prot_C-linearis_contig73.14959.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14959.1
Unique Nameprot_C-linearis_contig73.14959.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length392
Homology
BLAST of mRNA_C-linearis_contig73.14959.1 vs. uniprot
Match: D8LBK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK2_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 1.060e-70
Identity = 118/263 (44.87%), Postives = 160/263 (60.84%), Query Frame = 0
Query:  126 IDPISGDHTDKLFNTAAGNPIDVSITVTSMDSGNIPPHVMEKVVLYLKQWSVRGVCSQERGQEKGNLHVQGVATFGVMPTFDSPAKLHAALRKHMREKTGLVGKDRIKLVVKQLEGTQTFDGMVGYCCKDSGKSHYKTFRKNVTKAEANIALTAYRVLQRQDVKDNRVELGKKNFWPIVTRFKQENMKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVVEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHR 388
            I P +GD  D + ++  G P D S+T+ +    NI   +  +   ++ + +VRGV S ERG   GNLH+QG+ T  +   F    K  AALR+ +R   G    D++K+ +K+L   QTF GMVG C KD G+SH+KT  K V++ E NIALT YR LQR  V + R E+GKKNFW ++ RFKQE+++ + VSP+    W INDGE  PSHTW  P+SA  M    ADA +   ++P LFTRK  Y+LFFSGG  GR +   R
Sbjct:  125 ICPTTGDIADDIIDSGVGAPHDFSVTIGNRSGANIKESLFNEGCAWMTKRAVRGVTSMERGDMNGNLHLQGIWTLALKKDFGDSKKEEAALRRKLRVDCGWTAADKVKITIKRLIKQQTFSGMVGDCSKDEGRSHFKTVTKGVSRTEVNIALTEYRTLQRSVVSELRTEIGKKNFWGVLRRFKQEHLRGISVSPVQLISWYINDGEGMPSHTWICPTSAFAMEAARADAYFTALMSPSLFTRKDAYLLFFSGGQGGRVSGPSR 387          
BLAST of mRNA_C-linearis_contig73.14959.1 vs. uniprot
Match: D7FPH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH8_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.840e-70
Identity = 126/286 (44.06%), Postives = 173/286 (60.49%), Query Frame = 0
Query:  110 SGRGPGRPAR---AVGQPD-IDPISGDHTDKLFNTAAGNPIDVSITVTSMDSGNIPPHVMEKVVLYLKQWSVRGVCSQERGQEKGNLHVQGVATFGVMPTFDSPAKLHAALRKHMREKTGLVGKDRIKLVVKQLEGTQTFDGMVGYCCKDSGKSHYKTFRKNVTKAEANIALTAYRVLQRQDVKDNRVELGKKNFWPIVTRFKQENMKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVVEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWD 391
            S R PGRP +   A  +P  I P +GD  D + ++  G P D S+T+ +    NI   +  +   ++ + +VRG+ S ERG   GNLH+QG+ T  +   F    K  AALR+ +R   G    D++K+ +K+L   QTF GMVGYC KD G+SH+KT  K V++ E NIAL  YR LQR  V + R ++GKKNFW ++ RFKQE+++ + VSP+    W INDGE  PSHTW  P+SA  M    ADA +   ++P LFTRK  Y+LFFSGG  GR ++S   WD
Sbjct:  280 SARRPGRPRKSPPASREPSWICPTTGDIADDIIDSGVGAPHDFSVTIGNRSGANIKESLFNEGCAWMTKRAVRGITSMERGDINGNLHLQGIWTLALKKDFGDSKKEEAALRRKLRVDCGWTAADKVKITIKRLIKQQTFSGMVGYCSKDEGRSHFKTVTKGVSRTEVNIALAEYRTLQRFVVSELRTDIGKKNFWGVLRRFKQEHLRGISVSPVQLISWYINDGEGMPSHTWICPTSAFAMEAARADAYFTALMSPSLFTRKDAYLLFFSGGQGGRVSSSFAKWD 565          
BLAST of mRNA_C-linearis_contig73.14959.1 vs. uniprot
Match: D7G8U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U7_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.350e-61
Identity = 105/215 (48.84%), Postives = 138/215 (64.19%), Query Frame = 0
Query:  177 VRGVCSQERGQEKGNLHVQGVATFGVMPTFDSPAKLHAALRKHMREKTGLVGKDRIKLVVKQLEGTQTFDGMVGYCCKDSGKSHYKTFRKNVTKAEANIALTAYRVLQRQDVKDNRVELGKKNFWPIVTRFKQENMKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVVEAADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWD 391
            VRG+ S ERG   GNLH+QG+ T G++  FD P K  AA+RK +R+        ++K+V+K+L   QTF GM+GYC KD G+ H+KT  K V++ E N+AL  YR LQR  V ++RVELGKKNFW ++ RFKQE+++ + VSPL    W+I D +  PS +W  PSSA  M    ADA  +    P LF RKH Y+LFF+GG   R  TSH  WD
Sbjct:    2 VRGLVSLERGNVHGNLHLQGILTAGLVKYFDDPRKEEAAMRKSIRQACEWKSHVKVKIVIKRLMRQQTFSGMLGYCSKDQGRPHFKTSSKGVSQTEINVALAEYRKLQRVCVTEDRVELGKKNFWGLLRRFKQEHLRGIFVSPLQMVTWIIQDQQAVPSSSWICPSSAFPMDAARADAFGIALFCPSLFIRKHAYLLFFAGGQGDRIITSHEDWD 216          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBK2_ECTSI1.060e-7044.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPH8_ECTSI1.840e-7044.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8U7_ECTSI3.350e-6148.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:504505..506565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14959.1mRNA_C-linearis_contig73.14959.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 503900..507432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14959.1 ID=prot_C-linearis_contig73.14959.1|Name=mRNA_C-linearis_contig73.14959.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=392bp
MVPVLRRRGYGRRAGLATRRRLLPGVNPSHAVRSKRRQFLDDDEAAAEAA
GPARPVRRRIIEHETEEDRTPRRNQPAVSSPTVDPPLAVPTVAGARGSAA
SRPQGAGRASGRGPGRPARAVGQPDIDPISGDHTDKLFNTAAGNPIDVSI
TVTSMDSGNIPPHVMEKVVLYLKQWSVRGVCSQERGQEKGNLHVQGVATF
GVMPTFDSPAKLHAALRKHMREKTGLVGKDRIKLVVKQLEGTQTFDGMVG
YCCKDSGKSHYKTFRKNVTKAEANIALTAYRVLQRQDVKDNRVELGKKNF
WPIVTRFKQENMKALPVSPLLATQWLINDGEYKPSHTWSIPSSASGMVVE
AADAQWVCELTPRLFTRKHTYVLFFSGGYNGRTTTSHRFWD*
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