prot_C-linearis_contig73.14966.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14966.1
Unique Nameprot_C-linearis_contig73.14966.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1918
Homology
BLAST of mRNA_C-linearis_contig73.14966.1 vs. uniprot
Match: A0A6H5LGC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGC4_9PHAE)

HSP 1 Score: 721 bits (1861), Expect = 8.270e-227
Identity = 709/1627 (43.58%), Postives = 819/1627 (50.34%), Query Frame = 0
Query:  372 MRSDPSRYPAPNTVCYNAALMALMRRGRWREARGLLTEVAATAKAWGSDDGEXXXXXXXXXXQEAEVLDFLSYNSVIRACAAAGEAK---------------EALKTRDEMRAAGIAADAYTYEALAAACGMAGEWEAAEAVLREMMAGCAECAAGAGAGARAVTPPTATPAAPAAAGDTKGGDNAAAGGGSLVAETAAVEAEAVEAAXXXXXXXSNTYVGDAATAWNGDSAAAPPAPSPTAGHSYSSPSSASTATVGESWNQKLRHELRQRRRQEQLKNGVPPSPRMFHGLMEAYAQAGEWERALECLDDMLHGLKGALEGEQTAGAGQERVGVRAGVKPDSTSVGWAIQACATAGQWERALALLSGARSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMASLEARPVGQGAEAEGGNRSGFSSXXXXXXXXXXXXXQRTAGTGPAGVTKRGGDGETFAPWGGTVGPAAGGAFPPPSDSPVPRRSAESFRLVVEACRRAGDTRGALSAFAVMREEGFEPDLACFNEALRACAEGGGRLERAASFLEEVREAALEPNGVSYSAVLKACESCPNQKGAAKTAYDVIQTMIASSNAXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGRGKSGLPTP--SPPDGRDFLAAVRACAGGRSLPGSSSLALRLLTDLKVSAVASXXXXXXXXXXXXXVGIVR--LLPEHYHAAMAACGRDGNSGGVLALLSELRRGGPEGGGAAGEEAAVGLRTAALXXXXXXXXXXXXXXXXSGSESMKEEEEEEARRTVEATRVATASGLVPALSSSATYAAAAAALADMGEWEWCLVLLEELEQHGAEHDXXXXXXXXXXXXXAEAGLRLSPPETAPXXXXXXXXXXXXXXXXXXXXXEEAETVLQVELDET---STPVATTYPNGDGEATEASAETLAA---YTATVRACGEGRAGVKAVVGVLDRMGWAGVAPGQGTYAAAISAFQACGGVWEGIQEGEGEGGREREAKGGVSVEGAAWALIDYEKDRLGTG-WASPFLYSAAIKACAEAGDIANGRQLFAEGRRAAGIATDNARDVAAAAVXXXXXXXXXXTAPAASARVNPGVEAVYMATLTLCAAAGDGNLARDVLRWMKMEGFQTTQEAYVLAIEACCAPAVREDS-SYPAAPAAMPLPP-------PLRPSSSIPPAPRPSTGGTSAEGTVGFRRTLFSQEERGRDRAVGGASQEPAXXXXXXXATLPRNPLPDNGGDASNAQGDGGSGKGVEVEVVGGARVGARRGFSVGDADVVVEEG--RSRTSDVKQAAAGRLII------------QPPPPSEKETEAEQ---FGWVAIPGGRETPPEFDEDGEE--VADAAVAMGGARPMDDVSKRYEGAGAATGDSGXXXXXXXXXXXXXXVLVAETPGTAGVVAASTGARLEGDGGMPVSPPVA----SRAGAVSVLSPVPATTAAR-------QAGVSSGERGMPLVASAAPSAGSASAITSPEPSAGDSGSGGTAEAGGI--------------------EWQRAKAILDDMVAADHLPAPPAAAFQAVLGACDAAGRGGEALEVASAMVEAGHSPSRRLVARLMASHADVLDREMREMEAAAAAPAEDWG 1914
            MRSDPSRYPAPNTVC+NAALMALMR GRWREARGLL+EVA+   A G                 +  LDFLSYN+VIRACAAAGEA+               EALKTR+EMRAA I ADAYTYEAL+ ACG+AG+WEAAEAV+REM+AGC+                                                         XXXXXXX                                           + W+Q LRH  RQRRRQE+L+NGVPPSPR+ HGLMEAY++AGEWERA +CLDDM     G L G+     G+ERVG   GVKPDSTSVGWAIQACA AGQW+RALA  SGA+S+G        XXXXXXXXXXXXX        EMA+LE+    Q    EG   +   S                A  G   V +                           D   PRRS +S+RL +EACRR GDTRG +S F +M EEGFEPD+        ACAEGGGR ERAA+FLEE++EA L P+ VSYSA L ACESC +Q+GAAKTA+D+IQT+ AS++                            AG    SG P    SPP  RD+LAA+ ACA                          XXXXXXXXXXXXX       LLPEHY AAM ACGR GN+ GVL LLSELR       GA G  A+ G   A L   XXXXXXXXXXXXX                           G++P+L S A YAAAA ALAD+GEWEWCLVLLEELEQ  A+ D      XXXXXXX              XXXXX                   ETVL+VELDE+   + P + T                     YTA VRACG+G AGV+AVVG+L+RM WAGV PG+  YAAAISAF+ACGG  E         G E   +G +S E AA AL+++E  R G   WASPFLY                R  F EGRRAAG+ATD+A +VA    XXXXXXX   TAP   ARVNPGVEAVYM+ LT+CAAAGDG+LARDVLRWMK+EGFQ ++EAY+LAIEACC P V +DS + P   +    PP       PLRP       P  + G  S E   G RR LFS+ E         A     XXXXXXX         DNG  A             +  V G           VGD    V+E   R R ++   AAA                 QPP   E+E +AE+     WV IPGGR +PPEFDEDG E  VA     MGGA      +        A G  G                VA       V  A+T +R +GDGG   SP  A    SRAGAV+VLSP+ A            + G SSG+   P V   A  A                                               +W+RA+AILDDM AADHLP PP  AF+AVLGACD+AGR GEALE+A  MV AG SPS  L+ RLMASHAD LDRE REME AAA PAE+WG
Sbjct:    1 MRSDPSRYPAPNTVCHNAALMALMRDGRWREARGLLSEVASAPPAAGG----------------SVELDFLSYNTVIRACAAAGEAEDVRDNDEAFFGGKALEALKTREEMRAADIPADAYTYEALSTACGLAGDWEAAEAVVREMVAGCSSXXX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPWSQTLRH--RQRRRQERLENGVPPSPRVIHGLMEAYSRAGEWERAQQCLDDMRQAGSGWLPGDD----GRERVGAGTGVKPDSTSVGWAIQACAAAGQWDRALATFSGAKSDGIEPGQLCFXXXXXXXXXXXXXARATSLLAEMATLESE---QRLAREGEEENVSLSLG--------------ANNGVRTVPQLS------------------------EDDAAPRRSTDSYRLGMEACRRGGDTRGVMSTFVIMEEEGFEPDV--------ACAEGGGRFERAAAFLEEMKEAGLCPDNVSYSAALLACESCHDQEGAAKTAFDLIQTISASASESPDAGSNADANGGGESKP---------AGESTGSGGPVAPLSPPSSRDYLAALHACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPCLLPEHYCAAMTACGRGGNAQGVLELLSELREA-----GAGGVAASSG---APLDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------GMLPSL-SPAIYAAAANALADVGEWEWCLVLLEELEQLDADQDDNATGAXXXXXXXXXXXXXXX--XXXXXXXXXNINEEREVPEDGRGDAAAPETVLRVELDESGALAAPASATXXXXXXXXXXXXXXXXXXXXXYTAAVRACGKGGAGVQAVVGLLERMRWAGVDPGEDAYAAAISAFRACGGARE---------GEEASGRGVLSAEEAARALVEHETGRDGAADWASPFLY----------------RLFFVEGRRAAGVATDDAAEVAXXXXXXXXXXXDSGTAPKRPARVNPGVEAVYMSCLTMCAAAGDGSLARDVLRWMKLEGFQASEEAYMLAIEACCNPTVPQDSLAAPQQQSPFTTPPATSRQRLPLRP-------PAVANGAMSPEDLAGVRRKLFSEGEAPESEQHSAAXXXXXXXXXXXXXXRDDGDXGDNGVAAVLRLAT------ADTSVPG-----------VGDPASSVDEDVERGRVAEKVPAAAXXXXXXXXXXSLNPQRPQPPLGEEEERKAEERPGLEWVVIPGGRASPPEFDEDGNEKNVAPPGT-MGGAAWTTGGATAGXXXXGAVGFGGGD--------------VAPFSREGEVTTAAT-SRRDGDGGT-TSPASARGDVSRAGAVNVLSPLAAXXXXXXXXXXXXRGGRSSGQGRTPRVDPDAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWERARAILDDMTAADHLPPPPEEAFRAVLGACDSAGRVGEALEIAQVMVGAGFSPSIALMTRLMASHADELDRERREMEEAAAEPAEEWG 1433          
BLAST of mRNA_C-linearis_contig73.14966.1 vs. uniprot
Match: D7FX74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX74_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 1.120e-135
Identity = 564/1609 (35.05%), Postives = 647/1609 (40.21%), Query Frame = 0
Query:  371 RMRSDPSRYPAPNTVCYNAALMALMRRGRWREARGLLTEVAATAKAWGSDDGEXXXXXXXXXXQEAEVLDFLSYNSVIRACAAAGEAKEALKTRDEMRAAGIAADAYTYEALAAACGMAGEWEAAEAVLREMMAGCAECAAGAGAGARAVTPPTATPAAPAAAGDTKGGDNAAAGGGSLVAETAAVEAEAVEAAXXXXXXXSNTYVGDAATAWNGDSAAAPPAPSPTAGHSYSSPSSASTATVGESWNQKLRHELRQRRRQEQLKNGVPPSPRMFHGLMEAYAQAGEWERALECLDDMLHGLKGALEGEQTAGAGQERVGVRAGVKPDSTSVGWAIQACATAGQWERALALLSGARSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMASLEARPVGQGAEAEGGNRSGFSSXXXXXXXXXXXXXQRTAGTGPAGVTKRGGDGETFAPWGGTVGPAAGGAFPPPSDSPVPRRSAESFRLVVEACRRAGDTRGALSAFAVMREEGFEPDLACFNEALRACAEGGGRLERAASFLEEVREAALEPNGVSYSAVLKACESCPNQKGAAKTAYDVIQTMIASSNAXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGRGKSGLPTPSPPDGRDFLAAVRACAGGRSLPGSSSLALRLLTDLKVSAVASXXXXXXXXXXXXXVGIVRLLPEHYHAAMAACGRDGNSGGVLALLSELRRGGPEGGGAAGEEAAVGLRTAALXXXXXXXXXXXXXXXXSGSESMKEEEEEEARRTVEATRVATASGLVPALSSSATYAAAAAALADMGEWEWCLVLLEELEQHGAEHDXXXXXXXXXXXXXAEAGLRLSPPETAPXXXXXXXXXXXXXXXXXXXXXEEAETVLQVELDETSTPVA--TTYPNGDGEATEASAETLA-AYTATVRACGEGRAGVKAVVGVLDRMGWAGVAPGQGTYAAAISAFQACGGVWEGIQEGEGEGGREREAKGGVSVEGAAWALIDYEKDRLGTG-WASPFLYSAAIKACAEAGDIANGRQLFAEGRRAAGIATDNARDVAAAAVXXXXXXXXXXTAPAASARVNPGVEAVYMATLTLCAAAGDGNLARDVLRWMKMEGFQTTQEAYVLAIEACCAPAVREDS-SYPAAPAAMPLPPPLRPSSSIPPAPRPSTGGTSAEGTVGFRRTLFSQEERGRDRAVGGASQEPAXXXXXXXATLPRNPLPDNGGDASNAQGDGGSGKGVEVEVVGGARVGARRGFSVGDADVVVEEGRSRTSDVKQAAAGRLIIQPPPPS---------------EKETEAEQFGWVAIPGGRETPPEFDEDGEEV-ADAAVAMGGARPMDDVSKRYEGAGAATGDSGXXXXXXXXXXXXXXVLVAETPGTAGVVAASTGARLEGDGGMPVSPPVA----SRAGAVSVLSPVPATTAARQA----GVSSGERGMPLVASAAPSAGSASAITSPEPSAGDSGSGGTAEAGGI------------------------------------EWQRAKAILDDMVAADHLPAPPAAAFQAVLGACDAAGRGGEALEVASAMVEAGHSPSRRLVARLMASHADVLDREMREMEAAAAAPAEDWG 1914
            RMRSDPSRYPAPNTVC+NAALMALMR GRWREARGLL+EVA+   A G                    LDFLSYN+VIRACAAAGEA+EALKTR+EMRAAGI                     AAEAV+REM+                                                                                                                                                   AY++AGEWERA +CLDDM  G     E +     GQERVG   GVKPDSTSVGWAIQACA AGQW+RALA  SGA+S+G XXXXXXXXXXXXXXXXXXXXXX      EMA+LE+                                 R A         R G+ E  +P  G           P  D   PRRS +S+RL +EACRR GD RG +S F +M EEGFE D+                                                                                                                                                                                                                                                      +E EEE A R+ EAT+ A A+ ++P+L S A YAAAA ALAD+GEWEWCLVLLEELEQ  AE D             A      S      XXXXXXXXXXXXXXXXXXX  E  ETVL+VELDE     A  T     +G A EA+      AYTA VRACGEG AGV+ VVGVL+RM W GV PG+  YAAA+SAF        G +EGE   GR     G +  E AA AL+++E  R G   WASPFLY                R LF EGRRAAG+ATD+A +VA    XXXXXXX   TAP   ARVN GVEAVYM+ LT+CAAAGDG+LARDVLRWMK+EGFQ ++EAY+LAIEACC PAV +DS + P  P++   PP         P P  ++G TS E   G RR LFS+ E         + Q  A XXXXXX           G D   A         V      G  V       VGD    V+E   R    ++  A                           K     +  WV IPGGR +PPEFDEDG E        MGGA      +K   G   A G  G                     G A   AAS   R +GDGG   SP  A    SRAGAV+VLSP+ A           G SSG+R  P V                +P A                                                  +W+RA+AILDDM AADHLP PP  AF+AVLGACD+AGR GEALE+A  MV AG SPS  L+ RL+ASHAD LDRE REME AAA PAE+WG
Sbjct:  100 RMRSDPSRYPAPNTVCHNAALMALMRDGRWREARGLLSEVASATPATGG----------------GVELDFLSYNTVIRACAAAGEAEEALKTREEMRAAGIXXXXXXXXXXXXXXXXXXXXXAAEAVVREMV---------------------------------------------------------------------------------------------------------------------------------------------------AYSRAGEWERAQQCLDDMRQGSGWLPEDD-----GQERVGAGTGVKPDSTSVGWAIQACAAAGQWDRALATFSGAKSDGIXXXXXXXXXXXXXXXXXXXXXXATSLLAEMATLESE-------------------------------HRLA---------RLGEEEKASPSLGANNQGVRTVPQPSEDDAAPRRSTDSYRLGMEACRRGGDARGVMSTFVIMEEEGFEADV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEAEEEAASRSAEATQTAAAAEMLPSL-SPAIYAAAANALADVGEWEWCLVLLEELEQLDAEQDDG-----------ATGATATSTXXXXXXXXXXXXXXXXXXXXXXXXEQEAPETVLRVELDENGALAAPATATSQKEGSAPEAAXXXXXXAYTAAVRACGEGGAGVQTVVGVLERMRWVGVDPGEDAYAAAVSAFXXX--XXXGAREGEEGSGR-----GVLFAEEAARALVEHETGRDGAADWASPFLY----------------RMLFVEGRRAAGVATDDAAEVAXXXXXXXXXXXDSGTAPKRPARVNAGVEAVYMSCLTMCAAAGDGSLARDVLRWMKLEGFQASEEAYMLAIEACCNPAVPQDSPAAPQQPSSFTTPPATSRQRLPLPPPTFASGATSPEDLAGVRRKLFSEGE------APESEQHSAAXXXXXXXXXXXXXXXXXGDDGVAA---------VLRPATAGTSV-----PGVGDPASSVDEDVERGRVAEEMPAXXXXXXXXXXXXXXXXXXXXXXXXXXRKAERRPELEWVVIPGGRVSPPEFDEDGNEKNVTPPGTMGGAAWATGGAKAGPGGSGAVGFGGGDGAPFPRE------------GEATTAAAS---RRDGDGGT-TSPASARADVSRAGAVNVLSPLAAAXXXXXXXXXXGRSSGQRLTPRV----------------DPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADWERARAILDDMTAADHLPPPPEEAFRAVLGACDSAGRVGEALEIAQVMVGAGFSPSISLMTRLIASHADELDRERREMEEAAAEPAEEWG 1167          
BLAST of mRNA_C-linearis_contig73.14966.1 vs. uniprot
Match: A0A6H5K4Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Z1_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 9.440e-48
Identity = 97/145 (66.90%), Postives = 109/145 (75.17%), Query Frame = 0
Query:  134 DRRQKKFTIAMKELGYSSRWKAVPVLIAEAGRVGLPLNVICLNAAMSVLARSGRWYEALDLLAKMRRGEALRSVGL----AVSDQETNPRGNPLGERDGETKRVLFLPEPDTITFNAAISACGRGKKWKPAVDLLDTMRREGLTP 274
            D RQ+KFT  MK+LGY   WKAV  LIAEAGRVGLPLNVICLNAAMSVLARSGRWYEALDLL+ MRRG  L  V      + +DQ T  R   +   +  +  +L LPEPDTITFN AI+ACGRGKKWKPAV+LLD+MRREGL P
Sbjct:   69 DLRQRKFTKGMKQLGYRGGWKAVRGLIAEAGRVGLPLNVICLNAAMSVLARSGRWYEALDLLSMMRRGALLVDVDGGGDGSGADQGTGFREPRVEGEEASSSTMLVLPEPDTITFNTAITACGRGKKWKPAVELLDSMRREGLVP 213          
BLAST of mRNA_C-linearis_contig73.14966.1 vs. uniprot
Match: D7FX75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX75_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 3.750e-5
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0
Query:  247 AISACGRGKKWKPAVDLLDTMRREGLTP 274
            A+ ACGRGKKWKPAV+LLD+MRREGL P
Sbjct:   82 AVRACGRGKKWKPAVELLDSMRREGLVP 109          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LGC4_9PHAE8.270e-22743.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX74_ECTSI1.120e-13535.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4Z1_9PHAE9.440e-4866.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX75_ECTSI3.750e-582.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 305..377
e-value: 1.2E-11
score: 46.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 841..988
e-value: 1.8E-17
score: 65.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1816..1915
e-value: 3.9E-5
score: 25.4
coord: 378..526
e-value: 9.5E-22
score: 79.9
coord: 616..804
e-value: 7.7E-21
score: 76.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 872..927
e-value: 3.0E-5
score: 24.0
coord: 333..392
e-value: 1.4E-4
score: 21.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 242..275
e-value: 1.1E-4
score: 20.1
coord: 849..880
e-value: 8.9E-4
score: 17.3
coord: 277..308
e-value: 4.5E-5
score: 21.4
coord: 443..475
e-value: 1.3E-5
score: 23.0
coord: 644..669
e-value: 0.0017
score: 16.4
coord: 477..504
e-value: 0.0019
score: 16.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 645..669
e-value: 0.024
score: 14.9
coord: 175..200
e-value: 0.04
score: 14.2
coord: 477..503
e-value: 0.38
score: 11.1
coord: 443..472
e-value: 1.1E-4
score: 22.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 239..286
e-value: 7.3E-10
score: 38.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 345..375
score: 9.372
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 310..344
score: 10.161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 641..671
score: 8.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..274
score: 11.641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1054..1088
score: 5.831
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1372..1407
score: 7.256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..201
score: 8.342
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..413
score: 7.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..505
score: 8.714
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1441..1475
score: 6.456
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1156..1190
score: 6.982
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 733..767
score: 7.366
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 845..879
score: 9.679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 275..309
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 10.808
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1845..1879
score: 7.783
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 698..732
score: 8.714
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1275..1310
score: 6.61
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 880..915
score: 8.901
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 440..503
coord: 170..411
coord: 846..927
coord: 637..762
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..1917
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:626158..638032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14966.1mRNA_C-linearis_contig73.14966.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 626094..638200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14966.1 ID=prot_C-linearis_contig73.14966.1|Name=mRNA_C-linearis_contig73.14966.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1918bp
MPASHLTVLVAAAAAGNTVLAVAPRRGSSTDGLCFISPASSCAPTKTARR
TRPATAGLSSIAGRASTSTDGQKPALSGHGVTGVSAWWFRRPRAQLRAEA
REDGAAGAGADAGAEEGGDDVEEQEREKDFADLDRRQKKFTIAMKELGYS
SRWKAVPVLIAEAGRVGLPLNVICLNAAMSVLARSGRWYEALDLLAKMRR
GEALRSVGLAVSDQETNPRGNPLGERDGETKRVLFLPEPDTITFNAAISA
CGRGKKWKPAVDLLDTMRREGLTPDGFSYSTAISACKNCGQWEMALEILE
DMKRRGLGRDKHSLNAAIAACASAGRWEPAMEILKGMEANGPDPDVFTYG
SAIDALAQGGKLDLALQTLRRMRSDPSRYPAPNTVCYNAALMALMRRGRW
REARGLLTEVAATAKAWGSDDGEEGGGGGGGPPQEAEVLDFLSYNSVIRA
CAAAGEAKEALKTRDEMRAAGIAADAYTYEALAAACGMAGEWEAAEAVLR
EMMAGCAECAAGAGAGARAVTPPTATPAAPAAAGDTKGGDNAAAGGGSLV
AETAAVEAEAVEAAATATATASNTYVGDAATAWNGDSAAAPPAPSPTAGH
SYSSPSSASTATVGESWNQKLRHELRQRRRQEQLKNGVPPSPRMFHGLME
AYAQAGEWERALECLDDMLHGLKGALEGEQTAGAGQERVGVRAGVKPDST
SVGWAIQACATAGQWERALALLSGARSEGIPPGQLSYDAALLACAVAGQG
KRATSLLEEMASLEARPVGQGAEAEGGNRSGFSSQQQQQQQQQQQPPQRT
AGTGPAGVTKRGGDGETFAPWGGTVGPAAGGAFPPPSDSPVPRRSAESFR
LVVEACRRAGDTRGALSAFAVMREEGFEPDLACFNEALRACAEGGGRLER
AASFLEEVREAALEPNGVSYSAVLKACESCPNQKGAAKTAYDVIQTMIAS
SNAAPAAAAAAAAAAGGGTSVNADDDTTTRAGGRGKSGLPTPSPPDGRDF
LAAVRACAGGRSLPGSSSLALRLLTDLKVSAVASAAAAAAAGPSPPPVGI
VRLLPEHYHAAMAACGRDGNSGGVLALLSELRRGGPEGGGAAGEEAAVGL
RTAALGSRKPDAGSEGEDVGASGSESMKEEEEEEARRTVEATRVATASGL
VPALSSSATYAAAAAALADMGEWEWCLVLLEELEQHGAEHDDDDDDDDDT
NNTNAEAGLRLSPPETAPATAATTTTTTTTTSEEEEGGGEEAETVLQVEL
DETSTPVATTYPNGDGEATEASAETLAAYTATVRACGEGRAGVKAVVGVL
DRMGWAGVAPGQGTYAAAISAFQACGGVWEGIQEGEGEGGREREAKGGVS
VEGAAWALIDYEKDRLGTGWASPFLYSAAIKACAEAGDIANGRQLFAEGR
RAAGIATDNARDVAAAAVAAAAAAAEAGTAPAASARVNPGVEAVYMATLT
LCAAAGDGNLARDVLRWMKMEGFQTTQEAYVLAIEACCAPAVREDSSYPA
APAAMPLPPPLRPSSSIPPAPRPSTGGTSAEGTVGFRRTLFSQEERGRDR
AVGGASQEPAAAAAAAAATLPRNPLPDNGGDASNAQGDGGSGKGVEVEVV
GGARVGARRGFSVGDADVVVEEGRSRTSDVKQAAAGRLIIQPPPPSEKET
EAEQFGWVAIPGGRETPPEFDEDGEEVADAAVAMGGARPMDDVSKRYEGA
GAATGDSGGGGGGGGGAAAAAAVLVAETPGTAGVVAASTGARLEGDGGMP
VSPPVASRAGAVSVLSPVPATTAARQAGVSSGERGMPLVASAAPSAGSAS
AITSPEPSAGDSGSGGTAEAGGIEWQRAKAILDDMVAADHLPAPPAAAFQ
AVLGACDAAGRGGEALEVASAMVEAGHSPSRRLVARLMASHADVLDREMR
EMEAAAAAPAEDWGNDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat