prot_C-linearis_contig7.14519.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14519.1
Unique Nameprot_C-linearis_contig7.14519.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length239
Homology
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 7.740e-71
Identity = 130/239 (54.39%), Postives = 153/239 (64.02%), Query Frame = 0
Query:    1 MRLWRLLPPVETRLRAAGYDLTFFDWRGAEANEPLAAAGGGGVAATSC------GDAVAEHILGCEIYWSRHGDDVRRGGEEAARTHAGGGRATREEEGSESIGVDGTCSCGSGDIAAVGALSSPAAVSPEGASFVGLMGEDDSGTWVQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREGNFVYGNQRSVPYKMRRVVAPGALAWTLGAEHRTKEAYAEKMSAIGVVPGQRMGPPVR 233
            MRLWRLLP VE RLRA  YDLT F W   ++N+   + G    +   C      G+ V E + GCEIYW RH    + GGE+      G     +++    ++        G+G+ AA G           G SFVGLMG+DDSGTWV+SQNV GLEILVKDDLR+W D LWVNDRGFDR+GNFVYGNQR VPYKMRRV A G L WTLGA HRT++ YAEKMSAIGV  GQR+ PPVR
Sbjct:  188 MRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRH----QAGGEDEKSMPGGISGPGKQDANGGAVPER-----GAGEDAAGGG----------GKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPVR 407          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 1.250e-58
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 0
Query:  126 GASFVGLMGEDDSGTWVQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREGNFVYGNQRSVPYKMRRVVAPGALAWTLGAEHRTKEAYAEKMSAIGVVPGQRMGPPVR 233
            G SFVGLMGEDDSGTWV+SQNV GLEILVKDDLR+W D+LWVNDRGFDR+GNFVYGNQR VPYKMRRV A G L WTLGA HRT++ YAE+MSAIGV PGQR+GPPVR
Sbjct:   32 GKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAIGVTPGQRLGPPVR 139          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 86.3 bits (212), Expect = 2.900e-16
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
Query:  142 VQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREG-NFVYGNQRSVPYKMRRV----------VAPGALAWTLGAEHRTKEAYAEKMSAIG 221
            V+SQ + G +IL+KD L +W D+LW++DRGFD +   F+YGNQR VPY++ RV          +    LAWTLG + R++  Y +KM A+G
Sbjct:  218 VESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A7S2A9U5_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9U5_TRICV)

HSP 1 Score: 84.0 bits (206), Expect = 3.530e-16
Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 0
Query:  142 VQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREG-NFVYGNQRSVPYKMRRV----------------------VAPGALAWTLGAEHRTKEAYAEKMSAIG 221
            V S  + G +I V+D+L +W   LW+NDRG+D EG +FVYGNQR VPY+M RV                      V  G L WTLG  HRT+  Y E++ AIG
Sbjct:   92 VPSLMIPGAKIRVRDELSLWDGALWINDRGYDPEGGDFVYGNQRGVPYEMGRVTTFLRGDGDGEGSPPLFATERTVVNGDLKWTLGPRHRTEGLYRERVEAIG 194          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A7S2SCY1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCY1_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.590e-15
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 0
Query:  138 SGTWVQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREG--NFVYGNQRSVPYKMRRV--------------VAPGALAWTLGAEHRTKEAYAEKMSAI 220
            +GT V SQ + G+ I ++D+L +W ++ W+NDRG D +   +F+YGNQR +PYK++RV              +    LAWTLG +HRT+  Y + M+ I
Sbjct:  156 NGTTVASQVIPGMYINIRDELSLWKNEFWINDRGLDPQNVSSFIYGNQRGIPYKLKRVTQNNNIFRQWKPRMIHDPKLAWTLGPDHRTEFDYQQMMNEI 254          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 82.0 bits (201), Expect = 1.800e-14
Identity = 49/119 (41.18%), Postives = 62/119 (52.10%), Query Frame = 0
Query:  128 SFVGLMGEDDSGTWVQSQN-VAGLEILVKDDLRVWSDQLWVNDRGFDREGN-----------FVYGNQRSVPYKMRRV------------VAP--GALAWTLGAEHRTKEAYAEKMSAI 220
            SF   M    SG  V S + + G  IL+KD+L +W D+ W+NDRG+D +G            FVYGN+R VPYK+ RV            VAP  G L WTLG  +RT   Y  K+ AI
Sbjct:  271 SFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A7S4HD69_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HD69_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 4.620e-12
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  149 GLEILVKDDLRVWSDQLWVNDRGFDREGNFVYGNQRSVPYKMRR 192
            G+ I+V+DD+ +WSD LWVNDRG D EGN++YGN R VPYKM R
Sbjct:   92 GMPIVVRDDVTLWSDALWVNDRGADMEGNYLYGNVRDVPYKMDR 135          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A7R9ZKH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKH3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.970e-11
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  142 VQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREGN-FVYGNQRSVPYKMRRV-------------------------VAPGALAWTLGAEHRTKEAYAEKMSAIG 221
            V+SQ + G +I + D L ++ D  ++NDRGF+ E N ++YGNQRSVPY++ RV                         V   +LAWTLG  HRT E Y  K+  IG
Sbjct:  252 VESQMMPGQKIKILDQLSLYDDVFYINDRGFNPETNEYIYGNQRSVPYRLERVAKWKGGDADEDNDADDSVVTMVGRDVVNESLAWTLGDAHRTPEEYKSKIDEIG 357          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 72.8 bits (177), Expect = 3.660e-11
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  152 ILVKDDLRVWSDQLWVNDRGFDREGNFVYGNQRSVPYKMRRVVAPGALAWT 202
            ILVKDDL +  ++LWVNDRGFD  G+FVYGN+R VPYKM+R      L WT
Sbjct:  428 ILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478          
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Match: A0A7S3DRY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRY0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.080e-10
Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 0
Query:  142 VQSQNVAGLEILVKDDLRVWSDQLWVNDRGFDREGN-FVYGNQRSVPYKMRRV------------VAPGA--------LAWTLGAEHRTK 210
            V+SQ + G +IL++D L +W D+LW++DRG D +   F+YGNQ  VPY+++RV            ++ G+        LAWTLG  HRT+
Sbjct:  145 VESQMMPGQKILIRDQLSLWKDELWIHDRGHDPDTMAFIYGNQDGVPYRLQRVCNIEDVAGTDEPISAGSHRTDIYNDLAWTLGPAHRTE 234          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE7.740e-7154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI1.250e-5882.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B7G7Q1_PHATC2.900e-1645.05Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2A9U5_TRICV3.530e-1643.69Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S2SCY1_9STRA2.590e-1539.39Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
K0TER5_THAOC1.800e-1441.18Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4HD69_9EUKA4.620e-1265.91Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7R9ZKH3_9STRA1.970e-1138.68Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A5J4Z4Z5_PORPP3.660e-1162.75Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3DRY0_9STRA1.080e-1040.00Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 145..192
e-value: 2.4E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2826199..2826915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14519.1mRNA_C-linearis_contig7.14519.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2825922..2827143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14519.1 ID=prot_C-linearis_contig7.14519.1|Name=mRNA_C-linearis_contig7.14519.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=239bp
MRLWRLLPPVETRLRAAGYDLTFFDWRGAEANEPLAAAGGGGVAATSCGD
AVAEHILGCEIYWSRHGDDVRRGGEEAARTHAGGGRATREEEGSESIGVD
GTCSCGSGDIAAVGALSSPAAVSPEGASFVGLMGEDDSGTWVQSQNVAGL
EILVKDDLRVWSDQLWVNDRGFDREGNFVYGNQRSVPYKMRRVVAPGALA
WTLGAEHRTKEAYAEKMSAIGVVPGQRMGPPVRPPAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT