prot_C-linearis_contig7.14518.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14518.1
Unique Nameprot_C-linearis_contig7.14518.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length173
Homology
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 3.270e-49
Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 0
Query:    8 LLLLRALPVTGLLGSWSALGSRLSQRVQRPCTGASPATSGADVQNKRP-EALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPSLVPEQVAAAGXXXXXXXXGDRDGEEGAXXXXXXGGLD---RPLQVVAAKYYFNGDSNVVFRYRLYSFHLCP 173
            LLLL+ +P  GLL SW+A  SRLSQ+VQR CT     T G  +    P +A++ +LL+LF+GEFDNY QV+ DRKAGM  GPGGGHEHIHCSLK LDP+ VP QVAA  XXXXXXXX         XXXXXX       RPL VVAAKYYFNGDSNVVFRYRLYSFH CP
Sbjct:    7 LLLLQVVPSAGLLVSWTASRSRLSQKVQRSCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACP 176          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 5.110e-47
Identity = 103/171 (60.23%), Postives = 116/171 (67.84%), Query Frame = 0
Query:    8 LLLLRALPVTGLLGSWSALGSRLSQRVQRPCTGASPATSGADVQNKRP-EALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPSLVPEQVAAAGXXXXXXXXGDRDGEEGAXXXXXXGGLDRPLQVVA----AKYYFNGDSNVVFRYRLYSFHLCP 173
            LLLL+ +P  GLL SW+A  SRLSQ+VQR CT     T G  +    P +A++ +LL+LF+GEFDNY QV+ DRKAGM  GPGGGHEHIHCSLK LDP+ VPEQVA   XXXXXXXX         XXXXXX               AKYYFNGDSNVVFRYRLYSFH CP
Sbjct:    7 LLLLQVVPSAGLLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHACP 177          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A7S3LBP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBP4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.050e-12
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   31 SQRVQRPCTGASPATSGADVQNKRPEALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPL 102
            + R +   T +SP +S  D  + + + L ++LL  F+G+FDNY QV++DRK G+    GGGHEHIHCSL P+
Sbjct:   33 ANRNEAVVTVSSPTSSSHDEGSSKAD-LWEELLSRFQGDFDNYNQVVQDRKEGLLPREGGGHEHIHCSLVPV 103          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A1E7FNR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNR9_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.280e-10
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   21 GSWSALGSRLSQRVQRPCTGASPATSGADVQNKRPEALLDDLL-ELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPS 105
            G  SA+     + V  PC   S      D   +     +  +L E F+G+FDNY QV+EDRK G+    GGGHEH HC+L P+  S
Sbjct:   54 GRHSAVTGTFQEMVVEPCESTSSVDGVGDGDGESSHEKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLVPVTES 139          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.190e-10
Identity = 45/136 (33.09%), Postives = 61/136 (44.85%), Query Frame = 0
Query:   32 QRVQRPCTGASPATSGADVQNKRPEALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPSLVPEQVAAAGXXXXXXXXGDRDGEEGAXXXXXXGGLDRPLQVVAAKYYFNGDSNVVFRYRLY 167
            +R+   C   S ATS  D  N         LL  F+G+FDNY QVI DR   +A   GGGHEHIHC+L P   + V ++               R   +               Q + A +YFNG+   +FR+R+Y
Sbjct:   39 KRINVECFQTSDATSD-DSDN-----YFHHLLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTLVPCPHTAVTQE--------------QRQNND---------------QWILAAFYFNGNPRQIFRFRMY 139          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 65.5 bits (158), Expect = 1.850e-9
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   41 ASPATSGADVQNKRPEALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPL 102
            AS   S +D       ++   LL+ F+G+FDNY QVI DRK G+    GGGHEHIHCSL P+
Sbjct:   45 ASNTNSASDHVGNLDASVWKALLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPV 106          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 63.9 bits (154), Expect = 8.140e-9
Identity = 39/106 (36.79%), Postives = 51/106 (48.11%), Query Frame = 0
Query:   62 LLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPSLVPEQVAAAGXXXXXXXXGDRDGEEGAXXXXXXGGLDRPLQVVAAKYYFNGDSNVVFRYRLY 167
            L   F+G+FDNY QV+ DR+ G+  G GGGHEHIHC+L P                      GD D E          G  R  + + A +YFNG+   +FR+R Y
Sbjct:   80 LTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTLVPCP------------------DFGD-DAE----------GDTRRSRWILAAFYFNGNPQQIFRFRAY 156          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A7S1ZWM5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWM5_TRICV)

HSP 1 Score: 62.4 bits (150), Expect = 2.810e-8
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   62 LLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPSLV 107
            LL  F+G+FDNY QV  D   G+    GGGHEHIHCSL P+D SLV
Sbjct:   38 LLRRFQGDFDNYVQVRRDHAGGLTPREGGGHEHIHCSLVPVDASLV 83          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A7S3DS98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS98_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.970e-8
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   54 RPEALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPL 102
            + + L  D+LE F+G+FDNY QV+ DR+ G     GGGHE+IHC+L P+
Sbjct:   91 KKDQLWADMLERFQGDFDNYNQVVVDRENGKLPREGGGHENIHCTLVPV 139          
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Match: A0A7S4AFR0_9STRA (Hypothetical protein n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFR0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.250e-7
Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   62 LLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLKPLDPS 105
            L E F G+FDNY QV+EDRK  +    GGGHEH HC+L PL  S
Sbjct:   30 LSECFRGDFDNYAQVLEDRKQNLEPREGGGHEHFHCTLVPLTES 73          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE3.270e-4964.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T2_ECTSI5.110e-4760.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3LBP4_9STRA2.050e-1245.83Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1E7FNR9_9STRA5.280e-1039.53Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2PZJ6_9STRA7.190e-1033.09Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B7G7Q1_PHATC1.850e-950.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
K0TER5_THAOC8.140e-936.79Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1ZWM5_TRICV2.810e-860.87Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3DS98_9STRA6.970e-851.02Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S4AFR0_9STRA2.250e-759.09Hypothetical protein n=4 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2824396..2825882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14518.1mRNA_C-linearis_contig7.14518.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2824370..2825882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14518.1 ID=prot_C-linearis_contig7.14518.1|Name=mRNA_C-linearis_contig7.14518.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=173bp
MLSRGAMLLLLRALPVTGLLGSWSALGSRLSQRVQRPCTGASPATSGADV
QNKRPEALLDDLLELFEGEFDNYGQVIEDRKAGMAAGPGGGHEHIHCSLK
PLDPSLVPEQVAAAGGGGAASSSGDRDGEEGAGAGVGVGGLDRPLQVVAA
KYYFNGDSNVVFRYRLYSFHLCP
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