prot_C-linearis_contig11.1371.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1371.1
Unique Nameprot_C-linearis_contig11.1371.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length252
Homology
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BLAST of mRNA_C-linearis_contig11.1371.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.560e-68
Identity = 145/250 (58.00%), Postives = 161/250 (64.40%), Query Frame = 0 
Query:    1 AILAGIDGCLRRWKASRDEGQAVLTELSNALLLRTYVDKGRHTRDSDVGSSGGAVWGALAHAGATVPRVSVAAEARARRLHGDLSALQDAMLAAAAGIRRHAQEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAAAECLDAKPARTAVGGVVVEAGNGEAGAVVGGGYGLMDLADAASEVAEMLLKEGLVTATVAQGVGQESHREDREALTVYAAAWMMQPYVDVRRVEELETMVRGRERGR 250
            A L  IDGCLRRWKA+R EGQAVLT+LSNALLLRTYVDKG         ++ GAVWGALA AG TV RVSVA E RARRLHGDLSALQDAM+AAA  +RRHA+E R                        XXXXXXXXX                              A VGGGY L+D+AD  S+VAEML+KE LVTATV QGVGQE  R+DREALTVYAAAWMMQPYVD  R++ELE MV G+ RG+
Sbjct:   25 ATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGXXXXXXXRAATDGAVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGEDHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------AAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGK 265
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI1.560e-6858.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3204422..3205177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1371.1mRNA_C-linearis_contig11.1371.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3204422..3205177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1371.1 ID=prot_C-linearis_contig11.1371.1|Name=mRNA_C-linearis_contig11.1371.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=252bp
AILAGIDGCLRRWKASRDEGQAVLTELSNALLLRTYVDKGRHTRDSDVGS
SGGAVWGALAHAGATVPRVSVAAEARARRLHGDLSALQDAMLAAAAGIRR
HAQEARRRCCRSDPAAQGESHQHSTPGGSSSGGGGGGGSNVAAAECLDAK
PARTAVGGVVVEAGNGEAGAVVGGGYGLMDLADAASEVAEMLLKEGLVTA
TVAQGVGQESHREDREALTVYAAAWMMQPYVDVRRVEELETMVRGRERGR
V*
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