prot_C-linearis_contig74.15013.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15013.1
Unique Nameprot_C-linearis_contig74.15013.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length478
Homology
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A6H5JZ57_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ57_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 4.440e-43
Identity = 235/391 (60.10%), Postives = 256/391 (65.47%), Query Frame = 0
Query:   63 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLM--PSLQFDGDAAGAGA--GKGPDMSLPLSDHPMSGPVPSLAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------GNXXXXXXXXXNLVEAAGAGGHGSVPVSSAGGGPGGRMITPGGVGTPFLGSGGLGVLASLTGGSRDRDGSSSSQPG-GGRTLHPKSMPTFVSVSGPGSGGAGGAAGISTGPSHLQSSGYGGSXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXPSVGAPRGFDYADMMAHAAANAANVRARSAQQ 433
            KKMRIEELGRSVVFLTRENQELREQNEIFRQMVA+EV+ D      +K++AENAALRMALYE    +K  G+ S  +  P    DG AAGAG+  GK P   + LS+HPMSGPVPSLAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXX L++  GA         S GG    RMI P G+G PF+  GGLGVLASLTGG RD  G+ +SQP  GGR+L+PKSM TFVSV    SG AG AAG ST P H QSS   G                   D               G P G DYA+MMA A+ANAA VRARS QQ
Sbjct:   23 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVASEVSMDGKIGFNTKFRAENAALRMALYEA---DKTHGSSSNRLHQPKQDMDGGAAGAGSRLGKSPT-GMSLSEHPMSGPVPSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNLPRHLSSTDGKVNGGSXXXXXXXXXXRLLDGPGAAXXXXXXXVSGGGN---RMIAPAGMGAPFMSGGGLGVLASLTGGRRD--GTGTSQPSSGGRSLNPKSMSTFVSVP---SGVAGAAAGRSTVPPHPQSSSSYGPPEYRT-------------DAAGAGGRKLDREGEGGGPGGSDYAEMMARASANAAMVRARSIQQ 388          
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: D8LD64_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD64_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 6.390e-41
Identity = 223/381 (58.53%), Postives = 245/381 (64.30%), Query Frame = 0
Query:   63 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLM--PSLQFDGDAAGAGA--GKGPDMSLPLSDHPMSGPVPSLAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GNXXXXXXXXXNLVEAAGAG------GHGSVPVSSAGG--GPGGRMITPGGVGTPFLGSGGLGVLASLTGGSRDRDGSSSSQPG-GGRTLHPKSMPTFVSVSGPGSGGAGGAAGISTGPSHLQSSGYGGSXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXPSVGAPRGFDYADMMAHAAANAA 424
            KKMRIEELGRSVVFLTRENQELREQNEIFRQMVA+EV+PD      +K++AENAALRMALYE    +K  G+ S  +  P    +G AAGAG+  GK P   + LS+HPMSGPVPSLAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  N     G G      G G+   + +GG  G G RMI P G+G PF+  GGLGVLASLTGG RD  G+ +SQP  GGR+LHPKSM TFVSV G   G  G AAG ST P H QSS   G                   +               G P G DYA MMA A+ANAA
Sbjct:   73 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVASEVSPDGKIGFNTKFRAENAALRMALYEA---DKTHGSSSNRLHQPKQDMEGGAAGAGSRLGKSPT-GMSLSEHPMSGPVPSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQHLSSTDGKVNGGSINGSSRVGGGTCSLLDGPGAAGAAGSGGVSGGGNRMIAPAGIGAPFMSGGGLGVLASLTGGGRD--GTGTSQPSSGGRSLHPKSMSTFVSVPG---GAVGAAAGRSTAPPHPQSSSSYGPPGYRTDAAGAGGRKLDREERGEG-----------GGPGGLDYA-MMARASANAA 432          
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A7R9UFM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFM4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.220e-7
Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   63 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVRE 128
            KK+RIEEL RSVVFL+REN ELREQN++ R M+  +VA + S   + + Q EN AL++ALYE+V++
Sbjct:   83 KKLRIEELQRSVVFLSRENCELREQNDVLRSMLTADVASENS-ALIDRCQQENTALKVALYESVQK 147          
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A7S2AR28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AR28_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.440e-6
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   63 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVR 127
            KK+RIEEL RSV FLTRE  EL EQN + R+M+A+E+  D ++ A+ +  AEN AL++ALYE ++
Sbjct:  130 KKIRIEELQRSVGFLTREKAELTEQNNLLRRMLASEIPRDNAS-AIDRITAENTALKLALYEHIQ 193          
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A5A8E0M4_CAFRO (BZIP domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0M4_CAFRO)

HSP 1 Score: 56.6 bits (135), Expect = 6.570e-6
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 0
Query:   63 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKY-QAENAALRMALYETVR---------EEKPAGACSYLMPSLQFDGDAAGA-----GAGKGPDMSLPLSD---HPMSGPVP 173
            KK R++EL RSVVFLTREN ELREQNEI R++++ E   D+S   L ++ ++EN AL++A+Y+T +         E+    A + L  ++  D  A G      GA   P + LP SD   +P +G  P
Sbjct:   32 KKARLDELQRSVVFLTRENSELREQNEILRRVLSRET--DSSVMELLEHLRSENQALKVAVYDTAQTLAMTTGALEKGMPHAATALAAAVAEDEAARGEPAPAPGAAGLPFVQLPGSDTTSNPATGGAP 158          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JZ57_9PHAE4.440e-4360.10BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LD64_ECTSI6.390e-4158.53BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7R9UFM4_9STRA2.220e-756.06Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2AR28_9STRA2.440e-653.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A5A8E0M4_CAFRO6.570e-639.53BZIP domain-containing protein n=2 Tax=Cafeteria r... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableCOILSCoilCoilcoord: 67..94
NoneNo IPR availableGENE3D1.20.5.170coord: 44..97
e-value: 6.8E-9
score: 37.6
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 44..95
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 40..104
e-value: 6.1E-6
score: 35.7
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 44..96
e-value: 7.2E-10
score: 38.8
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 42..93
score: 10.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:460347..468158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15013.1mRNA_C-linearis_contig74.15013.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 460347..468307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15013.1 ID=prot_C-linearis_contig74.15013.1|Name=mRNA_C-linearis_contig74.15013.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=478bp
MTTRHGLPIAMHADDATSSGGESDERSNGGDHGGGGSGGDMDNKRRRRLE
LNRKAAKESRRRKKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVA
PDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLMPSLQFDGDAAG
AGAGKGPDMSLPLSDHPMSGPVPSLAAAVAAVGPPPPASSSPTQSMMTSL
PLIPNQSGGDQQSSASSPPTSMMMRSSLQQHLSSPESKNNGGGGSSDDNG
NGNGSSRSSGNLVEAAGAGGHGSVPVSSAGGGPGGRMITPGGVGTPFLGS
GGLGVLASLTGGSRDRDGSSSSQPGGGRTLHPKSMPTFVSVSGPGSGGAG
GAAGISTGPSHLQSSGYGGSQQGGYGGTGMGQNSGRKLDRGGGGVTGGGG
GPSVGAPRGFDYADMMAHAAANAANVRARSAQQQHSDNGGGGGGGGGASG
GSSAGRSGSRRGGGWPSSWPAGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP