prot_C-linearis_contig73.14949.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14949.1
Unique Nameprot_C-linearis_contig73.14949.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length89
Homology
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A6H5JGF9_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 9.600e-44
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0
Query:    1 MTARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVKAAAGVTVERR 88
            M+ARLSGVQREVN+LYRLLLRAA++KDGG W G+TT LVRAEFR QAESV R DFRTIEHLLR GNKKLKLLKMPGVKAAAG+TV RR
Sbjct:    1 MSARLSGVQREVNKLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVARTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVVRR 88          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: D7FX23_ECTSI (Heat shock protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX23_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.740e-40
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVKAAAGVTVERR 88
            S  +REVNQLYRLLLRAA++KDGG W G+TT LVRAEFR QAESVGR DFRTIEHLLR GNKKLKLLKMPGVKAAAG+TV RR
Sbjct:   52 SPTKREVNQLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVGRTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVARR 134          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A7S1ZYE5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYE5_TRICV)

HSP 1 Score: 65.1 bits (157), Expect = 1.240e-11
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   14 QLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVKAAAGVTVER 87
            + + +LL   K       D TTT+  R+EFR++A S+ R DFRTIEH++R G K++KLL+MPGV         R
Sbjct:   41 EYFLVLLSTDKCPSSPPGDATTTSYARSEFRKKAASIPRNDFRTIEHMIRWGQKQIKLLRMPGVSFVGSPNARR 114          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: C5DJD6_LACTC (KLTH0F15576p n=2 Tax=Lachancea TaxID=300275 RepID=C5DJD6_LACTC)

HSP 1 Score: 62.8 bits (151), Expect = 4.060e-11
Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 MTARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVK 78
            M  RLSG+QREV Q+YR  +RAA  K         T  +R EFR Q + + R DF TIEHLLRVG+++L++   P VK
Sbjct:    1 MAKRLSGLQREVLQMYRQCIRAAHDKPKANQPNFVTH-IRKEFR-QYQDLPRKDFSTIEHLLRVGHRRLEMYSQPEVK 76          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A6U0URI4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URI4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.620e-10
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLK 73
            SGVQ EV  LYR LLR AK K   G D  T A+VR +FRE A SV R++ R IEHL+R G KK++LL+
Sbjct:   65 SGVQTEVLNLYRQLLRLAKAK---GPD--TYAMVRNKFREDARSVKRSEIRLIEHLVRQGKKKVRLLQ 127          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A5J5FAV1_9PEZI (Complex 1 protein-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5FAV1_9PEZI)

HSP 1 Score: 61.6 bits (148), Expect = 1.670e-10
Identity = 38/78 (48.72%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    1 MTARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVK 78
            M  RLSG+QREV  LYR  LR  K K             R EFR+    + + DF TIEHLLRVG KKL+L   PG+K
Sbjct:    1 MMPRLSGIQREVLSLYRSCLRMIKEKPAESQQNFRE-YARHEFRQNL-GLNKKDFATIEHLLRVGQKKLELYSQPGIK 76          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A4S2N7G0_9PEZI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N7G0_9PEZI)

HSP 1 Score: 60.1 bits (144), Expect = 5.020e-10
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    2 TARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVKAAA 81
            T RLSG+QR+V  LYR  LRA + K           + R EF++   S+ + DF TIEHLLRVG +KL++   PGVK  A
Sbjct:    4 TKRLSGIQRDVLSLYRKCLRAIREKPVEA-QPNFRLVARREFQKNL-SISKKDFVTIEHLLRVGQRKLEMYSQPGVKNIA 81          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A5J5ECR0_9PEZI (Complex 1 protein-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5ECR0_9PEZI)

HSP 1 Score: 59.7 bits (143), Expect = 6.610e-10
Identity = 37/75 (49.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    4 RLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVK 78
            RLSG+QR+V  LYR  LR  K K            VR EFR     + + DF TIEHLLRVG KKL+L   PG+K
Sbjct:    3 RLSGIQRDVLSLYRSCLRMIKKKPAESQHNFRD-YVRHEFRHNF-GLNKKDFATIEHLLRVGRKKLELYSQPGIK 75          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A3N4KNK3_9PEZI (Complex1_LYR_dom domain-containing protein n=1 Tax=Morchella conica CCBAS932 TaxID=1392247 RepID=A0A3N4KNK3_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 3.690e-9
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVK 78
            +G+QR+V  LYRL LR A+ K     +       R EFR   + + + DF TIEHLLRVG KKL+    PG+K
Sbjct:    4 TGIQRDVLALYRLCLREARKKPSDARENFRN-FARDEFRAHLD-IKKKDFATIEHLLRVGQKKLETYSQPGIK 74          
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Match: A0A0L0SFN4_ALLM3 (Complex1_LYR_dom domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SFN4_ALLM3)

HSP 1 Score: 57.8 bits (138), Expect = 4.370e-9
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    2 TARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESVGRADFRTIEHLLRVGNKKLKLLKMPGVK 78
            T RLSG+QR+V  LYR  LRAA+ K    +    T  V+ EFR+  +     D   IEHL+RVG ++L+ L+ P +K
Sbjct:    6 TRRLSGLQRDVLHLYRASLRAARTKPAE-YRANWTTFVQHEFRKTMDMHAVRDAHAIEHLVRVGRRRLETLRNPAIK 81          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGF9_9PHAE9.600e-4484.09Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D7FX23_ECTSI8.740e-4083.13Heat shock protein, putative n=1 Tax=Ectocarpus si... [more]
A0A7S1ZYE5_TRICV1.240e-1143.24Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
C5DJD6_LACTC4.060e-1148.72KLTH0F15576p n=2 Tax=Lachancea TaxID=300275 RepID=... [more]
A0A6U0URI4_9STRA1.620e-1057.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A5J5FAV1_9PEZI1.670e-1048.72Complex 1 protein-domain-containing protein n=1 Ta... [more]
A0A4S2N7G0_9PEZI5.020e-1046.25Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A5J5ECR0_9PEZI6.610e-1049.33Complex 1 protein-domain-containing protein n=1 Ta... [more]
A0A3N4KNK3_9PEZI3.690e-945.21Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A0L0SFN4_ALLM34.370e-942.86Complex1_LYR_dom domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 10..70
e-value: 3.1E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR13675LYR MOTIF-CONTAINING PROTEIN 2coord: 2..81
NoneNo IPR availablePANTHERPTHR13675:SF1SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIALcoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:293531..295875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14949.1mRNA_C-linearis_contig73.14949.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 293531..295875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14949.1 ID=prot_C-linearis_contig73.14949.1|Name=mRNA_C-linearis_contig73.14949.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=89bp
MTARLSGVQREVNQLYRLLLRAAKLKDGGGWDGTTTALVRAEFREQAESV
GRADFRTIEHLLRVGNKKLKLLKMPGVKAAAGVTVERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR