prot_C-linearis_contig112.1550.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1550.1
Unique Nameprot_C-linearis_contig112.1550.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length954
Homology
BLAST of mRNA_C-linearis_contig112.1550.1 vs. uniprot
Match: D7FVT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT4_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 1.690e-216
Identity = 524/994 (52.72%), Postives = 571/994 (57.44%), Query Frame = 0
Query:   29 DGNGHA-GTNGWSAHVRYFLARYPLEARDFVAQRLAAYGIRSLLSSHRMENLTLDTLLSATDAADRDVLSLMRQHARGRREQRGGLHRSAAPASPRRSRVGVPSPQRRHQPHAIDDSSQAPREALRERGIT-RNTNATPPSRMASALRPGAAGS----RKRHEIVGRPDVLTRYPFVDDLGNKQGGGVGAVMHRATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTAKGGXXXXXXXXXX-VRAMGRSGKDVHLVMALARECLPPTLAHAARDTSTLSSASTQRGAEEG-WARDGQNMFISERRWIKIVAHVIRRLWDMDGPPSSFLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPLGMDFQQPVWRPVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GGLTADXXXXXXXXXXXXXXXXXPSAISADDVDGDYYGRGGGGEGEDEAGEALRAWEEEGESWVGAGRSLAWAPPGEED----GEVGGVGEDGSSQGAGEGRLAXXXXXXXXXXXXXXXXXXXXXXXXXARRSAVKDVVARRRLGHLETG---------------------GXXXXRKDSSASDCNSQPRGHTPGEHALDIAGAFLESSLMTRLAGGDWFDSEDGEPTSSFSSA-WETEEAVRVPPGXXXXXXXXXXXXXXXXXXX--------RNESPRREDGGHGVPATRRRQAYTGWLGDFGPVHTHTVREVAGTGDEEEE-----------DGRXXXXXXXXXXXXXRDRG-SGPRPAGQEEEDGKERTRRSWRLDE---GGAPSGGGDVVERSEGTEKDGGVDESTAAVDSVAPRVGGADATLPGAADSSSDIPETGADDGNDSNDEVENMGTAETGDVNVVAPLDGGLDAYLQLASDSGALHRGG----------GGRLGRGDGGGTAXXXXXXXXXXXXXXXXXXXXXTSGSWWEEDRSEVSTSPV 953
            DG GH  G +GWSAHVRYFLARYP E RD VAQRLA+YGIRSLLSSHR ENL+LD LL+ATDAADR+VLS MR+HARGR +QRG    +AAP    RSR   P  Q+R  P A   ++ AP E LRER +  +N +A PP         GAAG+    RKRH +  RPDVLTRYPFVDDL   QGGGVGAVMH+ATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLT+KG XXXXXXXXXX  R   RS KDVHLVMALARECLPPTLAHAARDTSTLS+ASTQ GAE G W RDGQNMF+SERRWIK+VAHVIRRLWDMDG P   +AA XXXXXXXXXXXXXXXXXXX             A P GM+FQQPVW+PVGG      XXXXXXXXXXXXXX                  GGL AD                  S ISA D DG  Y   G         EALRAWEE  E WVGAGRS+A AP  E++    GE GG+       GA  G                            ARRSAV+D VARRRL  L+ G                     G       S A++ +S  RGHTPGEHALDIAGAFLESSLMTRLAGGDWFD EDG+  S+ SSA WE E AVR P G                           RN   RR DGG       RR+A+TGWLGDFGPVHTHTVREVAG  +EEEE           DGR             RD G S PR  G  +     R       +E   GG   GG   V  SE   +  GVDEST A           + + PG   S+S       D G         +G  ETGD NVVAPLDGGLDAYLQLASD GA               GGR G G GGG+                      TSGSWWEEDRS +    V
Sbjct:   26 DGIGHGRGLDGWSAHVRYFLARYPPETRDLVAQRLASYGIRSLLSSHRQENLSLDALLAATDAADREVLSSMREHARGRHKQRG----AAAPLC--RSRTSSPQRQQRQHPRANGGNAAAPTEVLRERVLADKNIDAGPP---------GAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGXXXXXXXXXXXXARGAKRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGAEAGGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPED-VAAXXXXXXXXXXXXXXXXXXXXAGPSRKPATVAATAAPFGMEFQQPVWKPVGGRRGSVAXXXXXXXXXXXXXXRFLRGGEAENVTSAESFLGGLEADSRSDTTGWGGFSAA----SRISASDGDGGPYPGEGXXXXXXXXXEALRAWEEA-EDWVGAGRSIARAPGEEQEEHARGEAGGLFAAPRGLGAVHGSRRRRKQSGGAGDAGRIAG---------ARRSAVRDTVARRRLDRLDRGSSLGDATQGFPADGRSGVSGDGDRDRGGSSLAAEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDWFDGEDGDQISAGSSAAWEPEGAVRGPLGGGPRQTHRPGGALRGRYDSGGGGGSRSRNGLSRR-DGGQ---RAGRREAHTGWLGDFGPVHTHTVREVAGDVEEEEEXXXXXXXXXXGDGRAWGTASR------RDGGVSPPRDHGGSDGGTTSRQGSGGHAEEKGRGGVGEGGSGDVSASEDVREGRGVDESTGAARGSDGGGATREGSDPGGGGSTSPNXXXXXDVG---------LGQGETGDFNVVAPLDGGLDAYLQLASDGGAXXXXXXXXXXXXXXXGGREGPGLGGGSPGGYTGA---------------TSGSWWEEDRSALEGGDV 955          
BLAST of mRNA_C-linearis_contig112.1550.1 vs. uniprot
Match: A0A6H5JP21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP21_9PHAE)

HSP 1 Score: 610 bits (1572), Expect = 5.750e-200
Identity = 513/1073 (47.81%), Postives = 578/1073 (53.87%), Query Frame = 0
Query:   21 ASRHHHQH-----DGNGHA-GTNGWSAHVRYFLARYPLEARDFVAQRLAAYGIRSLLSSHRMENLTLDTLLSATDAADRDVLSLMRQHARGRREQRGGLHRSAAPASPRRSRVGVPSPQRRHQPHAIDDSSQ--APREALRERGIT-RNTNATPPSRMASALRPGAAGS----RKRHEIVGRPDVLTRYPFVDDLGNKQGGGVGAVMHRATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTAKGGXXXXXXXXXXVRAMGRSGKDVHLVMALARECLPPTLAHAARDTSTLSSASTQRGAEEGWARDGQNMFISERRWIKIVAHVIRRLWDMDGPPSSFLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPLGMDFQQPVWRPVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLTADXXXXXXXXXXXXXXXXXPSAISADDVDGDYY-GRGGGGEGEDEAGEALRAWEEEGESWVGAGRSLAWAPPGEED-----------------GEV-------------GGVG----------------EDGS----------------SQGAGEGRL----------AXXXXXXXXXXXXXXXXXXXXXXXXXARRSAVKDVVARRRLGHLETGGXXXX-----------------RKD------SSASDCNSQPRGHTPGEHALDIAGAFLESSLMTRLAGGDWFDSEDGEPTSSFSSA-WETEEAVRVPPGXXXXXXXXXXXXXXXXXXX--------RNESPRREDGGHGVPATRRRQAYTGWLGDFGPVHTHTVREVAGTGDEEEEDGRXXXXXXXXXXXXX----RDRG-SGPRPAGQEEEDGKERTRRSWRLDEGGAPS-GGGDVVERSEG----------------TEKDGGVDESTAAVDSVAPRVGGADATLPGAADSSSDIPETGADDGNDSNDEVENMGTAETGDVNVVAPLDGGLDAYLQLASDSGALHRGGGGRLGRGDGGGTAXXXXXXXXXXXXXXXXXXXXXTSGSWWEEDRSEVSTSPV 953
            ASR+H  H     DG GH  G +GWSAHVRYFLARYP E RD VAQRLA+YGIRSLLSSHR ENL+L+ LL+ATDAADR+VLS MR+HARGR++QRG    S       RSR+   S QR+ + H+ D+     AP E LRER +  +N +A+PP+         AAG+    RKRH +  RPDVLTRYPFVDDL   QGGGVGAVMH+ATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLT+KGG   XXXXXXX     RS KDVHLVMALARECLPPTLAHAARDTSTLS+ASTQ G+E GW RDGQNMF+SERRWIK+VAHVIRRLWDMDG P   +AA XXXXXXXXXXXXXXXXX               A P GM+FQQPVW+  GG                                    GGL  D                  S ISA D DG  Y G G GG+ +    EALRAWEE  E WVGAGRS+A AP  E++                 G V             GG G                ++G+                S   G GR           A                         ARRSAV+D VARRRL  L+ GG                      KD      S A++ +S  RGHTPGEHALDIAGAFLESSLMTRLAGGDWFD ED E  S+ SSA WE E AVRVP G                           RN   RR+DG        RR+A+TGWLGDFGP HTHTVREVAG  +EEEE+GR XXXXX           RD G S PR  G     G + +  S ++ EG A   GGG    R++G                  +  GVDEST A        GG D T  G+  +      T     N+++D    +G AE GD NVVAPLDGGLDAYLQL SD  A+                 XXXX       XX        TSGSWWEEDRS +    V
Sbjct:   23 ASRNHGYHNGGGFDGVGHGRGLDGWSAHVRYFLARYPPETRDVVAQRLASYGIRSLLSSHRQENLSLEALLAATDAADREVLSSMREHARGRQKQRGAAALS-------RSRMS--SAQRQQRQHSRDNGGNGAAPTEVLRERVLADKNIDASPPA---------AAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGGGSRXXXXXXXXXGANRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGSEAGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPED-VAAXXXXXXXXXXXXXXXXXXAAAGPSRKPAAVPATAAPFGMEFQQPVWKRGGGGRYLRVTRADSFV-----------------------GGLEEDSRSDTTRWGGFSET----SRISASDGDGGPYPGEGVGGDDD----EALRAWEEA-EDWVGAGRSIARAPGEEQEDYAQEEAGDLFAAARGLGAVHGSSRRRTQSAGAGGAGXXXXXXXXXXXSGADWKEGTRPAGMWEVSPPAHVVASSRTGRGRRGQGARRESGPAYLRGVQSRIRPQLDAHKDRLRKIAGARRSAVRDTVARRRLDRLDRGGNPGDVTQGFPADGRSGVSGDRDKDRDRGGYSLATEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDWFDGEDSEQISAGSSAAWEPEGAVRVPLGGGLRQTNHPGGALRGRYDSGGGGGSRSRNGLSRRDDG----QRAGRREAHTGWLGDFGPAHTHTVREVAGDVEEEEEEGRGXXXXXGDGRAWGTASRRDGGVSPPRDRG-----GSDGSTTSRQVSEGPAEEKGGGGKGGRADGGVGGXXXRGEXXXXXXXREXXGVDESTGAARGSD---GGGD-TQEGSGSNGRGNTST-----NENDDADIGLGQAEMGDFNVVAPLDGGLDAYLQLVSDGRAVAGXXXXXXXX-----XXXXXXREGPALGXXSPGGYTGATSGSWWEEDRSALEGGDV 1021          
BLAST of mRNA_C-linearis_contig112.1550.1 vs. uniprot
Match: A0A835Z222_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z222_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.110e-27
Identity = 108/355 (30.42%), Postives = 159/355 (44.79%), Query Frame = 0
Query:   43 VRYFLARYPLEARDFVAQRLAAYGIRSLLSSHRMENL--TLDTLLSATDAADRDVLSLMRQHARGRREQRGGLHRSAAPASPRRSRVGVPSPQRRHQPHAIDDSSQAPREALRERGITRNTNATPPSRMASALRPGAAGSRKRHEIVGRPDVLTRYPFVDDLGNKQGGGVGAVMHRATPTTPIQYLAKREIRRLAHEAFRELKASALGIRLS--------------DLPCALQFLFFGDSASLLTAKGGXXXXXXXXXXVRAMGRSGKDVHLVMALARECLPPTLAHAARDTSTLSSASTQRGAEE---GWARDG--------------QNMFISERRWIKIVAHVIRRLWDMDG 364
            +R+ LA++P E +  + + LA +G+R LL +HR+++L      +L+AT+AA R+V +++R+H+            +  P    R++      +RR                      TR+ + T P    S ++    GSR+    + RPDVL +YPFVD  GN     VG ++     TTP   LAKREIRRLA  AF E ++SA GIRL               D  C        D  S L+A  G            A   +   +HL++ALA+E LP +L    RDTS L   ST         G   D                +  + +  W ++VAHV+RRLW M+G
Sbjct:   12 LRHVLAKFPREQKTVIEECLAWHGLRVLLQAHRLDDLLGNASAVLAATEAARREVHAILREHS------------TRGPRPTARTKAATAVAKRR----------------------TRSASPTTPRLPRSPVKGTLRGSRQPD--IPRPDVLAKYPFVDGQGN-----VGEILACPPRTTPFHRLAKREIRRLAKAAFMEYRSSAHGIRLHAPPQIAPTGITPLFDARCRTSTPRLRDFKSALSALFG-----------EATYSACGGMHLILALAQEALPHSLQLVLRDTSDLGDVSTAPSVATFGMGLTEDNIEVPGNTHPVKVPRNDAAVDQSEWTRLVAHVVRRLWQMEG 314          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVT4_ECTSI1.690e-21652.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP21_9PHAE5.750e-20047.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z222_9STRA3.110e-2730.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:420410..427479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1550.1mRNA_C-linearis_contig112.1550.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 420410..427479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1550.1 ID=prot_C-linearis_contig112.1550.1|Name=mRNA_C-linearis_contig112.1550.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=954bp
MEAARRPSTAARVRKQPKIGASRHHHQHDGNGHAGTNGWSAHVRYFLARY
PLEARDFVAQRLAAYGIRSLLSSHRMENLTLDTLLSATDAADRDVLSLMR
QHARGRREQRGGLHRSAAPASPRRSRVGVPSPQRRHQPHAIDDSSQAPRE
ALRERGITRNTNATPPSRMASALRPGAAGSRKRHEIVGRPDVLTRYPFVD
DLGNKQGGGVGAVMHRATPTTPIQYLAKREIRRLAHEAFRELKASALGIR
LSDLPCALQFLFFGDSASLLTAKGGGAGDGGGGGGVRAMGRSGKDVHLVM
ALARECLPPTLAHAARDTSTLSSASTQRGAEEGWARDGQNMFISERRWIK
IVAHVIRRLWDMDGPPSSFLAARARRQQSAAAAAAAAATANGLPPNAAVT
SAAAAAGPLGMDFQQPVWRPVGGGNGRRVAAAAAAAAAAAERFLGDGGGE
EEENTGSFLGGLTADSRSDSAGGGWGGGSAAAPSAISADDVDGDYYGRGG
GGEGEDEAGEALRAWEEEGESWVGAGRSLAWAPPGEEDGEVGGVGEDGSS
QGAGEGRLAAAGRRRRRRRAGRGAKGRRRARIAGARRSAVKDVVARRRLG
HLETGGGGGGRKDSSASDCNSQPRGHTPGEHALDIAGAFLESSLMTRLAG
GDWFDSEDGEPTSSFSSAWETEEAVRVPPGGRRRQNRVAGGPPTGRRGGR
NESPRREDGGHGVPATRRRQAYTGWLGDFGPVHTHTVREVAGTGDEEEED
GRSGRDGSGGGGSDGRDRGSGPRPAGQEEEDGKERTRRSWRLDEGGAPSG
GGDVVERSEGTEKDGGVDESTAAVDSVAPRVGGADATLPGAADSSSDIPE
TGADDGNDSNDEVENMGTAETGDVNVVAPLDGGLDAYLQLASDSGALHRG
GGGRLGRGDGGGTAGGAGLGAGAGGGGSPGAYTGATSGSWWEEDRSEVST
SPV*
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