prot_C-linearis_contig74.15006.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15006.1
Unique Nameprot_C-linearis_contig74.15006.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length259
Homology
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BLAST of mRNA_C-linearis_contig74.15006.1 vs. uniprot
Match: D8LD48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD48_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 4.030e-30
Identity = 97/191 (50.79%), Postives = 116/191 (60.73%), Query Frame = 0 
Query:   71 RSSPRLHLTQKKPQTNARRGLG-VGARVASARQQQPSRARGXXXXXXXXXXXXXXXXXXXXXDGRAATKKAVQ-------ADGVSKVTNGLKGDLAAATETGMEKLEAGCDAFAAAALDRCSAAMSGREEEIEATEATLREMESREASVTSPCSEMLKTIESNNVSLSAVVERCSATLDSIQQAESRRLKS 253
            RSSPRLHLTQK+   NARRG G VG R AS  Q+Q ++A+G              XXXXXXX                  AD V+KV   LKGD  A  +  M K+EA C  F    L+ CSA +SGREE  E   A LRE+E+R+AS+ S  SEMLK +ESN+ +LSAVVERC A LDS+QQAESR+LKS
Sbjct:   53 RSSPRLHLTQKRTPANARRGSGPVGNRFAS-NQRQSTKAKGRTSSVGAHRDSSGGXXXXXXXXXXXXXXXXXXXXXXXSPADDVAKVMIDLKGDSTAVIDKAMGKVEAECGTFVMTVLESCSAGVSGREEHDETAAAALREIETRQASLASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRKLKS 242
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BLAST of mRNA_C-linearis_contig74.15006.1 vs. uniprot
Match: A0A6H5LLS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS0_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.820e-24
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 0 
Query:  143 ADGVSKVTNGLKGDLAAATETGMEKLEAGCDAFAAAALDRCSAAMSGREEEIEATEATLREMESREASVTSPCSEMLKTIESNNVSLSAVVERCSATLDSIQQAESRRLKS 253
            ADGV+K+   LKGD+ A  +  M K+EA C  F    L+ CSA +SGREE  E   A LREM++R+AS+ S  SEMLK + SN+ +LSAVVERC A LD++QQAESR+LKS
Sbjct:   59 ADGVAKLMIDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEHYETAAAALREMKTRQASMASRRSEMLKEVASNSSNLSAVVERCRAALDNLQQAESRKLKS 169
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD48_ECTSI4.030e-3050.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LLS0_9PHAE2.820e-2455.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:335837..339059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15006.1mRNA_C-linearis_contig74.15006.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 335837..339059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15006.1 ID=prot_C-linearis_contig74.15006.1|Name=mRNA_C-linearis_contig74.15006.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=259bp
EVRSTHGAPEAGVTKSTDRNLSYHAFTSMALFPKAQQGRRGVGDRGAVSS
SAAARKKTPRQNKQQKNVGGRSSPRLHLTQKKPQTNARRGLGVGARVASA
RQQQPSRARGGASASGARRNGTTTSRSGGGGDGRAATKKAVQADGVSKVT
NGLKGDLAAATETGMEKLEAGCDAFAAAALDRCSAAMSGREEEIEATEAT
LREMESREASVTSPCSEMLKTIESNNVSLSAVVERCSATLDSIQQAESRR
LKSRVSAQT
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