prot_C-linearis_contig110.1432.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: D7G0V3_ECTSI (Protein with LSm motif. Putative LSm11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V3_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 3.610e-124 Identity = 340/726 (46.83%), Postives = 386/726 (53.17%), Query Frame = 0
Query: 1 MEELRKSLWSRLVVFYSVNKRDQLNPEVMAEIVAKYGSKEKELSARLLKKYRRPLPPSVPAQDLRRVLLEFGMEDQDVATA------------------AAAAAAVGRTSDERARRNPAGAARLEGQAGQGEGQAKRPPRGGELNFRSKFFDPLQALNHETLRPPFPRERALDNLAKFARMMPKRAAAAG-TATAGGAV------------------AGADANVLSPTSS-----TPKNPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGESGVGGSIGGHYGPPVGSAEELDRIDKDMASKRRNAELLLAGGA-AGPAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAFVPDRDPKPKRQERRPQGAPSPNPLQGGGMGVEEEGDGLRGKPAEVRDTGSARGLSAGVGGEDGEGGWGTAGSLRXXXXXXXXXXXXXGGV------------EEVVRLSRPHGTAADGRKSAFGAEELDAGGGGGGDAFRGVVGGDRGAVAPAADSSGAR--VESVTVESAGARDEVASSHVGETQLFAETTGGLGSGQPLGAFLSEEGKVGDRGQG--ARRVIRIGEVQP----PPPGEEGSSDSNRVGGQGQHGSFGQPPVEGRGSGLQDDGASGATDV-KKKSNRRSRGRGPWTGKLVPVRRRRFLKQLMIRGDNVVMVWESSK 662
M E R SLWSRLVVFYSVNKRDQLN +VMAEIVAKYGSKEKELSARLLKKY RPLPPSV +QDLRRVLLEFGMED+D+A + AAA G A R P AR + G+GEG A P+G ELNFRSKFFDPLQAL H+TLRPPFP+E ALDNLAKF RM+PK A+ G TATAGG +G D P S P N A GG + Y P V SA +++R DKDMAS+RR AE LAG A A PA EERFNPV+RI++EYAG GPYSLLYRLHE+ RRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDV+E+YTAFVP R P+P P PSP P EEE R A + TG GL G XXXXXXXXXXXX G V E+ V +S G+ + A A + GG G RG V GD G + D R V +V S A +E S E GG + E G +R + RR E +P PP G +G D NR EGRG G G A +V KKKS RRSR +GPWTG+ PV RRR+LKQL+IRGDNVVM+WE+ K
Sbjct: 1 MGEPRTSLWSRLVVFYSVNKRDQLNAKVMAEIVAKYGSKEKELSARLLKKYSRPLPPSVASQDLRRVLLEFGMEDEDLARGKPSDPDRRASPLSPTGAMSTAAAGAGXXXXXXAGREPT--ARDNEKLGRGEG-AGSSPKGDELNFRSKFFDPLQALLHKTLRPPFPKEPALDNLAKFYRMLPKPHASTGPTATAGGXXXXXXXXXXXXXXXAADSRSGVDYFGAGPRSGGAGVIPPPNAAGSPRGSHQARETWPTSG---------------------GGRV--RYSPLVRSAADMERADKDMASRRRLAEGALAGDAEADPADFAEERFNPVKRIVQEYAGSGPYSLLYRLHEENRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVRENYTAFVPARGPRP------PPKQPSPKP-------AEEEDPIDRDAAAASKVTGF-EGL-----GXXXXXXXXXXXXXXXXXXXXXXXXXXLGKVTGXXXXXXAADDEKFVGISPADGS----EQRAATAWSVTGTGGFKGGRIRGEVAGDAGGRSERIDPRDRRMPVAAVAAASGAATEEACSDETRE--------GGARTATRTKLLPQEWGVTPEREEKDPTRRTPDAEEQRPRPPLPPAGRQGG-DVNRG--------------EGRGGGAT--GEIPAAEVRKKKSTRRSRSKGPWTGERKPVARRRYLKQLLIRGDNVVMIWEAPK 652
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A6H5LBR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBR8_9PHAE) HSP 1 Score: 372 bits (956), Expect = 9.210e-117 Identity = 318/700 (45.43%), Postives = 371/700 (53.00%), Query Frame = 0
Query: 1 MEELRKSLWSRLVVFYSVNKRDQLNPEVMAEIVAKYGSKEKELSARLLKKYRRPLPPSVPAQDLRRVLLEFGMEDQDVATA--------AAAAAAVGRTSDERARRNPAG--------AARLEGQAGQGEGQAKRPPRGGELNFRSKFFDPLQALNHETLRPPFPRERALDNLAKFARMMPKRAAAAG-TATAGGAVAGADANVLSPTSSTPKNPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGESGVGGSIGGHYGPPVGSAEELDRIDKDMASKRRNAELLLAGGAAGPAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAFVPDRDPKPKRQERRPQGAPSPNPLQGGGMGVEEEGDGLRGKPAEVRDTGSARGLSAGVGGEDGEGGWGTAGSLRXXXXXXXXXXXXXG--GVEEVVRLSRPHGTAAD----GRKSAFGAEELDAG-------GGGGGDAFRGVVGGDRGAVAPAADSSGARVE--SVTVESAGARDEVASSHVGETQLFAETTGGLGSGQPLGAFLSEEGKVGDRGQG--ARRVIRIGEVQPPPP----GEEGSSDSNRVGGQGQHGSFGQPPVEGRGSGLQDDGASGATDVKKKSNRRSRGRGPWTGKLVPVRRRRFLKQLMIRGDNVVMVWESSK 662
M E R SLWSRLVVFYSVNKRDQLNP+VMAEIVAKYGSKEKELSARLLKKY RPLP SV +QDLRRVLLEFGMED+D+A ++ + +G S A AG AAR + G+GEG A P G ELNFRSKFFDPLQAL H+TLRPPFPRE ALDNLAKF RM+PK + G ATAG + + G G +G V SA +++R DKDMA +RR AE LAG A RFNPV+RI++EYAG GPYSLLYRLHE+ RRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDV+E+YTAFVP R P+P P P P KPAE ++ V G +G G XXXXXXXXXXXXXG G+ +V + G A D G A G+E A GG G G GGD G + R++ + S A +E S E GG + + E G +R + R E +P PP G G D NR GG G+ G+ G+ P A KKKS RRSR +GPWTG+L PV RRR+LKQL+IRGDNVVM+WE+ K
Sbjct: 1 MGEPRTSLWSRLVVFYSVNKRDQLNPKVMAEIVAKYGSKEKELSARLLKKYGRPLPASVASQDLRRVLLEFGMEDEDLARGKPSDPDRRSSPLSPIGTMSTTVAGAGSAGTGVAGREAAARENKELGRGEG-AGSSPTGDELNFRSKFFDPLQALLHKTLRPPFPREPALDNLAKFYRMLPKPPTSTGPAATAGXXXXXXXXXXXXXXXXXADSRSGVSYFGSGHRGGGAGVVPPPAAAGSPRGSHQARKTWPASGGGRGRHGLLVRSAADMERADKDMALRRRLAEGALAGDAETDPADSAGRFNPVKRIVQEYAGSGPYSLLYRLHEENRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVRENYTAFVPARGPRP------PPKLPPP-------------------KPAEEDPIDRDAAAASKVTGFEGLGXXXXXXXXXXXXXXXXXXXXXXGPEGLGKVTAGAGXAGAADDDKSVGVSPADGSEPTGATAWTVTGTGGFKGGRISGEDGGDGGGSSERIYPRDPRMDVAAAAAASGAATEEACSDETRE--------GGARTATRMKLLPQEWGVPREREENDPTGRTPDAEEKRPRPPLSTAGRHGG-DVNRGGG-GEGGATGEIPA--------------AEVRKKKSTRRSRSKGPWTGELKPVARRRYLKQLLIRGDNVVMIWEAPK 650
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A836CP56_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP56_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.210e-12 Identity = 90/345 (26.09%), Postives = 136/345 (39.42%), Query Frame = 0
Query: 29 MAEIVAKYGSKEKELSARLLKKYRRPLPPSVPAQDLRRVLLEFGMEDQDVATAAAAAAAVGRTSDERARRNP----------------AGAARLEGQAGQGEGQAKRPPRGGELNFRSKFFDPLQALNHETLRPPFPRERALDNLAKFARMMPKRAAAAGTATAGGAVAGADANVLSPTSSTPKNPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGESGVGGSIGGHYGPPVGSAEELDRIDKDMASKRRNAELLLAGGAAGPAVPDEERFNPVQRIMREYAGK---GPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYT 354
+ +I AK+G ++++LSA+L KKY++PLP +V +R + L FG+ D + A AA A A +A L G Q Q R +LNFRS+ F+ L AL + + P P + LDN+ KF ++P D V P + G+A++ + M S A+ A ++ +P+ +M+ G GP S L R+ + RR VMIR VNS+RG C GL++AFD+H N+++VDV E YT
Sbjct: 3 LLQIEAKFGQRQEQLSAKLAKKYQQPLPAAVTDAAVRDICLRFGLNDPEEAGAADAXXXXXXXXXXXXXXXXXXXXXXXXXXPPHAVTASSASL-GVPSQQADQQHRHVADEQLNFRSRHFNALFALQADGVVLPVPNAQPLDNITKFRPLLPADHP--------------DRTVTRPPKAQ------------------------------------------------------SGTAQQ-----RHMRSAAAEAQPTAHERQASTQQ-HMQQADPLALVMQVALGPQGTGPMSFLGRMWRENRRVCVMIRYVNSVRGVCAGLLKAFDKHFNMVIVDVTERYT 272
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A662WXN3_9STRA (Sm domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXN3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.890e-9 Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 302 GPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAFV 357
GP+ +L R ++ R V++RRVNS+RGTCTG ++AFD+HMNL+L+DV ++Y
Sbjct: 84 GPFMVLRRCFLERTRVLVVVRRVNSVRGTCTGFLKAFDKHMNLVLLDVSQEYVPLT 139
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A2P4XRX7_9STRA (Sm domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRX7_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.630e-9 Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 0
Query: 248 PVGSAEELDRIDKDM----ASKRRNAELLLAGGAAGPAVPDEERFNPVQ----------RIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAF 356
PV +A LD I K S L++ AGP+ + + + ++ + GP+ +L R ++ R V++RRVNS+RGTC+G ++AFD+HMNL+L+DV D+ F
Sbjct: 119 PVTTAYPLDNIQKCRHLLPESDVNRQTLIVRSKKAGPSAAEAKAATAKKAPTLSTPSLFEVLADTYLDGPFRVLRRCFLERTRVFVVVRRVNSVRGTCSGFLKAFDKHMNLVLLDVTHDFIPF 241
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: F0XVT2_AURAN (Sm domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVT2_AURAN) HSP 1 Score: 70.1 bits (170), Expect = 9.630e-9 Identity = 46/112 (41.07%), Postives = 59/112 (52.68%), Query Frame = 0
Query: 251 SAEELDRIDKDMASKRRNAELLLAGGAAGPAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAFVPDRDP 362
SA R + D A+ R AELL AV D R GP+ +L+R D+ V++RRVN IRG+C GL++AFDRHMNL+LVD E T P R+P
Sbjct: 123 SAHHAPRPEPDAAASSRGAELL-------EAVTDPLR-------------DGPHGVLWRALRDRAAVKVVLRRVNCIRGSCVGLLKAFDRHMNLVLVDAAE--TTVPPMRNP 212
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A5D6YBS7_9STRA (Sm domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBS7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.800e-8 Identity = 30/52 (57.69%), Postives = 42/52 (80.77%), Query Frame = 0
Query: 302 GPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDY 353
GP+++L R ++RR V++RRVNSIRGTC G ++AFD+HMNL+L+DV E Y
Sbjct: 192 GPFTVLRRCFLERRRVVVVVRRVNSIRGTCAGYLKAFDKHMNLVLLDVDERY 243
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A1V9YMI3_9STRA (Sm domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMI3_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.230e-8 Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 0
Query: 277 AAGPAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYTAFVPDRDP 362
A P V + P+ + + GP ++L + + + + V+IRRVNSIRGTCTG ++ FD+H N++L+DV E Y V P
Sbjct: 142 AVAPKVAPAPQRPPLLETIADLCADGPLNILRAILKARAKVCVVIRRVNSIRGTCTGYLKGFDKHFNIILLDVTERYVPLVSGEQP 227
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: A0A7S4A1D1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1D1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.330e-8 Identity = 42/115 (36.52%), Postives = 58/115 (50.43%), Query Frame = 0
Query: 247 PPVGSAEELDRIDKDMASKRRNAELLLAGGAAG-------PAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDYT 354
PPV +A LD + K ++E G P+ R + + + +GP+SLL+R D+ R V +RR+NSIRG G ++AFDRHMNLLLVD E T
Sbjct: 79 PPVPNAPPLDNLSKFRPFLPHSSEYHDTRVKQGAHHVVREPSATSTNRGVALLSQVTDTLREGPHSLLWRALRDRVRVRVTLRRINSIRGVVVGHLKAFDRHMNLLLVDAAETTT 193
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Match: V9F378_PHYPR (Sm domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9F378_PHYPR) HSP 1 Score: 66.2 bits (160), Expect = 4.860e-8 Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0
Query: 248 PVGSAEELDRIDK------DMASKRR--------------NAELLLAGGAAGPAVPDEERFNPVQRIMREYAGKGPYSLLYRLHEDKRRASVMIRRVNSIRGTCTGLIRAFDRHMNLLLVDVQEDY 353
PV +A LD I K ++ R+ +A+ + A PA P + +++ Y +GP+ +L R ++ R V+IRRVNS+RGTC+G ++AFD+HMNL+L+DV +D+
Sbjct: 115 PVATAHPLDNIQKCRHLLPELDVNRQTLVVRPKKPSPSAADAKAAVVKKAPAPATP-----SLFEQLADTYL-EGPFRVLRRCFLERMRVFVVIRRVNSVRGTCSGFLKAFDKHMNLVLLDVTQDF 234 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig110.1432.1 ID=prot_C-linearis_contig110.1432.1|Name=mRNA_C-linearis_contig110.1432.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=664bpback to top |