prot_C-linearis_contig11.1417.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1417.1
Unique Nameprot_C-linearis_contig11.1417.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length96
Homology
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A7S2CQY2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQY2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.230e-23
Identity = 41/85 (48.24%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    9 SLVRTVAEEGEFSWEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQFLEANLDKFADRVQALLPKDSPVNL 93
            +LV+ +  E E +W++ +  S   LLV+DCHQDWCG+CETLQPTF RI ++  + E+R  FL AN+  F D+++A+LP+DS ++L
Sbjct:    7 NLVKVI--ETEEAWDEWMGKSGDMLLVLDCHQDWCGQCETLQPTFLRIFMDNDEPESRLAFLSANIKVFKDKIKAILPEDSQISL 89          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A835YJ53_9STRA (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ53_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.570e-21
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   22 WEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQFLEANLDKFADRVQALLPKDS 89
            W K LA+S +KL+VID HQDWCG CETLQPT  RIAL+TTD  NRC F  A++ K   +V  LL  D+
Sbjct:    1 WSKVLASSKEKLIVIDIHQDWCGPCETLQPTMHRIALDTTDCANRCGFFSASMGKLKAQVGELLSADA 68          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A4Q6B0Z1_9SPHI (Thioredoxin domain-containing protein n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q6B0Z1_9SPHI)

HSP 1 Score: 73.6 bits (179), Expect = 3.620e-14
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   17 EGEFSWEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQFLEANLDKFADRVQALLPKDSPVNL 93
            E E  WE  +  S  KL+VIDCHQ+WCG CE + P+  R+ L+  + + R  +  A++ K   ++QA LP+D+ ++L
Sbjct:   83 EDEQQWESVVEQSESKLVVIDCHQEWCGNCEAILPSMTRVLLDYDNIDERFVYATASIGKVGAQIQAALPQDAHISL 159          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A7S1CA45_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA45_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.320e-9
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   10 LVRTVAEEGEFSWEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQFLEANLDKFADRVQALLP 86
            LV+ +    +F  +K +  S   L+VID H+ WCGRCE +QPTF+R+ L+  +++ R +FL  +    +D  +  LP
Sbjct:   10 LVKPIESAEDF--QKWVDQSDHILVVIDVHKKWCGRCEVMQPTFERLFLDNDEADKRVKFLSLDDSVLSDEQKEALP 84          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A1V9YNZ1_9STRA (Thioredoxin/dynein outer arm protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNZ1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.790e-9
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   22 WEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQF 69
            W      ST+KL+VID +Q+WCG C+ L+PT++RI  +T+ +E+R QF
Sbjct:   18 WNHLRENSTEKLIVIDMYQEWCGPCKVLEPTYRRIIADTSSAESRLQF 65          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A067CEY6_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEY6_SAPPC)

HSP 1 Score: 57.0 bits (136), Expect = 2.800e-8
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   22 WEKCLAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQF 69
            W      +T+KL+VID +Q+WCG C+ L+PT++RI  +T  +E R QF
Sbjct:   18 WNHLRENATEKLIVIDMYQEWCGPCKVLEPTYRRIIGDTASAETRLQF 65          
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Match: A0A8J2SPW4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPW4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.460e-5
Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 0
Query:   26 LAASTQKLLVIDCHQDWCGRCETLQPTFQRIALETTDSENRCQFLEANLDKFADR-VQALLPKDSPVNLA 94
            L  S   L+V+D HQ+WCG C+T++PT+  I  E  + E++  F  A++     + V+ +  K S ++LA
Sbjct:   19 LEKSETVLVVMDVHQNWCGPCDTMKPTYNSIFNEIDNCEDKVAFTTADIKTLTPQLVELMATKPSDLDLA 88          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A7S2CQY2_9STRA6.230e-2348.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YJ53_9STRA7.570e-2158.82Thioredoxin domain-containing protein (Fragment) n... [more]
A0A4Q6B0Z1_9SPHI3.620e-1438.96Thioredoxin domain-containing protein n=1 Tax=Sphi... [more]
A0A7S1CA45_9STRA1.320e-936.36Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1V9YNZ1_9STRA1.790e-947.92Thioredoxin/dynein outer arm protein n=1 Tax=Achly... [more]
A0A067CEY6_SAPPC2.800e-845.83Thioredoxin domain-containing protein n=2 Tax=Sapr... [more]
A0A8J2SPW4_9STRA1.460e-534.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 21..81
e-value: 1.3E-7
score: 31.5
NoneNo IPR availableGENE3D3.40.30.10coord: 4..85
e-value: 7.6E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR10438:SF403coord: 13..83
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 13..83
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3654038..3655311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1417.1mRNA_C-linearis_contig11.1417.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3654038..3655380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1417.1 ID=prot_C-linearis_contig11.1417.1|Name=mRNA_C-linearis_contig11.1417.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=96bp
MAPAAVDNSLVRTVAEEGEFSWEKCLAASTQKLLVIDCHQDWCGRCETLQ
PTFQRIALETTDSENRCQFLEANLDKFADRVQALLPKDSPVNLATQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf