prot_C-linearis_contig11.1289.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1289.1
Unique Nameprot_C-linearis_contig11.1289.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length428
Homology
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: A0A6H5JUT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT1_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 3.190e-133
Identity = 244/412 (59.22%), Postives = 281/412 (68.20%), Query Frame = 0
Query:    9 DGSTTPAPTPAPDAEMQPTGPMVAVYLDNESVEKLHREYPGANPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETESQSQNPSAESSSGTPSEASSA---------------------------EDNERGAFKNESRSESNDAAEESSLG------GENAISSGEGKDSIKGKSXXXXXXXXXXXXXXXXXXEEKLRREEVGMLEDKRASIMKEMLACSQFHHVFGDWNADNGLVPGMPDEEVEGGE 387
            D +TT AP PAP   +Q TGPMVAVYLD+ S+EKL  +YPG NPGRLRK VI+Y+PS +QR LYE  FG SAT+KLTGEASSENR+AL ASVSSAG SVEP SLSCAVDVTPG VGGGPLGSTVLIEQIKR GA+ E+SWKG LPALSAHERDF +EEGS+NKLD+PLTL GSICRADWVEG +G+CRTTT GGGKREDGWTPQ C +CN+LE+SPCRDIYK FD+++ RINELQP  ET          SS G+ S  +S                                             D A E S G       ENA+S  +G  S KG+        XXXXXXXXX  EE+LRREE+ +LE+KR  +M +ML CSQFHHV  D NAD+GLVP M  ++ EGGE
Sbjct:   39 DDATT-APAPAPSPPLQRTGPMVAVYLDDSSIEKLQMKYPGTNPGRLRKVVIEYDPSDEQRGLYEPRFGDSATVKLTGEASSENRVALVASVSSAGTSVEPPSLSCAVDVTPGEVGGGPLGSTVLIEQIKRVGAVAEDSWKGLLPALSAHERDFLSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNSLESSPCRDIYKEFDALNTRINELQPPSET----------SSDGSKSPGTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAFEGSAGTAVGGGDENALSGRQGGHSRKGEGGEKESEEXXXXXXXXX--EERLRREELEVLEEKRTDVMVKMLKCSQFHHVLEDSNADDGLVPDMSGDDEEGGE 437          
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: D7FZ55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ55_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 4.070e-130
Identity = 230/398 (57.79%), Postives = 267/398 (67.09%), Query Frame = 0
Query:   24 MQPTGPMVAVYLDNESVEKLHREYPGANPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETESQSQNPSA--------------------------ESSSGTPSEASSAEDNERGAFKNESRSESNDAAEESSLGG-ENAISSGEGKDSIKGKSXXXXXXXXXXXXXXXXXXEEKLRREEVGMLEDKRASIMKEMLACSQFHHVFGDWNADNGLVPGM--PDEEVEGGEDATSG 392
            +Q TGPMVAVYLD+ S+EKL  EYPG  PGRLRK VI+Y+PS +QR LYE  FGGSAT+K+TGEA S+NRLAL ASVSSAG SVEP SLSCAVDVTPG VGGGPLGSTVLIEQIKR GAL E+SWKG LP LSAHERDF +EEGS+NKLD+PLTL GSICRADWVE  +G+CRTTT GGGKREDGWTPQAC++CNTLE+SPCRDI+K FD++S RI ELQP  ET S    P                            + +  T   A S    +RGA ++ +   S  +A  +  GG ENA+S   G  S   K                   EE+LRREE+ +LEDKR  +M EM  CS+FHHV  D  AD+GLVPGM   DEE E G+ A  G
Sbjct:   57 LQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKVTGEACSDNRLALVASVSSAGTSVEPPSLSCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWKGLLPPLSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEPMTGVCRTTTAGGGKREDGWTPQACSICNTLESSPCRDIHKKFDAVSTRIYELQPTSETSSDGSKPPGXXXXXXXXXXXXXXXXXXXXXXXXXXKQTEATEVVAGS----DRGAGRSGTDIASEGSAGPAVGGGDENALSGRHGGHSPSRKGEVGEKESVAGGSGEPETEEERLRREELEVLEDKRMVVMVEMFRCSKFHHVLEDSYADDGLVPGMLGDDEEGEEGDAAPGG 450          
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: D8LQJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ5_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.360e-46
Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = 0
Query:   71 LYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFV------------GGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETE 249
            +Y   F G A + +TG+ASS  R AL ASVS AG  VEP SLS  +D++P  +            G GPL S VLIEQ K+AGA  EE W+G LP + AH+R F +E G++ +L +P+T+ G+ICRADWV+G S +CR T EGG KRE+ W P  C++C     SPC+ I++ F + SKR +E     ETE
Sbjct:    1 MYRHLFSGKAEVTVTGDASSFARRALVASVSHAGKIVEPASLSATIDISPPAITDPEASAVAENDGPGPLASAVLIEQAKKAGATKEEMWEGTLPPMLAHDRRFPSEPGAYVRLKEPITVYGTICRADWVDGASNVCRDTLEGGQKREEDWEPSDCSICAFFSVSPCKGIFERFVATSKRRDEYLKTYETE 191          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUT1_9PHAE3.190e-13359.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ55_ECTSI4.070e-13057.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQJ5_ECTSI3.360e-4647.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2304842..2314526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1289.1mRNA_C-linearis_contig11.1289.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2303926..2314706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1289.1 ID=prot_C-linearis_contig11.1289.1|Name=mRNA_C-linearis_contig11.1289.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=428bp
MEASAEKPDGSTTPAPTPAPDAEMQPTGPMVAVYLDNESVEKLHREYPGA
NPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASV
SSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKG
QLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTE
GGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETES
QSQNPSAESSSGTPSEASSAEDNERGAFKNESRSESNDAAEESSLGGENA
ISSGEGKDSIKGKSKGKGPQESKGEEPETETEEEKLRREEVGMLEDKRAS
IMKEMLACSQFHHVFGDWNADNGLVPGMPDEEVEGGEDATSGTGSGAGEG
ESSGVATEGEKAGEGGEQPPAAKSAEK*
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