prot_C-linearis_contig11.1416.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1416.1
Unique Nameprot_C-linearis_contig11.1416.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length310
Homology
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: D8LKH1_ECTSI (Uracil-DNA glycosylase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH1_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 2.070e-163
Identity = 236/299 (78.93%), Postives = 258/299 (86.29%), Query Frame = 0
Query:   19 ADPGSNKSSTSTRTTKKQRKPKAQD---------STLVASGDELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVRWEKAACLDELVLKSSKSKEIDQFL 308
            AD  +  SS S+R TK+ R+ KA+          STLV+ GDELVRISRRLHD LK + W+GTSKQPV+CSY+VLEYASETNEAYT+RYGGGRP GRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWL V+G VGRP KEH KRPV GFDC+RSEVSGTRLWGFFERRFGTAD WGD MFVYN+CPLTFMSSSG NITPDKLTPAEREVIDEACG+ALA+M+SALKPSVVV VGNFAG+KC EAVKASGL A   +  VEVVVVNHPSPASPTGV+WEKA CL+ELVL SSKSKEID+FL
Sbjct:   19 ADRKAGDSSCSSRATKQGRRLKAEGGSAGAEAGGSTLVSCGDELVRISRRLHDSLKDRKWKGTSKQPVSCSYNVLEYASETNEAYTQRYGGGRPFGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLKVQGAVGRPSKEHTKRPVHGFDCQRSEVSGTRLWGFFERRFGTADAWGDKMFVYNFCPLTFMSSSGGNITPDKLTPAEREVIDEACGEALAEMISALKPSVVVAVGNFAGSKCHEAVKASGLNAA-GKGEVEVVVVNHPSPASPTGVKWEKATCLNELVLNSSKSKEIDRFL 316          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A2D9TGN5_9DELT (Single-stranded DNA-binding protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TGN5_9DELT)

HSP 1 Score: 218 bits (556), Expect = 5.530e-67
Identity = 113/244 (46.31%), Postives = 154/244 (63.11%), Query Frame = 0
Query:   47 VASGDELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            +A   +L  I+ RL DRL   ++     +PVT  YD   YA   +  Y +R+G GR       +GMNPGPWGM QTGVPFGEV + RDW+GV+G +G+P  EH KRP++GF+C RSEVSG RLWG+ E+RFGTA+ + +  +V NYCPL FM  S  N  P+KL  AER+ + +AC +AL +++ AL+P +VVGVG +A  +   A+          + GV +  V HPSPASP   R W++ A
Sbjct:    1 MAPRSKLSAIADRLSDRLAELSFA----EPVTHVYDPTRYARAAHHDYLKRFGRGRK--EVVFLGMNPGPWGMAQTGVPFGEVSYARDWMGVKGRIGKPEVEHPKRPIEGFECARSEVSGRRLWGWAEQRFGTAEAFFERFYVANYCPLVFMEESARNRVPEKLPVAERQPLLDACDEALVEVIEALQPELVVGVGAWARKRAEAAL---------GDLGVRIGQVLHPSPASPRANRGWQEQA 229          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A2A2QJU9_9BACT (Single-stranded DNA-binding protein n=1 Tax=Verrucomicrobiae bacterium Tous-C5FEB TaxID=1982331 RepID=A0A2A2QJU9_9BACT)

HSP 1 Score: 218 bits (554), Expect = 1.040e-66
Identity = 118/239 (49.37%), Postives = 152/239 (63.60%), Query Frame = 0
Query:   52 ELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            +L+  +RRL   L G  +       V C Y+ LEYA + +EAY  RYG G+   R   +GMNPGP+GM QTGVPFGEV  VRDWLG+  +V +P KEH KRP++GF CKRSEVSG RLWG F  RFG AD++    FV NYCPL +MS++G+N+TPDKL  +E + +++AC   LA ++  L PS ++GVG FA  + + A  A G       S   V  V HPSPASP   R W +AA
Sbjct:    3 KLIASTRRLVSDLAGLEFGDL----VACVYNPLEYAWQAHEAYLSRYGSGKK--RVLFLGMNPGPFGMAQTGVPFGEVDAVRDWLGICEDVEKPLKEHPKRPIEGFACKRSEVSGRRLWGLFAERFGKADSFFKEHFVMNYCPLVWMSTTGANLTPDKLPASEMQPVEQACLKHLAKVIELLDPSYLIGVGGFAEDRLIRAAAACG-------SKATVGRVLHPSPASPAANRGWAEAA 228          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A3N5VL41_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A3N5VL41_9BACT)

HSP 1 Score: 216 bits (549), Expect = 6.490e-66
Identity = 115/244 (47.13%), Postives = 153/244 (62.70%), Query Frame = 0
Query:   47 VASGDELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            +++  +L+  +RRL D L   T+      PV C Y  L+YA   ++ Y  RYG G    R   +GMNPGP+GM QTGVPFGEV  VRDWL +   V +P  EH KRPV+GF+C RSEVSG RLWG F  RFGTAD +  + FV NYCPL +MS++G+N+TPDKL  AE   +++AC   LA+++  LKPS ++G+G FA  + + A + SG       S   +  + HPSPASP   R W +AA
Sbjct:    1 MSAATDLIASTRRLCDALGDLTFAA----PVACVYRPLQYAWRPHQRYLERYGRGPK--RVVFLGMNPGPFGMAQTGVPFGEVAAVRDWLEIHEPVDKPAGEHPKRPVEGFNCTRSEVSGRRLWGLFAERFGTADAFFKDHFVLNYCPLVWMSATGANLTPDKLPAAEMAPVEDACLAHLAEVIGLLKPSFLIGIGGFAEQRLLRAAETSG-------SKAAIGRILHPSPASPAANRGWAEAA 231          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A3N5QI00_9GAMM (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5QI00_9GAMM)

HSP 1 Score: 214 bits (545), Expect = 2.220e-65
Identity = 113/237 (47.68%), Postives = 145/237 (61.18%), Query Frame = 0
Query:   53 LVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKA 288
            LV +SR L +R+    +      PV C Y+ LEYA   +E Y  RYGGG       ++GMNPGP+GM QTGVPFG+V  VRDWLG+   V RPR EH KRPV GFDC R+E+SGTRLWG+   RFGT   + +  FV NYCPL F+++SG+N+TPDKL  AE+  +  AC +AL  +V  L+P +V+GVG FA  +   A+    +  G          + HPSPASP   R W  A
Sbjct:    3 LVDVSRALSERVASLRFA----DPVCCVYNPLEYARAPHELYLSRYGGGPK--EVLLLGMNPGPFGMAQTGVPFGDVTMVRDWLGIVAPVARPRDEHPKRPVLGFDCHRTEISGTRLWGWARDRFGTPQRFFERFFVANYCPLAFVAASGANLTPDKLPAAEQRAVSSACDEALRAVVRLLRPQIVIGVGGFAERRARAALGGENIAIG---------TILHPSPASPLANRGWAGA 224          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A2W4L8P9_9PROT (Single-stranded DNA-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L8P9_9PROT)

HSP 1 Score: 213 bits (543), Expect = 4.450e-65
Identity = 110/205 (53.66%), Postives = 136/205 (66.34%), Query Frame = 0
Query:   76 PVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASP 280
            PVT  Y+ L+YA E +E Y  RYG GR    A  +GMNPGP+GM QTGVPFGEV  VRDWL + G+VG+P  EH KRPV GFDC RSEVSG+R+WG+    FGT + + +  FV NYCPL FM +SG N+TPDKL  AERE +  AC  AL  M+   +P  V+GVGNFA A+  EA++ +G+  G          + HPSPASP
Sbjct:   21 PVTHVYNPLQYAREPHERYLERYGQGRK--EAVFLGMNPGPFGMAQTGVPFGEVRIVRDWLKIEGKVGKPPVEHPKRPVQGFDCPRSEVSGSRIWGWVRDTFGTPERFFERFFVANYCPLVFMEASGRNLTPDKLPRAEREPLFAACDRALRRMMEIWQPRWVIGVGNFAEARAREALEGTGISVGR---------ILHPSPASP 214          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A831XLZ5_GEOME (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Geobacter TaxID=28231 RepID=A0A831XLZ5_GEOME)

HSP 1 Score: 213 bits (541), Expect = 9.190e-65
Identity = 121/238 (50.84%), Postives = 143/238 (60.08%), Query Frame = 0
Query:   53 LVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            LV I+  L   L G ++      PV C Y+ L YA E + AY  R+G   P     +VGMNPGPWGM QTGVPFGE+G V +WLGV G V RP  EH K+ VDGF C+RSEVSG RLWG    RFGT + +    FV NYCPL F++  G NITPDKL   E+E +  AC  AL   V  L+P VVVGVG FA  +C EA+  +GL        VEV  + HPSPASP   R W  AA
Sbjct:    4 LVNIADTLAADLAGLSF----STPVACVYNPLVYAREPHAAYLSRFGS--PPKEVLIVGMNPGPWGMAQTGVPFGEIGVVAEWLGVTGTVTRPADEHPKKRVDGFACRRSEVSGRRLWGLVRERFGTPERFFARFFVANYCPLLFLTVDGGNITPDKLRRGEQEPLFAACDRALRRTVDLLRPRVVVGVGGFAEGRCREAL--AGLN-------VEVGRIIHPSPASPAANRDWAGAA 226          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: UPI001B8AC5B4 (single-stranded DNA-binding protein n=1 Tax=Luteolibacter ambystomatis TaxID=2824561 RepID=UPI001B8AC5B4)

HSP 1 Score: 213 bits (541), Expect = 1.080e-64
Identity = 116/242 (47.93%), Postives = 154/242 (63.64%), Query Frame = 0
Query:   49 SGDELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            S   L+  SRRL   L G  +      PV+ +Y+ LEYA   +E Y  +YG G+   R   +GMNPGP+GM QTGVPFGE+  VRDW+G+   VG+P  EH KRP++GF C +SEVSG RLWG F  RFGTA+ +  + FV NYCPL +MSS+G+N+TPDKL+ AE E +++AC   LA+++  L+P  +VGVG FA  +   A   +G   G+ + G     V HPSPASP   R W +AA
Sbjct:    2 SAAALIDSSRRLESALHGARF----SPPVSHAYNPLEYARVPHELYLSKYGKGKK--RVLFLGMNPGPFGMAQTGVPFGEIAAVRDWMGIEAPVGKPVPEHLKRPIEGFACPKSEVSGRRLWGLFAERFGTAEAFFKDHFVANYCPLVWMSSTGANLTPDKLSSAEMEPVEQACLAHLAEVIGILQPEWLVGVGAFAEERLRRAAAKAG---GEFKIGR----VLHPSPASPAANRGWSEAA 230          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A399HZ39_9DELT (Single-stranded DNA-binding protein n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A399HZ39_9DELT)

HSP 1 Score: 212 bits (539), Expect = 1.780e-64
Identity = 118/242 (48.76%), Postives = 144/242 (59.50%), Query Frame = 0
Query:   46 LVASGDELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WE 286
            L+   DELV    RLH              PV   Y+ L YA + +E Y RRYG   P    FV GMNPGPWGM QTGVPFGE+  VRDWLG+ G VGRP +E+ K+ V GF C+RSEVSG RLWG    R+GT + + D  FV NYCPL F+ + G N+TPDKL  AER+ ++ AC  AL   V  L+PS V+GVGNFA  + V A+  SG+  G          + HPSPA+P   R WE
Sbjct:    3 LLKVTDELVAELGRLH-----------FAPPVAHVYNPLVYARQPHEEYLRRYGN-VPKETVFV-GMNPGPWGMAQTGVPFGEISAVRDWLGIDGTVGRPAEEYPKKLVTGFACRRSEVSGRRLWGLIRSRYGTPERFFDRFFVLNYCPLLFLDTDGRNLTPDKLRSAERDTLNAACDRALRRQVELLRPSCVIGVGNFAADQVVRALAGSGIRVGR---------ILHPSPANPAANRGWE 222          
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Match: A0A2A4P0Q3_9BACT (Single-stranded DNA-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A4P0Q3_9BACT)

HSP 1 Score: 212 bits (539), Expect = 1.780e-64
Identity = 115/239 (48.12%), Postives = 147/239 (61.51%), Query Frame = 0
Query:   52 ELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGGGRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHAKRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSSSGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCVEAVKASGLGAGDSESGVEVVVVNHPSPASPTGVR-WEKAA 289
            E++ I+RRL   +    +     +P+T  Y+ L+YA + +E Y RRY   RP  +A ++GMNPGPWGM QTGVPFGEV  VR+WL + GEV +P K H KRP+ G +C RSEVSG RLW +   RF +AD + DN FV+N+CPL FM  SG N TPDKL  AERE + +AC  AL   V ALKP +VVGVG FA  +    + A  +         E+  + HPSPASP   R W   A
Sbjct:    2 EVIDIARRLSREVSNLKF----SEPITHVYNPLDYAWDLHEQYLRRYS--RPGVKAILLGMNPGPWGMAQTGVPFGEVTHVREWLKLDGEVKQPAKIHPKRPIQGLNCHRSEVSGRRLWSWARERFSSADHFFDNFFVFNWCPLCFMEESGRNRTPDKLPAAEREPLQQACDRALVASVRALKPGMVVGVGKFARDQAARILAAEDI---------EIGQILHPSPASPIANRGWAPQA 225          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH1_ECTSI2.070e-16378.93Uracil-DNA glycosylase superfamily protein n=2 Tax... [more]
A0A2D9TGN5_9DELT5.530e-6746.31Single-stranded DNA-binding protein n=1 Tax=Sandar... [more]
A0A2A2QJU9_9BACT1.040e-6649.37Single-stranded DNA-binding protein n=1 Tax=Verruc... [more]
A0A3N5VL41_9BACT6.490e-6647.13Single-strand selective monofunctional uracil-DNA ... [more]
A0A3N5QI00_9GAMM2.220e-6547.68Single-strand selective monofunctional uracil-DNA ... [more]
A0A2W4L8P9_9PROT4.450e-6553.66Single-stranded DNA-binding protein n=1 Tax=Proteo... [more]
A0A831XLZ5_GEOME9.190e-6550.84Single-strand selective monofunctional uracil-DNA ... [more]
UPI001B8AC5B41.080e-6447.93single-stranded DNA-binding protein n=1 Tax=Luteol... [more]
A0A399HZ39_9DELT1.780e-6448.76Single-stranded DNA-binding protein n=1 Tax=Geobac... [more]
A0A2A4P0Q3_9BACT1.780e-6448.12Single-stranded DNA-binding protein n=1 Tax=Planct... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 47..298
e-value: 9.9E-82
score: 275.7
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 75..286
IPR039134Single-strand selective monofunctional uracil DNA glycosylasePANTHERPTHR13235SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASEcoord: 75..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3649366..3652965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1416.1mRNA_C-linearis_contig11.1416.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3649366..3652965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1416.1 ID=prot_C-linearis_contig11.1416.1|Name=mRNA_C-linearis_contig11.1416.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=310bp
MPSTKRGSAAMAKRSSRTADPGSNKSSTSTRTTKKQRKPKAQDSTLVASG
DELVRISRRLHDRLKGQTWRGTSKQPVTCSYDVLEYASETNEAYTRRYGG
GRPLGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLGVRGEVGRPRKEHA
KRPVDGFDCKRSEVSGTRLWGFFERRFGTADTWGDNMFVYNYCPLTFMSS
SGSNITPDKLTPAEREVIDEACGDALADMVSALKPSVVVGVGNFAGAKCV
EAVKASGLGAGDSESGVEVVVVNHPSPASPTGVRWEKAACLDELVLKSSK
SKEIDQFLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR039134SMUG1