prot_C-linearis_contig111.1501.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1501.1
Unique Nameprot_C-linearis_contig111.1501.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length231
Homology
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BLAST of mRNA_C-linearis_contig111.1501.1 vs. uniprot
Match: D7G507_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G507_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 3.670e-135
Identity = 207/233 (88.84%), Postives = 213/233 (91.42%), Query Frame = 0 
Query:    1 MFQSAPVGKKEAAAKFKAEAGCNQAPKNMDDI--RDAGDVLDAVLTEDSTKVPVKEGVDVFFDPEKFKEKKTLDVFMKTFPYDAGELGVREGTEILVGSSKGKVVNTKHDRVMIEVGGRRLDVSVLFVLEHAVGGQAVTTVEEAQRKFVLFLHQVVSIPDFFIPNHYRIEGKASCAQSRYTTDAEAEIAKLQLKQRVKPTPERQGNITRLQKRLDAMTKIKPMIWRVLRKISV 231
            MF+ APVGKKEAAAKFKAEA  NQAPKNM DI  RDA DVLDAVLT+DSTKVPVKEGVDVFFDPEKF EKKTLDVFMKTFPYDA ELGVRE TEILVGSSKGKVVNTKHDR MIEVGGR L VSVLFVL+HAVGGQ VTTVE AQRKFVLFL QV++IP+FFIPNHYRIEGKASCAQSRYTTDAEAEIAKLQLKQRVKPTPERQG ITR QKRLD M KIKPMIWRVLRKISV
Sbjct:    1 MFKRAPVGKKEAAAKFKAEAAGNQAPKNMGDITLRDACDVLDAVLTDDSTKVPVKEGVDVFFDPEKFNEKKTLDVFMKTFPYDAVELGVRERTEILVGSSKGKVVNTKHDRAMIEVGGRSLAVSVLFVLQHAVGGQLVTTVEAAQRKFVLFLQQVIAIPEFFIPNHYRIEGKASCAQSRYTTDAEAEIAKLQLKQRVKPTPERQGKITRFQKRLDGMIKIKPMIWRVLRKISV 233
[Close]
BLAST of mRNA_C-linearis_contig111.1501.1 vs. uniprot
Match: D7G685_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G685_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.390e-84
Identity = 140/157 (89.17%), Postives = 146/157 (92.99%), Query Frame = 0 
Query:   75 MKTFPYDAGELGVREGTEILVGSSKGKVVNTKHDRVMIEVGGRRLDVSVLFVLEHAVGGQAVTTVEEAQRKFVLFLHQVVSIPDFFIPNHYRIEGKASCAQSRYTTDAEAEIAKLQLKQRVKPTPERQGNITRLQKRLDAMTKIKPMIWRVLRKISV 231
            MKTFPYDAGELGVREGTEILVGSS+GKVVNTKHDR MIEVGGR LDVSVLFVLEHAV  Q V TVE AQRKF+LFLHQVV+IPDFF+PNHYRIEGKASCAQSR+TTDAEAEIAKLQLKQRVKPT ERQG ITRLQKRLD MTKI+PMIWRVLR ISV
Sbjct:    1 MKTFPYDAGELGVREGTEILVGSSRGKVVNTKHDRAMIEVGGRTLDVSVLFVLEHAVREQGVATVEAAQRKFLLFLHQVVAIPDFFVPNHYRIEGKASCAQSRFTTDAEAEIAKLQLKQRVKPTAERQGKITRLQKRLDGMTKIRPMIWRVLRVISV 157
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G507_ECTSI3.670e-13588.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G685_ECTSI1.390e-8489.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:360280..360972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1501.1mRNA_C-linearis_contig111.1501.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 360280..360972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1501.1 ID=prot_C-linearis_contig111.1501.1|Name=mRNA_C-linearis_contig111.1501.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
MFQSAPVGKKEAAAKFKAEAGCNQAPKNMDDIRDAGDVLDAVLTEDSTKV
PVKEGVDVFFDPEKFKEKKTLDVFMKTFPYDAGELGVREGTEILVGSSKG
KVVNTKHDRVMIEVGGRRLDVSVLFVLEHAVGGQAVTTVEEAQRKFVLFL
HQVVSIPDFFIPNHYRIEGKASCAQSRYTTDAEAEIAKLQLKQRVKPTPE
RQGNITRLQKRLDAMTKIKPMIWRVLRKISV
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