prot_C-linearis_contig74.15039.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: D8LD41_ECTSI (SDH3, succinate dehydrogenase subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD41_ECTSI) HSP 1 Score: 242 bits (617), Expect = 3.390e-79 Identity = 134/177 (75.71%), Postives = 146/177 (82.49%), Query Frame = 0
Query: 2 LSRAVQRTAVLPSMATMTSKGRPLAVAATAPASRRAFNSSSSSSSPETEMESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVGLAAI 178
L+RAVQRT +A +T KGRPL A A + SSSSS+ + E ESYTARQA+TGRPVSPHVTIYDFPPAALSSIANR TGVALV GLYGISGA+LVGCD LM+ALGSS VGPAVKLAVSFPLVYHY GAVRHTVWDYMPETLQT GVAKTSYALLG SGA+S+GLAA+
Sbjct: 5 LARAVQRTTTAAPLA-LTHKGRPLVAAV----GSHALSRSSSSSASDKEKESYTARQARTGRPVSPHVTIYDFPPAALSSIANRVTGVALVAGLYGISGATLVGCDAAGLMSALGSSGVGPAVKLAVSFPLVYHYLGAVRHTVWDYMPETLQTAGVAKTSYALLGVSGAVSLGLAAV 176
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A7S1XVJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVJ2_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.160e-42 Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 0
Query: 52 ESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVGLA 176
E Y+ARQ KTGRPVSPHVTIY FP A+SSI+ R TG L VGL GI +LVG D ALM+A+GSS++GP K AVS+ LVYH+FGA RH VWD PE L+ + V +TS ++GA+G IS GLA
Sbjct: 53 EKYSARQKKTGRPVSPHVTIYAFPAVAISSISVRVTGCILSVGLGGIGALALVGVDTPALMSAVGSSAIGPLAKFAVSYSLVYHFFGAARHYVWDQSPEMLENDQVYQTSLGIMGAAGVISAGLA 177
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A835YMP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP1_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.380e-41 Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 0
Query: 51 MESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISV 173
+ Y RQ KTGRPVSPHVT Y FP A+SSI NR TGV LV GLYGI +LVG D LM LG ++V P K+ V+FPL+YHY GA RHT+WD+ PET+ VA++SY L GA+G +++
Sbjct: 27 LSDYIERQNKTGRPVSPHVTAYRFPVVAISSITNRVTGVGLVGGLYGIGALALVGVDVQGLMAMLGETAVAPLAKMVVTFPLIYHYLGAARHTIWDFKPETVNNASVAQSSYILFGAAGGLTL 149
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A836CCH7_9STRA (Transmembrane subunit of succinate dehydrogenase/Fumarate reductase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH7_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.740e-37 Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 0
Query: 40 SSSSSSSPETEMESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVGLAAI 178
S++ ++S E SY Q + GRP+SPHVT Y FP AA+SSI NR TGVALV GLYGI SLVG D +M+ + S + VKL V+FPL+YHYF A RHT+WD+ PET++ + V K+S + A+G++S+ A +
Sbjct: 1 SAAQAASQRVESHSYDELQQRRGRPISPHVTNYRFPIAAISSITNRITGVALVGGLYGIGALSLVGVDAQHIMSVIHDSILAGPVKLVVTFPLIYHYFAAARHTIWDFYPETVENKSVEKSSLLIFAAAGSLSLAAACL 139
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A7S3MID7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MID7_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.070e-34 Identity = 68/125 (54.40%), Postives = 87/125 (69.60%), Query Frame = 0
Query: 53 SYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSV-GPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVGLA 176
SY+ QAK GRP+SPHV IY FPPAAL+SI NR TG L VG+ GI +L G D +++M+ +G SV G KL+V+FPLVYHY +RH WD PE L T+ V ++S+ L+G+S AISV LA
Sbjct: 30 SYSEEQAKKGRPISPHVEIYKFPPAALTSITNRVTGGLLSVGMTGIGVLALAGADVSSIMSNIGDISVVGQTAKLSVAFPLVYHYLAGIRHIAWDRNPELLHTDKVTQSSHVLIGSSVAISVVLA 154
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: W7TK90_9STRA (Succinate dehydrogenase cytochrome b subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK90_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.320e-33 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 0
Query: 52 ESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNALGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISV 173
E+YT RQA+TGRPVSPHVTIY FP AL+SI+ R TG L VGL GIS +L G D LM++LG+S VG K+ FPL++HY +RH WD P L +GVA+ SY LLG++ AIS+
Sbjct: 46 ETYTERQARTGRPVSPHVTIYKFPITALTSISTRVTGGVLTVGLTGISLLALGGADVPMLMSSLGNSMVGVPAKVLFGFPLIFHYGSGLRHFFWDNNPNFLNNKGVAEASYILLGSTVAISL 167
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A7S2HYL2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYL2_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.180e-32 Identity = 69/137 (50.36%), Postives = 86/137 (62.77%), Query Frame = 0
Query: 42 SSSSSPETEMESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTA--LMNALGSSS--VGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVG 174
S S+ E + ++Y R AKTGRPVSPH+TIY FP A+SSI NR TG AL G G+ LVG A LM + +S V + K AV+FP ++HYFGA+RH WDYMPE L V K S+AL G+S +SVG
Sbjct: 47 SKESAEEYKKQNYKERMAKTGRPVSPHLTIYHFPVGAMSSITNRVTGCALTFGAAGVGAIELVGGSGAAMGLMQDIAASGGLVAASAKFAVAFPCIFHYFGAIRHIAWDYMPEYLNNPDVEKASWALFGSSLVVSVG 183
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A7S1YU13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YU13_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.420e-32 Identity = 68/131 (51.91%), Postives = 82/131 (62.60%), Query Frame = 0
Query: 48 ETEMESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTA--LMNALGSSS--VGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVG 174
E + ++Y+ R A+TGRPVSPH+TIY FP ALSSI NR TGVAL G G+ L+G A L+ +GSS VG K AV+FP VYHY GA+RH WD PE L+ V K S AL G+S IS G
Sbjct: 3 EYKKQNYSERMARTGRPVSPHLTIYSFPVGALSSITNRVTGVALTFGAAGVGAIELLGGSGAAAGLLQDIGSSGALVGCTAKFAVAFPCVYHYIGAIRHLAWDNRPELLENTDVEKASIALFGSSLLISAG 133
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A1Z5JV10_FISSO (Succinate dehydrogenase (Ubiquinone) cytochrome b560 subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV10_FISSO) HSP 1 Score: 122 bits (305), Expect = 6.740e-32 Identity = 67/123 (54.47%), Postives = 80/123 (65.04%), Query Frame = 0
Query: 54 YTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTAL--MNALGSSS--VGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAIS 172
Y+ R +TGRPVSPHVT+Y FP ALSSI NR TG AL VG G+ LVG T+L M +GS V A K VSFP+VYHYF A+RH +WD PE L+ + V ++SY L GAS AIS
Sbjct: 47 YSKRMKETGRPVSPHVTVYAFPTVALSSITNRVTGCALSVGCAGLGLVELVGGTGTSLSLMQTIGSQGFVVAAAAKFTVSFPIVYHYFAAIRHFMWDAKPEMLENQAVQQSSYYLFGASAAIS 169
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Match: A0A8J6C331_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C331_DIALT) HSP 1 Score: 121 bits (303), Expect = 7.430e-32 Identity = 66/129 (51.16%), Postives = 83/129 (64.34%), Query Frame = 0
Query: 52 ESYTARQAKTGRPVSPHVTIYDFPPAALSSIANRATGVALVVGLYGISGASLVGCDPTALMNA--LGSSSVGPAVKLAVSFPLVYHYFGAVRHTVWDYMPETLQTEGVAKTSYALLGASGAISVGLAAI 178
ESYT R KTGRPVSPHVTIY FP AALSSI R TGV L VG I ASL G D AL+++ L + ++ P K+A+++PL YH+ A+RH WD+ L + V TS AL +G +S+G AAI
Sbjct: 26 ESYTERMDKTGRPVSPHVTIYKFPAAALSSITTRITGVMLTVGTSAIGAASLAGADVPALVSSCQLAAPALVPVAKVAITYPLTYHWLSAMRHAYWDWTASGLHIKTVRTTSLALFAGAGLLSLGFAAI 154 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig74.15039.1 ID=prot_C-linearis_contig74.15039.1|Name=mRNA_C-linearis_contig74.15039.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=179bpback to top |