prot_C-linearis_contig7.14629.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14629.1
Unique Nameprot_C-linearis_contig7.14629.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length230
Homology
BLAST of mRNA_C-linearis_contig7.14629.1 vs. uniprot
Match: D7FTY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 5.210e-23
Identity = 69/139 (49.64%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    8 KGASPRAGVNKNFLLNTVHGLKSHNKREEEEECWRQHNLDQKAKRRRGRSHDDAACRARRVSSTDAAHRAASPISDADTRQFWAEQKRKAMTAALSTSSVGALLEGARPDSKHGDRCKSREQEQRSDGSDDGTSILSGN 146
            +G S RAGVNKNFLLNTVHGLKSHNKREEEE+CWRQH L+Q+A R R  +HD  A R RR    D    +AS  SD D R+FWAE+K + MTA        A            DR + RE       S++GT   +GN
Sbjct:    8 RGGSGRAGVNKNFLLNTVHGLKSHNKREEEEDCWRQHGLEQRA-RERLLAHD--ANRNRRNVPADGGDTSASHASDVDARRFWAERKERTMTATTPAIDPSAAXXXXXXXXXSVDRKRQRED------SEEGTGRANGN 137          
BLAST of mRNA_C-linearis_contig7.14629.1 vs. uniprot
Match: A0A6H5KLX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.120e-21
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    8 KGASPRAGVNKNFLLNTVHGLKSHNKREEEEECWRQHNLDQKAKRRRGRSHDDAACRARRVSSTDAAHRAASPISDADTRQFWAEQKRKAMTA 100
            +G S RAGVNKNFLLNTVHGL+SHNKREEEE+CWRQ+ L+Q+A R R  +HD  A R R+    D    +AS  SD D R+FWAE+K +AMTA
Sbjct:   19 RGGSSRAGVNKNFLLNTVHGLQSHNKREEEEDCWRQYGLEQRA-RERLLAHD--ANRNRQKFPADGGDTSASHASDVDARRFWAERKERAMTA 108          
BLAST of mRNA_C-linearis_contig7.14629.1 vs. uniprot
Match: T0Q3C6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3C6_SAPDV)

HSP 1 Score: 57.4 bits (137), Expect = 1.790e-6
Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   11 SPRAGVNKNFLLNTVHGLKSHNKREEEEECWRQHNLDQKAKRRRGRSHDDAAC---RARRVSST-------DAAHRAASPISDADTRQFWAEQKRKAMTAALSTSSVGALLEG 113
            +P   VNK FLLNT+ G+ SHNKR+E ++CWR+ +L+ K  RRR            R RR SS+           R+ SP    D R +WAE+K      A  T+ + A L+G
Sbjct:   52 APATNVNKGFLLNTIRGVDSHNKRQEIDQCWRKRDLEAKVHRRRSXXXXXXXXXERRHRRRSSSLXXXXXXXXXXRSPSPTRAEDERSYWAERK------AARTAELLAQLDG 158          
BLAST of mRNA_C-linearis_contig7.14629.1 vs. uniprot
Match: A0A067D463_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D463_SAPPC)

HSP 1 Score: 56.2 bits (134), Expect = 4.480e-6
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   11 SPRAGVNKNFLLNTVHGLKSHNKREEEEECWRQHNLDQKAKRRRGRSHD 59
            +P   VNK FLLNT+ G+ SHNKR+E ++CWR+ +L+ K  RRR RS +
Sbjct:   52 APATNVNKGFLLNTIRGVDSHNKRQEIDQCWRKRDLEAKVHRRRSRSRE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTY1_ECTSI5.210e-2349.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLX3_9PHAE2.120e-2161.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
T0Q3C6_SAPDV1.790e-638.05Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067D463_SAPPC4.480e-653.06Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3865987..3866676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14629.1mRNA_C-linearis_contig7.14629.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3865942..3867548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14629.1 ID=prot_C-linearis_contig7.14629.1|Name=mRNA_C-linearis_contig7.14629.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=230bp
MQGQAGGKGASPRAGVNKNFLLNTVHGLKSHNKREEEEECWRQHNLDQKA
KRRRGRSHDDAACRARRVSSTDAAHRAASPISDADTRQFWAEQKRKAMTA
ALSTSSVGALLEGARPDSKHGDRCKSREQEQRSDGSDDGTSILSGNDSMK
RGRKKDVRKTKKKKKRKREPRHSSSSSSSSSSSSSASESDVDEGRREGGK
ASRAGDKKRHHQRKRKKSKKHSSRKKSRT*
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