATGTGCTCTCCAAG
CGATCTCTCGATACACCCAGAGGTTCGTCTTCGCCAAAACGATGTGCTTG
TCCCACACCCAAGGAGTCAGGTACGACAGAGCGGCCAAGAACGGCCACTG
CCCGATGATTCAGCAGTCACTGCTGTGCCCGATACCATTCACCGCCTAGA
CGTGAGCAGAGAAACATTGCCCGATACTCAACGCCTTTCCCCCCCCTCCT
GGGGTGGAGGGGAGGGCTGCGCCGCGACGCGGCTCATTACAAAGATAAAC
ATGTCCGCTCGTTGACGCCAGCCTTTTTCCCTGTTTCGCGTGGTGGCTCG
AATGCCCCTGTTATGGTGGAGGATTGCCCCAGAGATCGGCTGAAACATTA
ACATTTGTACTGTTTGGAGTCACTCAAGAAGCGTCCTGATTTTTTGTTCT
TTTTTCTCGCACCAAGGTTTTTTTGTGTGCGTTGCCCAAGCCCGGTCTTT
ATATCTTTCTGGCTCAAGTTCCATGGAATGGTTGTTGGGCGGAAGGTAAT
TTTGAGCAAGCTTGGATGTTTCGAATGCAACGTGTGGTACGAGCAAGACA
CCTTCTCAGGTTGGGTGTATCGGCGGAATGAAATGCCGTCCCGTATGAAA
CTCATGCTTTCGCCGTCTTTCGTTC
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Coding sequence (CDS) from alignment at C-linearis_contig76:815064..821338+

>mRNA_C-linearis_contig76.15230.1 ID=mRNA_C-linearis_contig76.15230.1|Name=mRNA_C-linearis_contig76.15230.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4998bp|location=Sequence derived from alignment at C-linearis_contig76:815064..821338+ (Chordaria linearis ClinC8C monoicous)
ATGGCGCAAGCGGAGGGCTGGGAGCGGCTGGGAGAGCTATCGCGACTACT
GCAGGCGTTTCGGCGCATGTATATTCGCCGAGAGGTGGAGGAAGATAACC
CAAGTTTGCTGAAGTGGAGACACAAGCTTGTTGATTTCTTGAAGATGGCG
CAAGCGGAGGGCTGGGAGCGGCTGGGAGAGCTATCGCGACTACTGCAGGC
GTTTCGGCGCATGTATATTCGCCGAGAGGTGGAGGAAGATAACCCAAGTT
TGCTGAAGTGGAGACACAAGCTTGTTGATTTCTTGAAGGGACTGCTCTTG
AGCTGTGAGGTGCAGGGAGCACGAGAGGACGGCGCGTGGGTCCACTTCCG
TTTCGAGGGTCCTCTTTCGAAGGTGCTGGGGCACAGCTGCTGCGACTGGG
ACTGCTCTTGAGCTGTGAGGTGCAGGGAGCACGAGAGGACGGCGCGTGGG
TCCACTTCCGTTTCGAGGGTCCTCTTTCGAAGGTGCTGGGGCACAGCTGC
TGCGACTGGTCTTCACTGGATGCGTTTGGATGCGGTTTGATGTCGGAAGT
GTTGGACGCACTTAGTCAGGTCTTCACTGGATGCGTTTGGATGCGGTTTG
ATGTCGGAAGTGTTGGACGCACTTAGTCAGGTGCAGTCAGAGCTACCGGT
GTCCACGCCCGCGATAGTCCATGTCCTGCTGCATCGAATGGCCATCGTCC
GTCCAGGCAAAGAGGTGCAGTCAGAGCTACCGGTGTCCACGCCCGCGATA
GTCCATGTCCTGCTGCATCGAATGGCCATCGTCCGTCCAGGCAAAGAGAC
CAAGGGGCCCTTTCTCGCGCTGGTGTCGGGTGTACAAAACGTACTCGACG
CCTGCCCCGCTATGCCCGGTGTAGCCCTGGAGAGCTCGATCCAAGACTGC
CTCCGCCGGCCCTCCCCGGGTGCGGCAGCCTGGTCGCTAGGCGCAGCTCG
GACGTTTGTGGGCGGGGTGCTGTCCTTGGTCTCGACATGGAGATCCCCGC
GGTCTTTGTCTCTGTGCCAAGCGGTGGTATCGGTGCTGGTGCGCTTTGTG
GCGGAGAAGGGATGCGTGTTGGCCGACCAAGGGGCCCTTTCTCGCGCTGG
TGTCGGGTGTACAAAACGTACTCGACGCCTGCCCCGCTATGCCCGGTGTA
GCCCTGGAGAGCTCGATCCAAGACTGCCTCCGCCGGCCCTCCCCGGGTGC
GGCAGCCTGGTCGCTAGGCGCAGCTCGGACGTTTGTGGGCGGGGTGCTGT
CCTTGGTCTCGACATGGAGATCCCCGCGGTCTTTGTCTCTGTGCCAAGCG
GTGGTATCGGTGCTGGTGCGCTTTGTGGCGGAGAAGGGATGCGTGTTGGC
CGATGACTCCCCAGTGCTGGATGTGGAGGAGAAGGAGGCGCACCGCTGCT
CGCTATGCGTTTCGTGCGCGGCAGGCAACGACATCGTGGTTGATGCTCAA
ACGGCGCCAGTGTCTCAACCGCTGTGCTGCAACGCGCAAGAAAAGAGGGA
TCTGGTGCTCGAGGGTATGCTGAGGTGGGCGGTGGATATCCACTTCCGGC
AGTGCTCTCGTGTCCTCCAAGCTTCGCTGAGTCGCGCTGTTTGCGACGGG
ATTCGGCAAGCGCTGGACGCTGCCGAGCTCTCGTCCGCACGATTATCACC
TCCCTGTTTCGCGCTCGGGTGTAGACTGCTGCTGTCGTTCGTTGGAGGGC
TTGCGGGGGACGGCGGTGCGCAGGCCGCCTCGTTTCTGCAGGAGCGGTGC
GGGACCGAGCTGCGGCTGTTTCTCGCTCGCGCGCGGTTTAGGCCTTTATC
TAGGGGAAGAACATGCACAGGCAGTCGTGCCGCTACAGGGGTGCCAGCAC
GGCGACTACCGGAGCTACCCGTGCTAGATGCGTACGTGGGCCACCTTTGC
CTCTGTCGGCACGTGAGCGACGCACTGGCCTCGAGGCATCTGGACTGGCT
GGCTCGACAAGCGCTCGTCGTCCTCCGCCTCCTGGACGGGGACGGGGATG
GGGATGGGGATGGCGATGAACCGGCTGGCGCAACGAAGAGCGCAGAAACC
TTCGGGGCGTTGGTTTCTCTCTCGCACGCTCTTGCTCTGCTGCTGACCCG
GCCGAAGCGAGGCCCCGGCGTTGGCCCTGTCGGAGGCGTGACCGAAGTGT
CCGGCAACCTGCTCGAGATCGTTTTCGATAGTGACCCCCGCCCGTTGTCG
GGCGTGCCCCCCCTGCTGGCAGAGGCGGCCATCGACGCCCTGAAAGCGGC
CGGCCATCTGCAGCTCGCCCAACCGGATGAGTTCTTGAGACCGCCGCTGG
CACCGACGAGGCCAGAGGGGTCCCGCAGAAGGGTACCGAACGTGGTGGGC
CGTGAACTACCAGGTGCAGCGAACGCCAGCAGCGACGGTGCTTCTTTCGC
TGATGGCATCGAGTTCCGCCGCGCAAGCGTCGCCTTCAGGAATAGCTGGT
CTCTCGCGAAGGCGGGGTTGGACCCGCATCTTCCCGTGCTAGAAAGCCGG
AAGAGACGGTTAGACAGCGACGGAGACAGCGGCGGTGACGACGGCTCCGA
CTCGGACGATGGAGATTTGGACGGCGGCTCGGTCGTTGGAAGCGGCTGGG
GCCGAGTGCCCGACGAGGTGGCGCTTCGCGTGTTTTCCTTCCTGACTCCG
AAGCGCGTCTGCCGCCTCGCTTGCGTGGACCGTGCGTGGAAGGAGCTGCT
CATGGTGCCCAGGGTATGGAGGCCCTTCTTCGAGGCTCGCTGGCCGGTGA
CGGTGATTGAGAGCGAGGAGGATGTAGCTGGAGTGACGGATAGGCTCTTG
CTGGAAGGGTTGGGCTCGGAGGAAAGGGCGAAGCGCAAGAATAAACGGAG
AAGGACGAGGGATGGCGTTGTTCGCTGGCGCCTTGCAGATATGACTCCCC
AGTGCTGGATGTGGAGGAGAAGGAGGCGCACCGCTGCTCGCTATGCGTTT
CGTGCGCGGCAGGCAACGACATCGTGGTTGATGCTCAAACGGCGCCAGTG
TCTCAACCGCTGTGCTGCAACGCGCAAGAAAAGAGGGATCTGGTGCTCGA
GGGTATGCTGAGGTGGGCGGTGGATATCCACTTCCGGCAGTGCTCTCGTG
TCCTCCAAGCTTCGCTGAGTCGCGCTGTTTGCGACGGGATTCGGCAAGCG
CTGGACGCTGCCGAGCTCTCGTCCGCACGATTATCACCTCCCTGTTTCGC
GCTCGGGTGTAGACTGCTGCTGTCGTTCGTTGGAGGGCTTGCGGGGGACG
GCGGTGCGCAGGCCGCCTCGTTTCTGCAGGAGCGGTGCGGGACCGAGCTG
CGGCTGTTTCTCGCTCGCGCGCGGTTTAGGCCTTTATCTAGGGGAAGAAC
ATGCACAGGCAGTCGTGCCGCTACAGGGGTGCCAGCACGGCGACTACCGG
AGCTACCCGTGCTAGATGCGTACGTGGGCCACCTTTGCCTCTGTCGGCAC
GTGAGCGACGCACTGGCCTCGAGGCATCTGGACTGGCTGGCTCGACAAGC
GCTCGTCGTCCTCCGCCTCCTGGACGGGGACGGGGATGGGGATGGGGATG
GCGATGAACCGGCTGGCGCAACGAAGAGCGCAGAAACCTTCGGGGCGTTG
GTTTCTCTCTCGCACGCTCTTGCTCTGCTGCTGACCCGGCCGAAGCGAGG
CCCCGGCGTTGGCCCTGTCGGAGGCGTGACCGAAGTGTCCGGCAACCTGC
TCGAGATCGTTTTCGATAGTGACCCCCGCCCGTTGTCGGGCGTGCCCCCC
CTGCTGGCAGAGGCGGCCATCGACGCCCTGAAAGCGGCCGGCCATCTGCA
GCTCGCCCAACCGGATGAGTTCTTGAGACCGCCGCTGGCACCGACGAGGC
CAGAGGGGTCCCGCAGAAGGGTACCGAACGTGGTGGGCCGTGAACTACCA
GGTGCAGCGAACGCCAGCAGCGACGGTGCTTCTTTCGCTGATGGCATCGA
GTTCCGCCGCGCAAGCGTCGCCTTCAGGAATAGCTGGTCTCTCGCGAAGG
CGGGGTTGGACCCGCATCTTCCCGTGCTAGAAAGCCGGAAGAGACGGTTA
GACAGCGACGGAGACAGCGGCGGTGACGACGGCTCCGACTCGGACGATGG
AGATTTGGACGGCGGCTCGGTCGTTGGAAGCGGCTGGGGCCGAGTGCCCG
ACGAGGTGGCGCTTCGCGTGTTTTCCTTCCTGACTCCGAAGCGCGTCTGC
CGCCTCGCTTGCGTGGACCGTGCGTGGAAGGAGCTGCTCATGGTGCCCAG
GGTATGGAGGCCCTTCTTCGAGGCTCGCTGGCCGGTGACGGTGATTGAGA
GCGAGGAGGATGTAGCTGGAGTGACGGATAGGCTCTTGCTGGAAGGGTTG
GGCTCGGAGGAAAGGGCGAAGCGCAAGAATAAACGGAGAAGGACGAGGGA
TGGCGTTGTTCGCTGGCGCCTTGCAGATGATACCGGGCCTGCGCAGCCGT
CGCGAGAATGGATGGTGCTGTACCGAGATCGGCACAGGGCGGAACGGGCA
GCTCGAGGGAGAGTTGCTGCCAAAACCAAGTTTGGCTGGCTCGTGTGTCC
GTTCCTGGGATGTGTGTGCTCGCTCAAGTCCGAGTTTGCTGTAAAGGATA
CCGGGCCTGCGCAGCCGTCGCGAGAATGGATGGTGCTGTACCGAGATCGG
CACAGGGCGGAACGGGCAGCTCGAGGGAGAGTTGCTGCCAAAACCAAGTT
TGGCTGGCTCGTGTGTCCGTTCCTGGGATGTGTGTGCTCGCTCAAGTCCG
AGTTTGCTGTAAAGCGCCACGTCCAGATACACAAGCGGCCAGTTGGGAAA
CGGCGAGTTGTGAAACCCAAGCCAGCAGACAAGTCAGGCACGACAAGGTC
ATTTTCAGACACAAGAAGGCGCCCGCCTTGACGCCACGTCCAGATACACA
AGCGGCCAGTTGGGAAACGGCGAGTTGTGAAACCCAAGCCAGCAGACAAG
TCAGGCACGACAAGGTCATTTTCAGACACAAGAAGGCGCCCGCCTTGA
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