mRNA_C-linearis_contig74.15013.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig74.15013.1
Unique NamemRNA_C-linearis_contig74.15013.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A6H5JZ57_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ57_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.130e-42
Identity = 235/391 (60.10%), Postives = 256/391 (65.47%), Query Frame = 3 
Query:  336 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLM--PSLQFDGDAAGAGA--GKGPDMSLPLSDHPMSGPVPSLAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------GNXXXXXXXXXNLVEAAGAGGHGSVPVSSAGGGPGGRMITPGGVGTPFLGSGGLGVLASLTGGSRDRDGSSSSQPG-GGRTLHPKSMPTFVSVSGPGSGGAGGAAGISTGPSHLQSSGYGGSXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXPSVGAPRGFDYADMMAHAAANAANVRARSAQQ 1448
            KKMRIEELGRSVVFLTRENQELREQNEIFRQMVA+EV+ D      +K++AENAALRMALYE    +K  G+ S  +  P    DG AAGAG+  GK P   + LS+HPMSGPVPSLAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXX L++  GA         S GG    RMI P G+G PF+  GGLGVLASLTGG RD  G+ +SQP  GGR+L+PKSM TFVSV    SG AG AAG ST P H QSS   G                   D               G P G DYA+MMA A+ANAA VRARS QQ
Sbjct:   23 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVASEVSMDGKIGFNTKFRAENAALRMALYEA---DKTHGSSSNRLHQPKQDMDGGAAGAGSRLGKSPT-GMSLSEHPMSGPVPSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNLPRHLSSTDGKVNGGSXXXXXXXXXXRLLDGPGAAXXXXXXXVSGGGN---RMIAPAGMGAPFMSGGGLGVLASLTGGRRD--GTGTSQPSSGGRSLNPKSMSTFVSVP---SGVAGAAAGRSTVPPHPQSSSSYGPPEYRT-------------DAAGAGGRKLDREGEGGGPGGSDYAEMMARASANAAMVRARSIQQ 388
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BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: D8LD64_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD64_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.560e-40
Identity = 223/381 (58.53%), Postives = 245/381 (64.30%), Query Frame = 3 
Query:  336 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLM--PSLQFDGDAAGAGA--GKGPDMSLPLSDHPMSGPVPSLAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GNXXXXXXXXXNLVEAAGAG------GHGSVPVSSAGG--GPGGRMITPGGVGTPFLGSGGLGVLASLTGGSRDRDGSSSSQPG-GGRTLHPKSMPTFVSVSGPGSGGAGGAAGISTGPSHLQSSGYGGSXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXPSVGAPRGFDYADMMAHAAANAA 1421
            KKMRIEELGRSVVFLTRENQELREQNEIFRQMVA+EV+PD      +K++AENAALRMALYE    +K  G+ S  +  P    +G AAGAG+  GK P   + LS+HPMSGPVPSLAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  N     G G      G G+   + +GG  G G RMI P G+G PF+  GGLGVLASLTGG RD  G+ +SQP  GGR+LHPKSM TFVSV G   G  G AAG ST P H QSS   G                   +               G P G DYA MMA A+ANAA
Sbjct:   73 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVASEVSPDGKIGFNTKFRAENAALRMALYEA---DKTHGSSSNRLHQPKQDMEGGAAGAGSRLGKSPT-GMSLSEHPMSGPVPSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQHLSSTDGKVNGGSINGSSRVGGGTCSLLDGPGAAGAAGSGGVSGGGNRMIAPAGIGAPFMSGGGLGVLASLTGGGRD--GTGTSQPSSGGRSLHPKSMSTFVSVPG---GAVGAAAGRSTAPPHPQSSSSYGPPGYRTDAAGAGGRKLDREERGEG-----------GGPGGLDYA-MMARASANAA 432
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BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A7R9UFM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFM4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.630e-7
Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 3 
Query:  336 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVRE 533
            KK+RIEEL RSVVFL+REN ELREQN++ R M+  +VA + S   + + Q EN AL++ALYE+V++
Sbjct:   83 KKLRIEELQRSVVFLSRENCELREQNDVLRSMLTADVASENS-ALIDRCQQENTALKVALYESVQK 147
[Close]
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A7S2AR28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AR28_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.840e-6
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 3 
Query:  336 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKYQAENAALRMALYETVR 530
            KK+RIEEL RSV FLTRE  EL EQN + R+M+A+E+  D ++ A+ +  AEN AL++ALYE ++
Sbjct:  130 KKIRIEELQRSVGFLTREKAELTEQNNLLRRMLASEIPRDNAS-AIDRITAENTALKLALYEHIQ 193
[Close]
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Match: A0A5A8E0M4_CAFRO (BZIP domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0M4_CAFRO)

HSP 1 Score: 56.6 bits (135), Expect = 7.410e-6
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 3 
Query:  336 KKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVAPDTSNTALSKY-QAENAALRMALYETVR---------EEKPAGACSYLMPSLQFDGDAAGA-----GAGKGPDMSLPLSD---HPMSGPVP 668
            KK R++EL RSVVFLTREN ELREQNEI R++++ E   D+S   L ++ ++EN AL++A+Y+T +         E+    A + L  ++  D  A G      GA   P + LP SD   +P +G  P
Sbjct:   32 KKARLDELQRSVVFLTRENSELREQNEILRRVLSRET--DSSVMELLEHLRSENQALKVAVYDTAQTLAMTTGALEKGMPHAATALAAAVAEDEAARGEPAPAPGAAGLPFVQLPGSDTTSNPATGGAP 158
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JZ57_9PHAE1.130e-4260.10BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LD64_ECTSI1.560e-4058.53BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7R9UFM4_9STRA2.630e-756.06Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2AR28_9STRA2.840e-653.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A5A8E0M4_CAFRO7.410e-639.53BZIP domain-containing protein n=2 Tax=Cafeteria r... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:460347..468307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBasic leucine zipper transcription factor
Ec32 orthologEc-11_000630.1
Exons5
Model size1583
Cds size1434
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15013.1prot_C-linearis_contig74.15013.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig74 460347..468158 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930412.9053664-CDS-C-linearis_contig74:460346..4613481622930412.9053664-CDS-C-linearis_contig74:460346..461348Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 460347..461348 -
1690881056.827678-CDS-C-linearis_contig74:460346..4613481690881056.827678-CDS-C-linearis_contig74:460346..461348Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 460347..461348 -
1622930412.9232335-CDS-C-linearis_contig74:461840..4619871622930412.9232335-CDS-C-linearis_contig74:461840..461987Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 461841..461987 -
1690881056.845451-CDS-C-linearis_contig74:461840..4619871690881056.845451-CDS-C-linearis_contig74:461840..461987Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 461841..461987 -
1622930412.9386256-CDS-C-linearis_contig74:462782..4629051622930412.9386256-CDS-C-linearis_contig74:462782..462905Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 462783..462905 -
1690881056.857257-CDS-C-linearis_contig74:462782..4629051690881056.857257-CDS-C-linearis_contig74:462782..462905Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 462783..462905 -
1622930412.9510584-CDS-C-linearis_contig74:466808..4669421622930412.9510584-CDS-C-linearis_contig74:466808..466942Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 466809..466942 -
1690881056.867203-CDS-C-linearis_contig74:466808..4669421690881056.867203-CDS-C-linearis_contig74:466808..466942Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 466809..466942 -
1622930412.9640136-CDS-C-linearis_contig74:468130..4681581622930412.9640136-CDS-C-linearis_contig74:468130..468158Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 468131..468158 -
1690881056.877531-CDS-C-linearis_contig74:468130..4681581690881056.877531-CDS-C-linearis_contig74:468130..468158Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 468131..468158 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930412.977261-UTR-C-linearis_contig74:468158..4683071622930412.977261-UTR-C-linearis_contig74:468158..468307Chordaria linearis ClinC8C monoicousUTRC-linearis_contig74 468159..468307 -
1690881056.8874376-UTR-C-linearis_contig74:468158..4683071690881056.8874376-UTR-C-linearis_contig74:468158..468307Chordaria linearis ClinC8C monoicousUTRC-linearis_contig74 468159..468307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig74.15013.1

>prot_C-linearis_contig74.15013.1 ID=prot_C-linearis_contig74.15013.1|Name=mRNA_C-linearis_contig74.15013.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=478bp
MTTRHGLPIAMHADDATSSGGESDERSNGGDHGGGGSGGDMDNKRRRRLE
LNRKAAKESRRRKKMRIEELGRSVVFLTRENQELREQNEIFRQMVANEVA
PDTSNTALSKYQAENAALRMALYETVREEKPAGACSYLMPSLQFDGDAAG
AGAGKGPDMSLPLSDHPMSGPVPSLAAAVAAVGPPPPASSSPTQSMMTSL
PLIPNQSGGDQQSSASSPPTSMMMRSSLQQHLSSPESKNNGGGGSSDDNG
NGNGSSRSSGNLVEAAGAGGHGSVPVSSAGGGPGGRMITPGGVGTPFLGS
GGLGVLASLTGGSRDRDGSSSSQPGGGRTLHPKSMPTFVSVSGPGSGGAG
GAAGISTGPSHLQSSGYGGSQQGGYGGTGMGQNSGRKLDRGGGGVTGGGG
GPSVGAPRGFDYADMMAHAAANAANVRARSAQQQHSDNGGGGGGGGGASG
GSSAGRSGSRRGGGWPSSWPAGGGGGGG
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mRNA from alignment at C-linearis_contig74:460347..468307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig74.15013.1 ID=mRNA_C-linearis_contig74.15013.1|Name=mRNA_C-linearis_contig74.15013.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7961bp|location=Sequence derived from alignment at C-linearis_contig74:460347..468307- (Chordaria linearis ClinC8C monoicous)
GGACAAGAGCAATCTCCCACGCAGGAAGGAGTTCCGGTTAACCCACTCTG
TTCGATTTGGGGGCACAGATCAGGGCCGGCAGCGCACATCTACAGGGACC
GTGTGGTTCGTGGGCCGCGCGGAAAACCGGAGCGAAAGGCCCTTTACAGA
TGACCACCCGCCACGGGCTACCAATCGGTGAGCGGTGAGAGCGGGTTTAG
GGCGTCTCTCTCTCCCAGCCCGTCCAAAACGGCGGGGTACAGACTCCTCA
TTTGAGTAGCAGCGGAGCTTCAGGGTTCTAGTATTAGCATCACGAAAGCT
CTGGTATGGCTTCCGATGACGTTCGGCCGGAATTTGCATCCCAGTCGCGG
CGCAACCGGCACGCCACCACGCTGCTACCCTTGGCTCACGGGCTTGGCGT
GTTCCCTGCTCCATCGGGTGGGGCGCGAGGTGCTGCCTATCAGCAGCAGA
TCGCTTTCCCCCGGCATCGTCAAGCGCCTAAAGGTTTGCTCACGTTCACC
GCCGAATTAAATATTCCTAGGTCCACATCCTCGGAAGTGTAAGTGTTGTG
GGGGAGGCCGGTTCTGGTCCTTTTTTCCCTCTCGTGGAGGAAGTGAAAAA
TAGCCCGCCGCCGCCGCCCAACATCCTGTGTGTGAGAGTCAAGTCTGTTC
GCAGTTTGCAGAGAGAGAGCGTGGAAAAAAACAGAAAAAACCGTCTTTGA
ATCGTAGATGGGCAACCGATGCTGGTCCTGTTTCCCAGTCACGCTCGATT
CGGCTCCTTCAGTAAGCAGAGGTTTGGCATGGAGGAGTTGCTTTTGCACG
GACTGCCTTGGCATCCATTTGCTTGCCTCTCTGTGCGTGGTTGAATTGTG
AGGCTGCGGACAGCGGCGGCTTAGACTACTTGTAGTCACCGGGGGGCAGC
AAGACAGCAAAGGGACGGCTACCCCCTTATTCGACACCAGGCCGTTCTGA
GAGAGACACAGAGAGAGAGAGCGCACAGCACTTTCAAATATACGCTTTCT
TTTTGAGAGCGGACACACAGCGGTCGGACGGTCGGACCGCGCCTTCGTCT
CCATCACCGTCGTGGTTTGCACATCAGAAGTCAAAAACTGAAATAAAGTA
GCAGTAACAGCATACAAGTTCGAATGTACAGAGTATGTAAAGAAGGCCGG
CCCAGAAGGCGCTCGTGTCATGCAGAACAGTTTTTGTGTCTCGTTTTTTC
CCCCCATCAACTTTGGCTTGCGAGTATTTTGGTGACATCCTCCAAACTTT
TAAACTGCTGTTGCTCTCCGCGCGCGACAACAACACGTTTCCTCACTGGA
GCTGTCCCCTCCCCTCCCATGCCAACCTTAACCTCAACCTTTGCCCTGCT
TTCTGTCTCTGTCAGCGATGCATGCCGACGATGCCACCTCTTCAGGGGGA
GAGAGCGATGAGAGAAGCAACGGAGGGGACCACGGGGGCGGTGGCAGCGG
CGGCGACATGGACAACAAGAGGAGGAGGAGGTTGGAGCTCAACAGAAAGG
TGTGTCTAGTGCTTCGTGTTTTTGGTTGATGTTGCGTGGTGTGGTGTGGT
GTGGTGTGGGGTGATGTATTGCATTGCGTGCGCAATTTGCAATTTGAGGC
TTACTCCCGGCGTGTCCCTTGTCGTGGAGATGCTCTTGTCGCTTTTTCGG
TCTATCGATGACTGTTCGATATCGATATCAAGAAGTCCAACTACCTGAGC
TGTTGCACGACGAAAGACCGCCGTGGTACATACAGCACTGCAGGAGGTAG
GTGGAGACTTCCCCTCCTGTGTGACCCCGGATGGTAGCCTAGCTAGTTGT
AGTGAAGAGGAGGAGGCAGGCTACGAAAAAAACACTAATGGGCGAGAAGA
AGAAAAATAAATAAATACTTTTAAGTAATACAGACGTCTTCCCAGTCCGC
CACCCTCTACAGACTTTACTTTTGTCAACTATCAATATGTTGGGATCTGT
TTGGTGCGCCGTCTCGCCGGTCGGTGTTCCTGTTGTCTGTCTCCGTGCGA
GTATATACGATTCCGGGATTCCAGGACGGAATTGTTTCTTGGTCACTTTG
CTTTTTAACCCGTATGTACCGGCATGGCGGCATTGGTCTAGTGCAGGAGA
GACATTTCGAACGGCAGAAATTGCCTGCGTACATACAAGTATCATGTTTG
CGTTCTCTCTTGCCCTCGCGCAACGCGGATTGGCTGCCGATTGCGCCTAG
TTTTTTCGGAATTTCGTCTGTGCATTATTTTTTGCCTCTTTTACGTGGCG
GCACTCCACTCCACTGCTGGGCTAGTACTAGTAGCTGCTGCTGCTGCTGC
TGCTGCTGCTGGTTTTGAGTGTTCTCTTGAGGGTATGCAGCTGGGCCGAC
TCGCATGCATGTATTTTATTTTCAGCGTACGGGTGCGAGCTGCGGTTCTG
CTGGCCGCGTGGTTAGAAGTCGACCTTTTTTTTTTCGCGAAAAAAATGCG
ACTCTTTCGCTCTCTTCGTCTGTACCAGTAGTGTCCCTCTCGTGTGCCCC
CCGCGTCCAGCGGAACAGCCGTACAAGTACTGAGTTGAGTTCTGTAGCAT
GTGTGTCGCTTCCCAGGTGTGCAGCAAAAGTCGCTGAAAGCAGGCAGCAG
CGGGCGGATATGAGATACGATGCACATGATTATGATGATTATGATTATGA
TTATGATTATGATCACTTCAATTTTTGACCGTTGGACTTCTTTCTGCACC
CCTAGATCCACACAAATACAGCAGTCTAGACGTCAGCGGAATAATAGATC
GACGGCACTTGCCTCGACCTTCTGTTGCCTTTGTTCGGAAGGCAGACGGG
GCTCGAAATCGTAGCAGCACAGCAGTGGCAGATAACTCCCCAACTCGCCG
GCAGTGGCACGTTTGCGGCGACAGAGGTATATCATGGAGTACATACATAG
ATATATCCATGTGTTTTTTTGTCATGCATGTGATTCCGGTGAGGCCGCTT
GGACTGGTGTGTATCATGGCTGATGTTGCGTGTTGGTCTAGTCTTAACTA
GCCTGGACACTGCGTTCTATCCCACGTCACTATTGTCTATGGTCCGTCAT
CTAGACTTGATTCGGTCGATTCCAAAGCCACGGGGGATCATGGAGTCGCG
TCACGTCGCTATTATTATTAATCTTAATAGAGCCTCCCTTGTTTTCTTGC
TGTTGAAGTTTAGTGGGCTGTGGCCCTCGCCCTGAGATAAAAAGCACGCA
CATGGTCTAAATACCGTGATCATGCGTGAGATGGCACCCATCGAAGAGAT
GGCACCCATCGGAGAGATGGCACCAGGGTTCGAGAAAAAAAACAAGAAAT
AACCATTTAATTGTATTTTCGCACCCCCATCGGAGAGATGGCACCGGGTG
CGATCTCAACGATGAAAATCCAAGAGTGAGTGCTACCGCACCGGGCCTAT
GTGGTGACACCAGGGGCCCACTCCTCTCGCGTACCACTATTAGACTACAT
GTCAATCTGTTGTTTCGATGCTGTTCTCGCGTGGAAATGAGTCAAGTTAT
TCTCATTTGATCGGCATGGAAATTGTGAAATTGTACGCTCTCAACCAAGC
CTACAATACACAGGCCGTTTGTTGCCCAGTAAGGCCGTTTGTATTTACCG
GTTCGGCATCGCACCCATCGGAGAGATGGCACCGGGGGTGCCTTGCAAAA
CATTGGAATATAATGCTTTAATTGCATCATTGCACCGGTATGCGTGAGAT
GGCACCCATCGGTGAGATGGCACCAGGGTGCGCAAAAAAATACAAGAAAT
AAGTATTTAAAACCCTGATCGCACCCGGTGCCATCTCTCGCATGATTACG
GTAGCTTGCCTGAAAGCTTGCGATTAAATCAGCACTGCACCTACCCTAAA
TACACCTGGTCGCAGTTATCTAGAAGTGAGGCTTCCATCTGATACCCCTG
GGTCAGTTTCCTTTCCAGAAGGTGAAACAACTATTTACTCTTGTTATTGT
CTTATTATAGTGTGAACATCAAGGCGGGTAACAGACACAAATCAAAAGGC
CTTTCCTCCCGTCTCGCTTGCTGTCCGTGAACCCTGCCCTGCCCGTCCCC
TTTTCCTTATCTCGTTTTCGGCGACTCTCGCTGCTTTTTTGTTCGTGTAT
GTTGATGTTGATGCCGTCGGTCGATATTTATGTGCTCTCTTCATGAGTGC
GGCATGATACACACCAAAGCAGCAGTGTGGCACAAAAAAAATGACCCCCC
GAACTGGCAAAGGGGATGCTTCTCGTACAGCAGTATGCCTGTAGCGTTGT
GGGATTGGGCGATGTTTTTGTGGTAAGTGACTGCTGTGTCACTGTCACTA
ACTTTGCCAAAGACAGCGCAGCAATTCTTTTATTTATCGGACAGCATAGT
GGAAAGCGCTTAGTTCGTGTGTACACTTGAGGGAGAGACGGCTGAAACTC
TCTCCCCCTAAAAATTACCAGGCAAGCACCGCAGAAGGTGGGTGGGGGCT
TCAGACAGAGGAACCTTCTGTGTGACCACGGTTCAGATGTTCTGGCAAGA
TGCCCCGCGTGGCAAGGCGCCCCTGCGAACTCTGGAAATAAATGTGAAGG
CGAAAACAAATATATATATTTACTTCGAAGTATATATATACTTCGTACAG
TATATGCTTGAAGTATATATATATTGGATTGATTGATTCTGTAAGCTTCT
GCGGCGCACGAGCTCAGTGCACTAAGTCCCAATCATATGGCGAGGTTGTC
AATGTGTGACGAATTTTAGGTTGCGGCGCCGGACTAGACCAGAAGAGCAC
GGTGACATGTTGGGGGATTATGTAGTAATGTTGGTGACAATTCCGTGTAA
TTGGACAGCGCTACGGCTCCCGAGTTTGGTTGCGCTGCCGTGGATGTGGG
GATGCGTGTGAGTGAACGCTTAGATGAGCCGTGTAAAGCTGCCCTCCGAA
TGCCGTCTTAAAAGCGAATTAATCGTTTTTTTTTCACACGTTGGTCGAGA
TGTAACACGAAAAAGATACAAAGCGCCAGCCTCACCAGCAAAAACTCGAG
TGCAACCAATCAAAGCGGGCTTTTTCTATGTGAAGGCGATGAGACGTTTC
TCTCGAAGGTGTAGACATAAACACACCATGCACCATACCATACCCATGCC
TACGTCTTTCCCTGGCGGTCCTTCACCCCGAACGATTGCGGCATGCTGGC
GGGCCCTCTCTCCCTCGAGCACCAAACAGCGCTTCAAGCATTATTCCAGC
ATTACAGCAGTAGTGCAGCCTTAAAACCGCTGTCTTCGGAGAAGAGCACG
AGGTTGTGCGCTGCCCAGCGTGCGCGAGCGCGATCGGCATTGTGGGGGAG
ATAATGCCCTAGCGGTGGTCATTTTTGCGAAACTAAACTCTCGTGTCCTC
TGAACCACGTACGTTCCCTGTGTGTGTTTTGTTGTTGCCTCATTCCATTC
AGGCGGCAAAGGAGTCTAGGAGGAGAAAAAAGATGCGCATCGAGGAGCTG
GGGCGAAGCGTGGTGTTCTTGACCAGAGAAAACCAAGAGCTGCGAGAGCA
GAACGAGATTTTCCGGCAAATGGTGGTGAGGCAGCGCCAGCGCCAGCGCC
TTGAGTTAGTTGTTCATGAATCCAATTCAGCGGAGATTTGGTTGGTGACG
AGACGACGTAAATAAAATGCATGTGCGTAATACAACGCGGCCCTAGTGTT
AATATAACGCGAACGGAAGCAGAGCTACATGCACAAGACGCACCAGGAAA
GAATGGAATACCGCGTAGAGCAGTAGACCATGTTGCTTTTGTCAGTCGTT
TGAATAGCTTGCTTTATTGCTTGGCCATATTTTGCTGGCGGTGAGACAGC
TAGCTTTTCGCTGGTAGATCGTTGTTTCTAATCGCGGTTTAGGAGGCGTT
TCACGCGGCACCTCTTAGATGCCCTGAAATTTCAGCTGCGTCCGTTCGCA
GCGTTTATTTCGAGTGAAGAACCTGACGTGCTGAAAGCGAAGCAGTTTCT
CCAAGCAACAGTTTTCGAAGTAGAACTGAAAGCGACAAAAAATCTCCACG
CAACAGAGTTTTGCGAATAGAACATGTGCAAGACAAAGCATCTAGAAATC
GTATGGAGTGATGATTATTAGGCCGGGCTGAATAGCTCGGTCGTGTTTTG
TACCCGATGTGGAAATGGGACCGACGGCCGTTGATTCGCCTTGTGATGCG
GCGCACCGTGTTGAAACCTCTACCCGTGCGATCACGATACCGCTGACTCA
GAGATGAGATGACCAACATGCCGTACTGACCTAAATCTAGTTCTGACACG
ATTACCATTGTGCTTATGCGCGTGCCATGTGTTGCTATCTGTGTTGGTTT
TGTCTGTGTCCAAACCGTAGGCCAACGAGGTGGCGCCAGACACCAGCAAC
ACTGCTCTCAGCAAGTACCAGGCAGAAAACGCGGCGCTTCGGATGGCGCT
GTACGAGACGGTGAGAGAAGAGAAGCCTGCTGGTGCATGCAGCTATTTAA
TGCCATCTTTGCAGTTTGTGAGCGTGATGTAGTCATTGGTTGTCTACCCA
GTGGAACAAACGGAAAAAGTTCACGTTTTTCTTGTTCTTTTGTGCCGTGT
CTTGTCTATACCTTATTCTGTCCCTCAGCTCGGAACACCCCAGCAAGCTT
TTCCTTCCCTCAGTCGCAGTGTTTTATGACTGAATGCATAAATCAGCGGT
GTTTCGCTTGAGCGGCGTGTCCCCCCCCCTCCCACTTTCACGCTAATTTG
CGTAGGTAGCCTACACTACACTACACTACACTACACTACACTATATCATG
CTTACACGATAGTATACTATGCTTATACTACACGATACTGTAGTGTACCC
ACGTGCCGTGTTCTGTATTTATTTATTCAACTGTCCCTTTCAATCTTTCA
ATCTTGAATCAAAATTTTGTATTGTAATCGTATCGACAACGAACATAACG
TACTCATCCCCACCCCGCCGTCCCGACTGCTGTCTGCGTCACCCCGCCAG
ACGAAAGAGGACGGCGATGCCGCAGGCGCAGGCGCGGGCAAGGGGCCGGA
CATGTCGCTCCCGCTCTCGGACCACCCCATGTCCGGCCCCGTCCCCTCCT
TAGCGGCCGCGGTGGCGGCGGTGGGCCCCCCCCCCCCTGCCTCCTCCTCT
CCGACTCAGTCGATGATGACGTCGCTCCCGCTGATACCGAACCAATCCGG
GGGAGATCAGCAGTCTTCCGCGTCGTCGCCCCCCACGTCGATGATGATGC
GGTCCTCCCTTCAGCAGCACCTCTCATCGCCGGAGAGCAAGAACAACGGG
GGCGGCGGCAGCAGCGACGACAACGGTAACGGCAACGGCAGCAGCCGGTC
TAGCGGGAACTTGGTGGAGGCGGCGGGCGCGGGGGGGCACGGCAGCGTGC
CGGTCTCATCCGCCGGCGGTGGCCCCGGCGGCCGCATGATCACTCCCGGA
GGCGTCGGAACCCCGTTCCTGGGCAGCGGCGGACTCGGCGTATTGGCGAG
CTTGACCGGCGGAAGTAGAGACCGAGACGGCTCCAGCTCCTCCCAGCCCG
GCGGCGGGAGAACTCTGCACCCGAAGTCGATGCCCACCTTCGTGAGCGTC
AGCGGACCCGGTTCGGGCGGCGCCGGGGGTGCGGCGGGAATATCGACCGG
CCCGTCGCACCTCCAGTCCTCGGGCTACGGGGGCTCGCAACAGGGGGGCT
ACGGCGGGACCGGGATGGGTCAAAACTCCGGGCGGAAGTTGGATCGAGGC
GGGGGTGGCGTGACGGGGGGCGGAGGGGGGCCGAGCGTGGGGGCCCCAAG
GGGGTTCGATTACGCGGATATGATGGCGCACGCGGCGGCTAACGCGGCCA
ACGTCAGAGCACGATCGGCCCAGCAGCAGCACAGCGATAATGGCGGCGGT
GGAGGCGGCGGCGGTGGTGCTAGCGGGGGCTCTAGTGCTGGGAGAAGCGG
TAGCCGGCGGGGCGGGGGCTGGCCCTCGTCTTGGCCGGCTGGCGGCGGTG
GCGGCGGTGGC
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Coding sequence (CDS) from alignment at C-linearis_contig74:460347..468307-

>mRNA_C-linearis_contig74.15013.1 ID=mRNA_C-linearis_contig74.15013.1|Name=mRNA_C-linearis_contig74.15013.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2868bp|location=Sequence derived from alignment at C-linearis_contig74:460347..468307- (Chordaria linearis ClinC8C monoicous)
ATGACCACCCGCCACGGGCTACCAATCGATGACCACCCGCCACGGGCTAC
CAATCGCGATGCATGCCGACGATGCCACCTCTTCAGGGGGAGAGAGCGAT
GAGAGAAGCAACGGAGGGGACCACGGGGGCGGTGGCAGCGGCGGCGACAT
GGACAACAAGAGGAGGAGGAGGTTGGAGCTCAACAGAAAGCGATGCATGC
CGACGATGCCACCTCTTCAGGGGGAGAGAGCGATGAGAGAAGCAACGGAG
GGGACCACGGGGGCGGTGGCAGCGGCGGCGACATGGACAACAAGAGGAGG
AGGAGGTTGGAGCTCAACAGAAAGGCGGCAAAGGAGTCTAGGAGGAGAAA
AAAGATGCGCATCGAGGAGCTGGGGCGAAGCGTGGTGTTCTTGACCAGAG
AAAACCAAGAGCTGCGAGAGCAGAACGAGATTTTCCGGCAAATGGTGGCG
GCAAAGGAGTCTAGGAGGAGAAAAAAGATGCGCATCGAGGAGCTGGGGCG
AAGCGTGGTGTTCTTGACCAGAGAAAACCAAGAGCTGCGAGAGCAGAACG
AGATTTTCCGGCAAATGGTGGCCAACGAGGTGGCGCCAGACACCAGCAAC
ACTGCTCTCAGCAAGTACCAGGCAGAAAACGCGGCGCTTCGGATGGCGCT
GTACGAGACGGTGAGAGAAGAGAAGCCTGCTGGTGCATGCAGCTATTTAA
TGCCATCTTTGCAGTTTGCCAACGAGGTGGCGCCAGACACCAGCAACACT
GCTCTCAGCAAGTACCAGGCAGAAAACGCGGCGCTTCGGATGGCGCTGTA
CGAGACGGTGAGAGAAGAGAAGCCTGCTGGTGCATGCAGCTATTTAATGC
CATCTTTGCAGTTTGACGGCGATGCCGCAGGCGCAGGCGCGGGCAAGGGG
CCGGACATGTCGCTCCCGCTCTCGGACCACCCCATGTCCGGCCCCGTCCC
CTCCTTAGCGGCCGCGGTGGCGGCGGTGGGCCCCCCCCCCCCTGCCTCCT
CCTCTCCGACTCAGTCGATGATGACGTCGCTCCCGCTGATACCGAACCAA
TCCGGGGGAGATCAGCAGTCTTCCGCGTCGTCGCCCCCCACGTCGATGAT
GATGCGGTCCTCCCTTCAGCAGCACCTCTCATCGCCGGAGAGCAAGAACA
ACGGGGGCGGCGGCAGCAGCGACGACAACGGTAACGGCAACGGCAGCAGC
CGGTCTAGCGGGAACTTGGTGGAGGCGGCGGGCGCGGGGGGGCACGGCAG
CGTGCCGGTCTCATCCGCCGGCGGTGGCCCCGGCGGCCGCATGATCACTC
CCGGAGGCGTCGGAACCCCGTTCCTGGGCAGCGGCGGACTCGGCGTATTG
GCGAGCTTGACCGGCGGAAGTAGAGACCGAGACGGCTCCAGCTCCTCCCA
GCCCGGCGGCGGGAGAACTCTGCACCCGAAGTCGATGCCCACCTTCGTGA
GCGTCAGCGGACCCGGTTCGGGCGGCGCCGGGGGTGCGGCGGGAATATCG
ACCGGCCCGTCGCACCTCCAGTCCTCGGGCTACGGGGGCTCGCAACAGGG
GGGCTACGGCGGGACCGGGATGGGTCAAAACTCCGGGCGGAAGTTGGATC
GAGGCGGGGGTGGCGTGACGGGGGGCGGAGGGGGGCCGAGCGTGGGGGCC
CCAAGGGGGTTCGATTACGCGGATATGATGGCGCACGCGGCGGCTAACGC
GGCCAACGTCAGAGCACGATCGGCCCAGCAGCAGCACAGCGATAATGGCG
GCGGTGGAGGCGGCGGCGGTGGTGCTAGCGGGGGCTCTAGTGCTGGGAGA
AGCGGTAGCCGGCGGGGCGGGGGCTGGCCCTCGTCTTGGCCGGCTGGCGG
CGGTGGCGGCGGTGGCGACGGCGATGCCGCAGGCGCAGGCGCGGGCAAGG
GGCCGGACATGTCGCTCCCGCTCTCGGACCACCCCATGTCCGGCCCCGTC
CCCTCCTTAGCGGCCGCGGTGGCGGCGGTGGGCCCCCCCCCCCCTGCCTC
CTCCTCTCCGACTCAGTCGATGATGACGTCGCTCCCGCTGATACCGAACC
AATCCGGGGGAGATCAGCAGTCTTCCGCGTCGTCGCCCCCCACGTCGATG
ATGATGCGGTCCTCCCTTCAGCAGCACCTCTCATCGCCGGAGAGCAAGAA
CAACGGGGGCGGCGGCAGCAGCGACGACAACGGTAACGGCAACGGCAGCA
GCCGGTCTAGCGGGAACTTGGTGGAGGCGGCGGGCGCGGGGGGGCACGGC
AGCGTGCCGGTCTCATCCGCCGGCGGTGGCCCCGGCGGCCGCATGATCAC
TCCCGGAGGCGTCGGAACCCCGTTCCTGGGCAGCGGCGGACTCGGCGTAT
TGGCGAGCTTGACCGGCGGAAGTAGAGACCGAGACGGCTCCAGCTCCTCC
CAGCCCGGCGGCGGGAGAACTCTGCACCCGAAGTCGATGCCCACCTTCGT
GAGCGTCAGCGGACCCGGTTCGGGCGGCGCCGGGGGTGCGGCGGGAATAT
CGACCGGCCCGTCGCACCTCCAGTCCTCGGGCTACGGGGGCTCGCAACAG
GGGGGCTACGGCGGGACCGGGATGGGTCAAAACTCCGGGCGGAAGTTGGA
TCGAGGCGGGGGTGGCGTGACGGGGGGCGGAGGGGGGCCGAGCGTGGGGG
CCCCAAGGGGGTTCGATTACGCGGATATGATGGCGCACGCGGCGGCTAAC
GCGGCCAACGTCAGAGCACGATCGGCCCAGCAGCAGCACAGCGATAATGG
CGGCGGTGGAGGCGGCGGCGGTGGTGCTAGCGGGGGCTCTAGTGCTGGGA
GAAGCGGTAGCCGGCGGGGCGGGGGCTGGCCCTCGTCTTGGCCGGCTGGC
GGCGGTGGCGGCGGTGGC
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