prot_C-linearis_contig74.15030.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15030.1
Unique Nameprot_C-linearis_contig74.15030.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length231
Homology
[Close]
BLAST of mRNA_C-linearis_contig74.15030.1 vs. uniprot
Match: A0A6H5JT31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT31_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 5.420e-38
Identity = 77/142 (54.23%), Postives = 95/142 (66.90%), Query Frame = 0 
Query:    4 KGDGACLMNGLVAGALNMKCSEEWSGDGPALALRAAAVRTALANFQKFMSPDGYLEEYCSGQLFDSAEHDRVVGLTGGYQFPMDMSVEMARLYYLCAVRNITGPYSTCQGACLPWVAEVLGLKVRVVHPGITVADVGATWKK 145
            +G GAC    L +GALN +CS      G ALALR  A+R AL   ++F+S DGYL EY SG LFD+ EHD V+ L G   +PM+MS ++ARLYYLCA+R+  GP+   Q A LPW AEVLGLKVRV HP  +V+ VG  W K
Sbjct:  101 EGKGACFWIALASGALNTRCST----GGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRV-WPMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNK 237
[Close]
BLAST of mRNA_C-linearis_contig74.15030.1 vs. uniprot
Match: D7G0G8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G8_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.870e-35
Identity = 73/141 (51.77%), Postives = 92/141 (65.25%), Query Frame = 0 
Query:    5 GDGACLMNGLVAGALNMKCSEEWSGDGPALALRAAAVRTALANFQKFMSPDGYLEEYCSGQLFDSAEHDRVVGLTGGYQFPMDMSVEMARLYYLCAVRNITGPYSTCQGACLPWVAEVLGLKVRVVHPGITVADVGATWKK 145
            G GAC+   L +GAL+ +CS      G ALALR AA+R AL    +F+S DGYL EY S  LFD  EHD V+ L G  ++  ++S ++AR+YYLCAVRN  GP+   Q A +PW AEVLGLKVRV HP  +V+ VG  W K
Sbjct:   94 GLGACVWIALASGALSERCST----GGAALALRTAAMRMALLKSPEFLSRDGYLAEYRSPDLFDLKEHDMVLKLAGR-EWTENISPDVARMYYLCAVRNNCGPFKYSQQAVIPWAAEVLGLKVRVFHPAASVSPVGGKWNK 229
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT31_9PHAE5.420e-3854.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G8_ECTSI1.870e-3551.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:592214..593028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15030.1mRNA_C-linearis_contig74.15030.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 591230..593049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15030.1 ID=prot_C-linearis_contig74.15030.1|Name=mRNA_C-linearis_contig74.15030.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
MKTKGDGACLMNGLVAGALNMKCSEEWSGDGPALALRAAAVRTALANFQK
FMSPDGYLEEYCSGQLFDSAEHDRVVGLTGGYQFPMDMSVEMARLYYLCA
VRNITGPYSTCQGACLPWVAEVLGLKVRVVHPGITVADVGATWKKAILVG
KKATAMLETAIATARETCRVIFLVVSQWISLWSTSSFWKLNRVVREVRLW
NLCRTLDLTNAEFEDFGVFLRLRGCRKRTS*
back to top