prot_C-linearis_contig76.15154.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15154.1
Unique Nameprot_C-linearis_contig76.15154.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length242
Homology
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 4.570e-71
Identity = 163/224 (72.77%), Postives = 172/224 (76.79%), Query Frame = 0
Query:   20 GAAAVTPGQGTDPEQPIPASGERGTVGVGAREEECTAPATAATGEKGRQAPPATPAPAAAPQGVGCISXXXXXXXXXXXXXXTAIDGAMSVSAAGAAGARGVQVVSSSNLNLLATICLLEENVI-------GGGDGANHDETVPIEEVAPDLSQELEATQVTGTQPDEAVAAPASAQAVVETVTPGQDTEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSS 236
            GAA VTPGQGTDPEQP+PASGERGTV VGAR EECTAPAT                      G GCISXXXXXXXXXXX   TAID A SVSAAG AGA GV++ SSSNLNLLAT+CLLEEN         GGGDGANHDETVPI + APDLSQEL  TQVTGTQPDEA+AAPASAQ VVETVTPGQDTER+QP+PASEALVAG V VQAAGEA AG+VMPT S
Sbjct:  432 GAAVVTPGQGTDPEQPVPASGERGTV-VGARAEECTAPAT----------------------GGGCISXXXXXXXXXXXESGTAIDAATSVSAAGTAGAGGVEMASSSNLNLLATVCLLEENGSCGGIESGGGGDGANHDETVPIGDCAPDLSQELAVTQVTGTQPDEALAAPASAQVVVETVTPGQDTERQQPLPASEALVAGGVEVQAAGEAGAGDVMPTLS 632          
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 2.240e-65
Identity = 158/246 (64.23%), Postives = 170/246 (69.11%), Query Frame = 0
Query:    5 QEYAIPVAEADSDDDGAAAVTPGQGTDPEQPIPASGERGTVGVGAREEECTAPATAATGEKGRQAPPATPAPAAAPQGVGCISXXXXXXXXXXXXXXTAIDGAMSVSAAG-AAGARGVQVVSSSNLNLLATICLLEENVI-------GGGDGANHDETVPIEEVAPDLSQELEATQVTGTQPDEAVAAP-ASAQAVVETVTPGQDTEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSSELGGV 241
            +EYA+PVAEADSDDDGAA V PGQGTDP QP+PASGERG V +GAR EECTAPAT                      G   IS     XXXXXX   TA D A SVSAAG AAGA G+++ SSSNL LLAT+C+  EN         GGGDGANHDETVPIE+ APD SQEL  TQVTGTQPDEAVAA  ASAQAVVET TP QDTEREQP+P  EALVAG V VQ  GEA AG+VM TSS   GV
Sbjct:  463 EEYAVPVAEADSDDDGAAVVPPGQGTDPAQPVPASGERGRVEIGARGEECTAPAT----------------------GGWFISRSGGGXXXXXXESGTAKDAATSVSAAGPAAGAGGLEMASSSNLQLLATVCVRAENESYGGIESGGGGDGANHDETVPIEDGAPDFSQELAVTQVTGTQPDEAVAAASASAQAVVETATPVQDTEREQPLPPREALVAGGVEVQVVGEAGAGDVMRTSSGSVGV 686          
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 8.950e-37
Identity = 119/229 (51.97%), Postives = 129/229 (56.33%), Query Frame = 0
Query:   20 GAAAVTPGQGTDPEQPIPASGERGTVGVGAREEECTAPATAATGEKGRQAPPATPAPAAAPQGVGCISXXXXXXXXXXXXXXTAIDGAMSVSAAGAAGARGVQVVSSSNLNLLATICLLEENVI-------GGGDGANHDETVPIEEVAPDLSQELEATQVTGTQPDEAVAAPASAQAVVETVTPGQDTEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSSELGGV 241
            GAA VTPGQG DPEQ + ASGERGTV  GAREEECTAPAT                      G GCIS XXXXXXXXXX   TAID A SVSAA      GV++ SSSNL LLAT+CLLEEN          GGDGA H+ETVPIE+ APDLSQEL ATQV G+QP                                  +V GDV VQAAGEA   ++MPTS E   V
Sbjct:  352 GAAVVTPGQGADPEQSVLASGERGTVEDGAREEECTAPAT----------------------GGGCISSXXXXXXXXXXESGTAIDAATSVSAAXXXXXGGVEMASSSNLELLATVCLLEENGSCGGIESGDGGDGARHEETVPIEDGAPDLSQELVATQVNGSQP----------------------------------VVEGDVTVQAAGEAGTVDMMPTSVESADV 524          
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 6.290e-32
Identity = 84/126 (66.67%), Postives = 90/126 (71.43%), Query Frame = 0
Query:  123 VVSSSNLNLLATICLLEENVI-------GGGDGANHDETVPIEEVAPDLSQELEATQVTGTQPDEAVAAPASAQAVVETVTPGQDTEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSSELGGV 241
            + SSSNLNLLAT+CLLE N         GGGDGAN DETVPIE+ A DLSQEL AT+VT TQPDE VAAPASA          QDTE EQP PAS+ALVAG VAVQAAGEA A +VMPTS    GV
Sbjct:    1 MASSSNLNLLATVCLLEGNGSCGGIESGGGGDGANRDETVPIEDGALDLSQELAATRVTSTQPDEPVAAPASA----------QDTECEQPSPASDALVAGGVAVQAAGEAGADDVMPTSRGSAGV 116          
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.840e-26
Identity = 72/90 (80.00%), Postives = 75/90 (83.33%), Query Frame = 0
Query:  153 ETVPIEEVAPDLSQELEATQVTGTQPDEAVAAP-ASAQAVVETVTPGQDTEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSSELGGV 241
            ETVPI + APDLSQEL ATQVTGTQPDEAVAA  AS QAVVET TPGQDTE EQP+PASEALVAGDV VQAAGEA A +VM TSS   GV
Sbjct:   28 ETVPIGDDAPDLSQELAATQVTGTQPDEAVAAASASPQAVVETATPGQDTEHEQPLPASEALVAGDVGVQAAGEAGAADVMLTSSGSVGV 117          
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 7.050e-14
Identity = 47/57 (82.46%), Postives = 49/57 (85.96%), Query Frame = 0
Query:  160 VAPDLSQELEATQVTGTQPDEAVAAPASAQAVVETVTPGQDTEREQPVPASEALVAG 216
            V PDLSQEL ATQVTGTQPDEAVAAPASAQAVV+ VTP  +TE EQPVPA EALV G
Sbjct: 2002 VVPDLSQELAATQVTGTQPDEAVAAPASAQAVVKAVTPVTETEHEQPVPAREALVKG 2058          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KUR8_9PHAE4.570e-7172.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7R7_9PHAE2.240e-6564.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNB8_9PHAE8.950e-3751.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFH6_ECTSI6.290e-3266.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA48_9PHAE1.840e-2680.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTT9_ECTSI7.050e-1482.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:74771..75877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15154.1mRNA_C-linearis_contig76.15154.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 74395..75877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15154.1 ID=prot_C-linearis_contig76.15154.1|Name=mRNA_C-linearis_contig76.15154.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=242bp
MTKMQEYAIPVAEADSDDDGAAAVTPGQGTDPEQPIPASGERGTVGVGAR
EEECTAPATAATGEKGRQAPPATPAPAAAPQGVGCISSSGGGGGGGGGGS
GTAIDGAMSVSAAGAAGARGVQVVSSSNLNLLATICLLEENVIGGGDGAN
HDETVPIEEVAPDLSQELEATQVTGTQPDEAVAAPASAQAVVETVTPGQD
TEREQPVPASEALVAGDVAVQAAGEADAGEVMPTSSELGGV*
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