mRNA_C-linearis_contig11.1289.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1289.1
Unique NamemRNA_C-linearis_contig11.1289.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: A0A6H5JUT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT1_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.950e-129
Identity = 244/420 (58.10%), Postives = 284/420 (67.62%), Query Frame = 1 
Query:  181 MEASAEKPDGSTTPAPTPAPDAEMQPTGPMVAVYLDNESVEKLHREYPGANPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETESQSQNPSAESSSGTPSEASSA---------------------------EDNERGAFKNESRSESNDAAEESSLG------GENAISSGEGKDSIKGKSXXXXXXXXXXXXXXXXXXEEKLRREEVGMLEDKRASIMKEMLACSQFHHVFGDWNADNGLVPGMPDEEVEGGE 1341
            M  + +  D +T PAP P+P   +Q TGPMVAVYLD+ S+EKL  +YPG NPGRLRK VI+Y+PS +QR LYE  FG SAT+KLTGEASSENR+AL ASVSSAG SVEP SLSCAVDVTPG VGGGPLGSTVLIEQIKR GA+ E+SWKG LPALSAHERDF +EEGS+NKLD+PLTL GSICRADWVEG +G+CRTTT GGGKREDGWTPQ C +CN+LE+SPCRDIYK FD+++ RINELQP  ET          SS G+ S  +S                                             D A E S G       ENA+S  +G  S KG+        XXXXXXXXX  EE+LRREE+ +LE+KR  +M +ML CSQFHHV  D NAD+GLVP M  ++ EGGE
Sbjct:   32 MRDNEDIDDATTAPAPAPSP--PLQRTGPMVAVYLDDSSIEKLQMKYPGTNPGRLRKVVIEYDPSDEQRGLYEPRFGDSATVKLTGEASSENRVALVASVSSAGTSVEPPSLSCAVDVTPGEVGGGPLGSTVLIEQIKRVGAVAEDSWKGLLPALSAHERDFLSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNSLESSPCRDIYKEFDALNTRINELQPPSET----------SSDGSKSPGTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAFEGSAGTAVGGGDENALSGRQGGHSRKGEGGEKESEEXXXXXXXXX--EERLRREELEVLEEKRTDVMVKMLKCSQFHHVLEDSNADDGLVPDMSGDDEEGGE 437
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BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: D7FZ55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ55_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.260e-125
Identity = 230/398 (57.79%), Postives = 267/398 (67.09%), Query Frame = 1 
Query:  250 MQPTGPMVAVYLDNESVEKLHREYPGANPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETESQSQNPSA--------------------------ESSSGTPSEASSAEDNERGAFKNESRSESNDAAEESSLGG-ENAISSGEGKDSIKGKSXXXXXXXXXXXXXXXXXXEEKLRREEVGMLEDKRASIMKEMLACSQFHHVFGDWNADNGLVPGM--PDEEVEGGEDATSG 1356
            +Q TGPMVAVYLD+ S+EKL  EYPG  PGRLRK VI+Y+PS +QR LYE  FGGSAT+K+TGEA S+NRLAL ASVSSAG SVEP SLSCAVDVTPG VGGGPLGSTVLIEQIKR GAL E+SWKG LP LSAHERDF +EEGS+NKLD+PLTL GSICRADWVE  +G+CRTTT GGGKREDGWTPQAC++CNTLE+SPCRDI+K FD++S RI ELQP  ET S    P                            + +  T   A S    +RGA ++ +   S  +A  +  GG ENA+S   G  S   K                   EE+LRREE+ +LEDKR  +M EM  CS+FHHV  D  AD+GLVPGM   DEE E G+ A  G
Sbjct:   57 LQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKVTGEACSDNRLALVASVSSAGTSVEPPSLSCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWKGLLPPLSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEPMTGVCRTTTAGGGKREDGWTPQACSICNTLESSPCRDIHKKFDAVSTRIYELQPTSETSSDGSKPPGXXXXXXXXXXXXXXXXXXXXXXXXXXKQTEATEVVAGS----DRGAGRSGTDIASEGSAGPAVGGGDENALSGRHGGHSPSRKGEVGEKESVAGGSGEPETEEERLRREELEVLEDKRMVVMVEMFRCSKFHHVLEDSYADDGLVPGMLGDDEEGEEGDAAPGG 450
[Close]
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Match: D8LQJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ5_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.560e-44
Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = 1 
Query:  391 LYERHFGGSATIKLTGEASSENRLALTASVSSAGGSVEPQSLSCAVDVTPGFV------------GGGPLGSTVLIEQIKRAGALTEESWKGQLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTEGGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETE 927
            +Y   F G A + +TG+ASS  R AL ASVS AG  VEP SLS  +D++P  +            G GPL S VLIEQ K+AGA  EE W+G LP + AH+R F +E G++ +L +P+T+ G+ICRADWV+G S +CR T EGG KRE+ W P  C++C     SPC+ I++ F + SKR +E     ETE
Sbjct:    1 MYRHLFSGKAEVTVTGDASSFARRALVASVSHAGKIVEPASLSATIDISPPAITDPEASAVAENDGPGPLASAVLIEQAKKAGATKEEMWEGTLPPMLAHDRRFPSEPGAYVRLKEPITVYGTICRADWVDGASNVCRDTLEGGQKREEDWEPSDCSICAFFSVSPCKGIFERFVATSKRRDEYLKTYETE 191
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUT1_9PHAE1.950e-12958.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ55_ECTSI1.260e-12557.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQJ5_ECTSI6.560e-4447.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2303926..2314706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size2380
Cds size1284
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927453.4396923-UTR-C-linearis_contig11:2303925..23048411622927453.4396923-UTR-C-linearis_contig11:2303925..2304841Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2303926..2304841 -
1690879709.671565-UTR-C-linearis_contig11:2303925..23048411690879709.671565-UTR-C-linearis_contig11:2303925..2304841Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2303926..2304841 -
1622927453.5162325-UTR-C-linearis_contig11:2314526..23147061622927453.5162325-UTR-C-linearis_contig11:2314526..2314706Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2314527..2314706 -
1690879709.7302942-UTR-C-linearis_contig11:2314526..23147061690879709.7302942-UTR-C-linearis_contig11:2314526..2314706Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2314527..2314706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927453.4568603-CDS-C-linearis_contig11:2304841..23054331622927453.4568603-CDS-C-linearis_contig11:2304841..2305433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2304842..2305433 -
1690879709.6810725-CDS-C-linearis_contig11:2304841..23054331690879709.6810725-CDS-C-linearis_contig11:2304841..2305433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2304842..2305433 -
1622927453.468802-CDS-C-linearis_contig11:2305643..23059001622927453.468802-CDS-C-linearis_contig11:2305643..2305900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2305644..2305900 -
1690879709.6905386-CDS-C-linearis_contig11:2305643..23059001690879709.6905386-CDS-C-linearis_contig11:2305643..2305900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2305644..2305900 -
1622927453.4784367-CDS-C-linearis_contig11:2306360..23065461622927453.4784367-CDS-C-linearis_contig11:2306360..2306546Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2306361..2306546 -
1690879709.703019-CDS-C-linearis_contig11:2306360..23065461690879709.703019-CDS-C-linearis_contig11:2306360..2306546Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2306361..2306546 -
1622927453.489154-CDS-C-linearis_contig11:2306827..23070741622927453.489154-CDS-C-linearis_contig11:2306827..2307074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2306828..2307074 -
1690879709.7130678-CDS-C-linearis_contig11:2306827..23070741690879709.7130678-CDS-C-linearis_contig11:2306827..2307074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2306828..2307074 -
1622927453.5029438-CDS-C-linearis_contig11:2314524..23145261622927453.5029438-CDS-C-linearis_contig11:2314524..2314526Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2314525..2314526 -
1690879709.7219658-CDS-C-linearis_contig11:2314524..23145261690879709.7219658-CDS-C-linearis_contig11:2314524..2314526Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2314525..2314526 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1289.1prot_C-linearis_contig11.1289.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 2304842..2314526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1289.1

>prot_C-linearis_contig11.1289.1 ID=prot_C-linearis_contig11.1289.1|Name=mRNA_C-linearis_contig11.1289.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=428bp
MEASAEKPDGSTTPAPTPAPDAEMQPTGPMVAVYLDNESVEKLHREYPGA
NPGRLRKAVIQYNPSADQRSLYERHFGGSATIKLTGEASSENRLALTASV
SSAGGSVEPQSLSCAVDVTPGFVGGGPLGSTVLIEQIKRAGALTEESWKG
QLPALSAHERDFSTEEGSFNKLDKPLTLQGSICRADWVEGKSGLCRTTTE
GGGKREDGWTPQACNLCNTLEASPCRDIYKIFDSMSKRINELQPLKETES
QSQNPSAESSSGTPSEASSAEDNERGAFKNESRSESNDAAEESSLGGENA
ISSGEGKDSIKGKSKGKGPQESKGEEPETETEEEKLRREEVGMLEDKRAS
IMKEMLACSQFHHVFGDWNADNGLVPGMPDEEVEGGEDATSGTGSGAGEG
ESSGVATEGEKAGEGGEQPPAAKSAEK*
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mRNA from alignment at C-linearis_contig11:2303926..2314706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1289.1 ID=mRNA_C-linearis_contig11.1289.1|Name=mRNA_C-linearis_contig11.1289.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10781bp|location=Sequence derived from alignment at C-linearis_contig11:2303926..2314706- (Chordaria linearis ClinC8C monoicous)
CAGTCACATCTCCGAGTCTCCAAGCACCCACAGGCAGGCCACGATGAACC
AGGCAGGACTTACCACGAAGAGGATCTCTCCCTTTGCTGGGGTAGCAGCT
GCTGGGGTGGCAGTGGGTGCTGCTGGCGTGTGGGCCTGGCGCAGGAAATC
TCCACCTGCTACACCTTCACCTGAGAGGTGATGCGGAACCTTTGCCTTTC
CTGTCTTCTCGAGATCGCGTGTGCGGCGCAGAGAGCTAGAGAGCTGCGAG
AGGCTCGGTGGTCAGGTAGAAGACAAGGTAGAAGGAACCCCAAGCACGGC
TATTCGGACAGCCCATTGAGTTCATGTCCAACTGATTCCAGTCCACATCC
TGGCCACCGGAACATAGGGTGATATGTGCGCCTCATGGCGGTGCATTGCG
CAAGTGGAGCCTCAGCAAAACGTCACCCTACTGATGCACACTAGTAGACA
ATTCGTGTGTGGTGATGTCAGGCCCAAGTCGGGGCGAAGAGAGTTAAGGC
AGTCGACCTAGACCGGTCGCTGAGTCGTGTATACAAAGATTGTGAGAACA
CACGCAGGTCGCGTAATAGATAATTCGTCTGTCGGCCCCCTTGGAGGGGC
CCACGGGGTAAAGGCAGAGTCGTTCAAGACCGGTAGATGCGTCGTGTATT
ATCCCTGATATACTTATGGTCATACACGGAAGTTGAGTAATCCAGGAAAA
TCAACATGGGGGCCACACACTCGATGGCATACCCCAATACTATCAATCCA
ACACGTCCCCCCCAATATATACCTACTATGTACCGCAATCCCCCGCCTCA
TCTCCGTATATCTCTCATCCCTGTAACCAAGACAAGTGATGTCACGAGCG
TATGTCTTTCATCCCCCCTGCTCGTGGACTCACTATTGACCTCATTTCCA
ACGACACAGACTCTCTCCTCCAAAATCCCTAAGCACCTCAACTCAACACA
AACACATACACCTAACCTAAAGCCAGAGGCTGAATGCTCTCTTAGATCCT
CGGCTAGATACACCCCGATACCTTTTAATACAATCAGACATCTTTCAACT
TCTTATGTCTCGTTCGTATTGGCAATCCTCAATTCAAAAACAACTCAATC
TGAATCCAGCATCATGGCTCCAACGACGGTTAATTACTCCTTCATCGTCG
CCACTCGAATCCAACATCATGACTCCAACAACGGTTAATTACTCCTTCGT
TGTCGCCACTCATCATAAATTCTTTAATCGTCAAACATTCCACAAAAGTA
AAGCCAAGTTATCATACTTCGTATACAAAGAAATGTCCTGTCCAACACCT
CTCTCTATGTATGTCTTTCCTTCTTTGTGCTCCCTAAAATCCTCCCCATA
AAGTCCATTATCGAGCACAAACTACAGCAGTAGTGTCATCACACCAGTTC
CCCCCATCATCGTCATCCGCATCAAACATATAATTCCTCCCCATAAAATC
CTCATCAATCGCTACTCCCGTTCATGTCAAACTGGCGTCCCACTCAACAC
AAAATTCCTCCTCAAATATAACACAACACAAATCAAACGACACAAATTTC
CCCAAGACTCTCCAACCAAACATTTCAGATACGTGGCCAACGCACCAGCA
GTATTCTAATCAACAAACAATTAATAAGTAGGAGCCGAAACTCTACATGA
CCCAAATTACTCCCACAAAGAACCGTTCAATCAATCTTACCTCAACTTAT
TCCAACAAACGCATCACACGAGACTCTCAAACCAAATTCATCACAATGTC
CCGGTGAAACTCAAAAGCCTCGTTGGCTAGTAGTGCCTTTGTGAGGAAAT
CGGCATGCTGATAAGCCGACGGCACATATCAAATCACCTTAATCTCCTTC
CTCTCAACTAGCTCTCTCAGAAAGTGGCGGCGCACATCAATGTGCTTCGA
GTTCGAGTTGCTAATGGGGTTGTTCGCCAACGAAATCGCTCCCTCGTTAT
CCTCAAACATCGGGATCAAAAGCATCCCAGCCTTCGGCAGTAGGAAACGC
CACACCTGCCTAAGGAACAACAATTCCTTCGTTACATCGGCCAACGCTAC
GTACTCCGCTTCTTCAGTAGTCGAGGTGGTCACACACTTCTGCGTCCTAG
AAAACCAAGACACAACACCACCCCCGCACATCACAACACCTCCAGAAGCA
CTTCGGCGGTCCGCTGCCTTGCTCGCAAAGTCAGCATCGGCAAACGCTAC
AAGGCTCAAGCCCATTCCTACGAAACTCTCATTCCTTACTCTGAAATCAA
ACCAATACCTCGATGATTGCCTTCGAATGGGCATGTTGGTGCGCCAACCG
CACACCGATCACGTTAGATCCAGAATCATAGCAAAACCACTAACAACGAC
TGTTGCTGTCATTGTGTAGCTTTGTGCTGTGGGCACGAGTCCAGAACATC
CGTGACAGGAAACATAAGATAGCCCGAGATCGGGAAAATACTAGAAACTA
ATTGGCCGCTGGGTGTGATAACCCGTCGATTCGATAGATAGAGCGTAATA
GCTCGGCAGGGTGTGATGGCCCAGTACTGGCGTGATAGCCATGTTGGCGT
GATAGCCGATAGGTAAACATAAAACAAGCATTGGCGTGATAGCCGGGTTG
GCGTAATAGCCGGAAAAGGACGGTGGTATTATTCACCCCCAAATCGAACA
CACCGTACAGAGGCAAGCTCACCGCTCACGCATCACATACGCGCACACAC
GCAACCCGCATACTGAAACATCTGGTGGAGGCACAACAAACAATAGAAAA
TCAATAAACAGTATAATCAACTGCTCAACTGCTGTTGTAAGTTGCCTCTA
GAATCATGGTACACACATCCATGTAATTCCCCCCCCATGATTTGTGATGC
AACGTTGATACAGCAAGTCAGATCCCAAATTACTGCAAATCCAATCAAAC
CAATCCGATCGCTGAGCGAGGTGCTCCAGCAGTTAAATGCAATGCCAACG
CAACACACGCAAACAAGAGACAAACCTTACAAACCAAGCCCAGAACCTAA
CCCTAAAGTCCATCGCCTACCCCCGCGGGTGCGACGCCATCTTCCGCCGC
GGCTCCATATGTATTGTCATCTCCGGCCGCGGCTTGGATGCCATCGCACA
AGTCCGCCTAGTTGTGAGGGCAAGGGTGTCGCTCCGCAAGGATTGACTCA
CAGGGCGGGACGTGCACAGGGCAAAGGCGACAGGCCAGTGATAAGTTGAC
TGCACTTAAAAGCGATGTGTAATGTATACCAAGTACACCGACGGGATCCG
TAGGTTGGAAACAAGTGCAAATATATAAATAGCGCCGGACACCTGTCATG
CTGCTATCAAGTTTCACAGCGCATCCATTTCCGTCGCGCCCCAACAACGC
TGTTACCTCACCTAAACCGGGAGTCCGGCGGCGGGAAAATGCCACTCACA
GGTACTACGCCCGCGGAGGCGGCAGGAAAGCGTCCCTCACTCGACATCCC
GCAAAACGGTTCACGACGGGGTCATTCCATGTCACTACATCGTCGTTCTC
GATGGGCGGGAACCCAACTTCGTAAGGCACTACACCGGAAAGTCCGGTGG
TTGCAAGGGGGGGCGGGGGGCAAACCATCACGCAATTCATGCGAAGGCAC
GACACCGGCAACAGCAGTACCGGTGGGCGGGAAACGGTCATCACCAGCAG
TGGGGACATGGGGGGAAAGCGCCCCGGAGGGAAACACCAAAAGCGGGCAG
TGCAGTCGCTACCTCGGGAACTGCCATGAAATAGAAGGGACGAGCCCTAT
GTGTTACATGCCAACCTGGAACAAGCGGACATATATAGCAGTAGTGCCTC
TTTTCAGCAAGCATTCAAATATTGTCACCGATGGGGCAGACTCACAAACA
ATGCTGCAACATAAATTTACCCAGAAAATTCACCCCCGAAACCAACCGAA
ACCGCAAGATAAATGCGACTCAAAATCAACACACACATATGATATCATAG
AAAAAAAAATTGAAGGCGAAAACGTGCCTTGATCTGGCAGCGAGCATAGC
TCGTGCCAGTCTCCCTGTAATGTCTTCATCGTCCGCTGACGTCGATGGCA
TCTCCCGTGATGGAAGGAATGTTCTTGGCTCCTGCTGCCGCTGCTGTGAA
AGCTGTGTCTCATCAGGGGGTTCCCGGCTCTGGTCTTCGGTCCGCCCTGG
TCTTCAACATTGTTATACTCCCGTGTCTCGTCAAGGCGCCGGCTCTGAGT
CTCGGCAGTCCCCTGGTCTTAAACACGTTGTTGTGCTCTCTCTGTAGATA
CCCTTCCTCTCTCTTTATACACCTGCCGAGCGACTTGAATGGCGTCCCAT
CCCGTCGCTCGAACTCGCTGCTGCTATCGACCCTCTCATGAATCACACAC
AGGCAGGCTGCTGTGTGTGGTCTCTCACAGCACTCACCCACGAACCTCTT
TGACGCTAGCGTAATAGATAATTCGTCTGTCGGCCCCCTTGGAGGGGCCC
ACGGGGTAAAGGCAGAGTCGTTCAAGACCGGTAGATGCGTCGTGTATTAT
CCCTGATATACTTATGGTCATACACGGAAGTTGAGTAATCCAGGAAACTC
AACATGGGGGCCACACACTCGATGGCATACCCCAATACTATCAATCCAAC
ACGTCCCCCCCAATATATACCGCAATCCCCCGCCTCATCTCCGTATATCT
CTCATCCCTGTAACCAAGACAAGTGATGTCACGAGCATATGTCTTTCATC
GCGCATGCATTCTGGAAACTCAACCCGGGGGCCACACATTCAATGGTACC
CCAAAACCCAATGCCAATCCCAACACATATCCCCCTAAATATCCCGCAAT
ATCCCGCCATGTCTCAGTACATCTCTCATCCCTGTCATCAAGACAAGTGA
TGTCACGAGTATGTCTTTCACACACATTGTATCTAACGTATCCTTCTGGC
GATTTCCTCCTGACGAACACGCGATGATATACTTCCTCTGTGCCATAAGT
AAAGATCCTTATGTTCACACAGACGATTAACCGTGTCCAATGCCGAAGGC
GACCAATTTTTTGAAATCTTCGGCGTTTTTTGAGTTAGTGTCCTTTTTTT
TTTTTGTTGCACGCACCACCCCACTTGCATGAGCGGCCGAGAAAAAACCA
GTCGGCCTGAAAAAGGCCGTATTTTGTATTTTGCAGGTATGTTGCCCCCT
CCGACCAGGGGGGGGGGGAACACCGACAAAAACAAGACGAAAAAACCAAG
AATTATCCCCGAAGATAGAAGATGGAATTTTCTACCGATTGTGTCAAAAA
ATTGTTTTGCTCTTGCATTAGATAAATACATGCAGAGGGTCTTTTATAGG
ACACTCCGGACTAACCCTGTGTACGCCGATGATACGCACTAGGCCGTGAG
TCTAGATTGTGAGTAGTAGGTGAACACATGACTTGTCTGTCGCATTTTGT
TAGACATGCATTTGTTTTGGCCCGAGCGTTCGAAGAACACCGTCTCCCTG
TTCATTTTTTTCTGATTTTTGGATCTTCCTATTCTGTCGTTTGAGCGCCG
TCTCCGCCGCGGTTTTGTTGTAGGACGGTCTATTGAGCAGCACTCCAGAC
AGCAGTTGCAGTAGGTCTACCTCGGGGACTTGTAGGACGGTCTATTGAGC
AGCACTCCAGACAGCAGATGCAGTAGGTCTACCTCGGCGACTTATGTATG
TGACACGCGGACTGTTGCAGACAGAATTTTCGTGACTGGTCAACTTTTAT
TGCTGTAGTTCGATTGGGCGTTCTCTATATTGATTCGTGGTGCAGGTTGC
CTCACCCTCGTGTGTTTTTGTGGTTTTGTTTAGGCTTTCTGCTAGCCACG
TTATGGTTTTTGGGTATTATTGATGGTAGGCTCCTTGCGCTCTGTGACCA
CGGAAATTGGCCGTGTCTGTTGGATCAGTACGGACAAAGGGGGTACTGGG
TGGAGAGATCGGGATGGTTTTTTATGTGAAGACAACAACAACAACAACAA
CAACAACATCCCCGACCCTAAACCTAGCCCCCCTCTACTCAACGATCCAT
GACGCTTCCCCCATAATAAAAACAGTATAATAGTGACCCCCACACTAAAA
ACAAGACACTTGGGTGTTCCACACTAACACCAATACACTTGGTGGGGCCA
CATTAAAACCAAGACACATGCGGGGCAAAGCAAGCAACAGTAGGGCCCTC
ACCCAACCCCCCGCTCTACTCAACGATCCATGTCTCGTGCCCCTATACTA
AAACCAGTACAATATTGACCCCACACTAAAATCAATACACTTGAGGGTCA
CACACTACAACCAATACACTTGGGGGACCCACACAAAACCAAGACACTTG
CGGGGCAAAACAAAGGGTTGGTTGGTGGCGGGGGAAAAAAGGGAAAAAGT
CGATTAGTCTTCCTCGGTGTCACTGGGGGACTTAGCTAGGTAGTCCCAGG
CCTTCTTGAAGGCCGGCTGGTAGTATTCTACCACCCTTTCTAACGTTCCT
GCTCTCTGCCGCGCGGTCACCCCCGTATGCTCCACACTAAAGTCGTTGTC
GCCCATCGCACGGAGTATTTGGTTGTAAACCTTGAAGAGGCTCTGCCACA
CCCGCTCTAAGGTGTCACCGTCGTACTCCTCGTACTGTCGTAAGAAGTGA
CGGCCGTCCACTACGAGGTTTGTTTGAGAGGTCGAGCTCCCCCGTTTCGT
TGATCTGAGCTTTGCACTCGTGCCAATGTTTTTTGGGGTAACCAGCACCG
ACACCGTAGCGTTCCACGAGGGGGCCTAAAACGCCCTTGGGCACCCTTTC
CATTCCTGGCGGAATGGACAACGCTATTTCCACCGCCATGGCATAACGGC
GGCCCAGGGACACTTCGGCGCCCCGTTTGCGTTTGGGGGGGGGTCTCCAT
TGTGGTTGTGGGGGGCGATGGGCGTTCAAACGTCGAAAATAACAGAAATT
CTCAATATTCTCGAAACAATTCTCAAAAATATCCCAGAAACCCCGCCAAA
ATCCCCAATATTCGACACACCATTTCTCAGTAATTACGAATCGGATTCAA
CTTTTTTTTTTTAGAGGCATCCTCGAATCCATAGCTTTCCGACAAGTCTA
ATTGTAGTATCGTGATTGACTAGGTTGGCGAGATATGATTTGCCCCCCAT
AAGGACCTTTACTTATGGCACAGAGGAAGTATGCTCTGTGACAGCAGGGT
TTTAAATCCCGCTGACGTGTGTGTATTTATATTGCAAATTGAAAGTGCTT
TTCATCGGACTGCCTTCGGGAAGAAATTGCTGCTGTACATCTGTGATTTA
GAGTACAGGGGGCTCCGTAACCCTAACCCCAACCACCGACCCCCCCACAG
TTAGCCGATTCCATACTTCATCCCATATGTTTTCTTACTACAAGCCTGCG
TAGACTACCGTTTTCATCGTTGGCACCCACCACGGGTCCTCTAGCACCAT
TATCAAGCATTGTGTACAAATGACACCAATTCCTGGCAAATCAGATGGAG
ACTGCGAATCCCTTCGAGAAAACAACCTCAGCATGCTGCTCCGAAAAATA
AGCACAGTCGGCGAAAAGGTAAAGTTTTCTCTTCTCGAGGGAACCGCAGC
AACACTCGAGTCGACACTACAATAGCGTCCCCGAGTAACCCCGCGCATGG
CCGCCCACGCCGGCAACGCCCGTCGCTTGCAGGGAAGCTTCAGCAGAAAA
GCCCGATGGATCAACCACGCCTGCGCCAACACCAGCACCAGACGCAGAGA
TGCAGCCCACCGGGCCGATGGTGGCGGTTTACCTAGACAACGAATCCGTG
GAAAAGCTGCACCGAGAGTACCCGGGCGCTAACCCCGGGCGGCTGAGGAA
AGCGGTTATCCAGTACAACCCTTCCGCTGATCAGCGCAGCTTGTATGAAA
GGCACTTCGGTGGCTCGGCTACAATCAAGGTATGTATCGATGGTAGACTA
GTAGGACATGACCGCTCCCTGTTTCCTGCAGCATTGAGGTTACACCTTTC
GGTAAACCTCGTCACTCCAGCATCACTTCTCATCTCGTGACTACACGCTC
GAAACGATGGTTGAAAGCTCGATGGTGTGCTGCGTTCAACACACGCCAAC
ATAAACATTCCCACGGCTTGCAGCCATGCACACCCATGATTTATTACCTC
TTCCCTCTCTCGCCCTTTTCTCCCGCAATGTGATGCTGTGATGATAATTT
GCCGTGAAAGTTAACCGGCGAAGCTTCCAGCGAAAACCGCCTTGCCCTGA
CTGCTTCGGTGTCTAGTGCCGGGGGCTCCGTGGAGCCCCAGTCTCTGTCC
TGCGCCGTGGACGTAACCCCGGGGTTTGTGGGTGGAGGTCCCCTAGGCAG
CACGGTCCTCATCGAGCAGATCAAGCGGGCTGGGGCACTCACGGAGGTGA
TTGACATTGACATTGACATGATGCTTGCTGTGTCGTTGCGTTAGCCGATA
GACTAGATTCATCAAGACCAATGTTAATGTTGTAGAAATTTTGGTAATCC
ATCTTTTCCTTTCTGACTCATCCATGTCCCCCGAAACCCCTTGCATACCA
AGCTATACTATTTACAAGCTAAGCTGTCTTGTCCACTAGGCAACGTCCGA
TGACACCTTTGTAAGAAGCTCTTTCCTTGTGCGAGCCGAAGCTATAGATA
TGATTTCTTCGTCTCTTTTTCGAAATTCCAACCTACATACAATCTAGCAA
ACACAATCGGCCTTCAACCAGCATCTATATGTAGAGCACCGTATCAGTTG
CTCTTGTTGGTCTCTATGTATGTACTTGACATGTACTTCGGAAAGTATGT
ATGTATGTATGTCGCACAACTATAGACACGCTGGCTCTTTTTATTTGTCG
CACCAGGAATCGTGGAAAGGTCAGCTTCCCGCTCTTTCGGCCCACGAAAG
AGACTTCTCGACCGAGGAGGGCAGCTTCAACAAACTAGACAAGCCCCTCA
CTCTCCAGGGCTCAATTTGCCGAGCGGATTGGGTGGAAGGCAAGAGCGGT
CTTTGCCGAACCACGACCGAAGGAGGGGGGAAGCGGGAGGACGGATGGAC
GCCCCAGGCCTGCAACTTGTGCAACACGTTGGAAGCTAGTCCGTGCCGAG
ATATTTACAAAATGTGAGTACTTGTTCTCTTGATTGTATTCGCCGTGGCC
GAGGTTTGTCCTCCTTCGAGGGTCTATTTTATGGGAGTAAATATTTTGAA
CGTCACCGAATGATCTCTTTCTCTTCCACTGCTGCTGTCGGAAGAGGTCC
AATGTTACCTCGCCGGTATTTTGTCGGTCTGACGTATTTCCTGACTGCCT
GATCTCTACCCTCCGCCCAACAGATTCGACAGCATGTCCAAGAGAATAAA
CGAGCTCCAGCCGCTGAAAGAGACTGAGAGTCAGAGTCAGAATCCTTCCG
CCGAAAGTTCTTCAGGAACTCCCTCAGAAGCTTCCTCGGCAGAAGACAAC
GAACGAGGTGCTTTCAAGAACGAATCGCGATCTGAGAGCAATGATGCCGC
TGAAGAGTCCAGCCTCGGCGGTGAAAACGCGATTTCGAGCGGAGAAGGGA
AAGACAGCATAAAGGGTAAGAGTAAGGGCAAAGGCCCCCAGGAGAGCAAA
GGCGAAGAGCCGGAGACGGAGACGGAAGAGGAGAAGCTGCGACGGGAGGA
GGTGGGCATGCTAGAGGACAAGAGGGCTTCGATCATGAAAGAGATGCTCG
CGTGCTCGCAGTTCCACCACGTGTTTGGGGATTGGAATGCTGACAATGGA
TTGGTGCCGGGCATGCCTGATGAGGAGGTAGAGGGCGGTGAAGACGCGAC
CTCTGGGACGGGCAGTGGGGCCGGGGAGGGCGAAAGTAGCGGCGTTGCGA
CAGAGGGGGAAAAAGCGGGAGAGGGTGGAGAACAGCCGCCGGCAGCTAAG
AGTGCCGAAAAATAGTCTAGAACGCAGCAGCAGCAGCCAGCAGCAGCAGA
AGTAGTGCCGTTGACGACTCTGCACCCTATTGAAGACTCACAAGTTGATG
TTGCGCCGACAAGGACGTCGATGACACCCGTGTTGATGAGATCCCCGTGT
GTCATCAACATAGATTTCGACGCCTCTCGGCTGCGTCGGCGCGCGACGCC
AGCTCCCTCTGGAGCTGCAAGCGATTGATGCGGTTGCCCTTGCGTGGGAC
ATCGGCGTTGTTGACGGCTTGGCCGTGTGATGTGGCGGAGTTGCCGTTGG
CCGCGCCGTTTACAAGGGAATCGCCGTTGCCGGAGGGCATGGGGACAAGG
GTGTTGTTGGCAGGGGTGTCGTTGCCGTTGCTGGTATCAGCAGCGGCGGA
GGTGGAAGAGTCGTTGTTGGAAGAGGTAGCCGGATGATTTCGTTCTTCTT
CGTCGGCCCAAGACATGGTTGCTGGGGGAGACATAGGTGTTTGTTGAAAC
TTCTGAAGGGACAGGTTCAACAGACACCGATGGAGGGTGTAATCCCTCAA
ATCCTGCAGGGTGTTTCATCGCAAGCAACGGTCGTGGGTTGTGGTTGGTG
TACACAGACACCAGACAGGCGAAGGACTCTACTACTAGTCGGAATCTCGG
GAGAGATCGGACGCGAACAGAAGGAGAGGTGATAAAAGGGGGCGACCCAT
ATGTCATGTGCTTTTTCTTTGGCCAGCCGTGTCGATTAGCACAGAAGCAT
GGGCCCCGATAGTCTTTTCGACTAGTCACTGCACAGCGTGCGCGGATGTG
TTTCGACCACCACGGAGTTCGGTCGAAAGCGGCTGGTGAGCAACATCAAC
ACAGGCAGCAGCACTAAGTAGTAGAGTGAACAGAAAAAAACATGAACGAC
AGAAACATGCGAGGGTGCGGCTCGCTTGACC
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Coding sequence (CDS) from alignment at C-linearis_contig11:2303926..2314706-

>mRNA_C-linearis_contig11.1289.1 ID=mRNA_C-linearis_contig11.1289.1|Name=mRNA_C-linearis_contig11.1289.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at C-linearis_contig11:2303926..2314706- (Chordaria linearis ClinC8C monoicous)
ATATGGAAGCTTCAGCAGAAAAGCCCGATGGATCAACCACGCCTGCGCCA
ACACCAGCACCAGACGCAGAGATGCAGCCCACCGGGCCGATGGTGGCGGT
TTACCTAGACAACGAATCCGTGGAAAAGCTGCACCGAGAGTACCCGGGCG
CTAACCCCGGGCGGCTGAGGAAAGCGGTTATCCAGTACAACCCTTCCGCT
GATCAGCGCAGCTTGTATGAAAGGCACTTCGGTGGCTCGGCTACAATCAA
GGGAAGCTTCAGCAGAAAAGCCCGATGGATCAACCACGCCTGCGCCAACA
CCAGCACCAGACGCAGAGATGCAGCCCACCGGGCCGATGGTGGCGGTTTA
CCTAGACAACGAATCCGTGGAAAAGCTGCACCGAGAGTACCCGGGCGCTA
ACCCCGGGCGGCTGAGGAAAGCGGTTATCCAGTACAACCCTTCCGCTGAT
CAGCGCAGCTTGTATGAAAGGCACTTCGGTGGCTCGGCTACAATCAAGTT
AACCGGCGAAGCTTCCAGCGAAAACCGCCTTGCCCTGACTGCTTCGGTGT
CTAGTGCCGGGGGCTCCGTGGAGCCCCAGTCTCTGTCCTGCGCCGTGGAC
GTAACCCCGGGGTTTGTGGGTGGAGGTCCCCTAGGCAGCACGGTCCTCAT
CGAGCAGATCAAGCGGGCTGGGGCACTCACGGAGTTAACCGGCGAAGCTT
CCAGCGAAAACCGCCTTGCCCTGACTGCTTCGGTGTCTAGTGCCGGGGGC
TCCGTGGAGCCCCAGTCTCTGTCCTGCGCCGTGGACGTAACCCCGGGGTT
TGTGGGTGGAGGTCCCCTAGGCAGCACGGTCCTCATCGAGCAGATCAAGC
GGGCTGGGGCACTCACGGAGGAATCGTGGAAAGGTCAGCTTCCCGCTCTT
TCGGCCCACGAAAGAGACTTCTCGACCGAGGAGGGCAGCTTCAACAAACT
AGACAAGCCCCTCACTCTCCAGGGCTCAATTTGCCGAGCGGATTGGGTGG
AAGGCAAGAGCGGTCTTTGCCGAACCACGACCGAAGGAGGGGGGAAGCGG
GAGGACGGATGGACGCCCCAGGCCTGCAACTTGTGCAACACGTTGGAAGC
TAGTCCGTGCCGAGATATTTACAAAATGAATCGTGGAAAGGTCAGCTTCC
CGCTCTTTCGGCCCACGAAAGAGACTTCTCGACCGAGGAGGGCAGCTTCA
ACAAACTAGACAAGCCCCTCACTCTCCAGGGCTCAATTTGCCGAGCGGAT
TGGGTGGAAGGCAAGAGCGGTCTTTGCCGAACCACGACCGAAGGAGGGGG
GAAGCGGGAGGACGGATGGACGCCCCAGGCCTGCAACTTGTGCAACACGT
TGGAAGCTAGTCCGTGCCGAGATATTTACAAAATATTCGACAGCATGTCC
AAGAGAATAAACGAGCTCCAGCCGCTGAAAGAGACTGAGAGTCAGAGTCA
GAATCCTTCCGCCGAAAGTTCTTCAGGAACTCCCTCAGAAGCTTCCTCGG
CAGAAGACAACGAACGAGGTGCTTTCAAGAACGAATCGCGATCTGAGAGC
AATGATGCCGCTGAAGAGTCCAGCCTCGGCGGTGAAAACGCGATTTCGAG
CGGAGAAGGGAAAGACAGCATAAAGGGTAAGAGTAAGGGCAAAGGCCCCC
AGGAGAGCAAAGGCGAAGAGCCGGAGACGGAGACGGAAGAGGAGAAGCTG
CGACGGGAGGAGGTGGGCATGCTAGAGGACAAGAGGGCTTCGATCATGAA
AGAGATGCTCGCGTGCTCGCAGTTCCACCACGTGTTTGGGGATTGGAATG
CTGACAATGGATTGGTGCCGGGCATGCCTGATGAGGAGGTAGAGGGCGGT
GAAGACGCGACCTCTGGGACGGGCAGTGGGGCCGGGGAGGGCGAAAGTAG
CGGCGTTGCGACAGAGGGGGAAAAAGCGGGAGAGGGTGGAGAACAGCCGC
CGGCAGCTAAGAGTGCCGAAAAATAGATTCGACAGCATGTCCAAGAGAAT
AAACGAGCTCCAGCCGCTGAAAGAGACTGAGAGTCAGAGTCAGAATCCTT
CCGCCGAAAGTTCTTCAGGAACTCCCTCAGAAGCTTCCTCGGCAGAAGAC
AACGAACGAGGTGCTTTCAAGAACGAATCGCGATCTGAGAGCAATGATGC
CGCTGAAGAGTCCAGCCTCGGCGGTGAAAACGCGATTTCGAGCGGAGAAG
GGAAAGACAGCATAAAGGGTAAGAGTAAGGGCAAAGGCCCCCAGGAGAGC
AAAGGCGAAGAGCCGGAGACGGAGACGGAAGAGGAGAAGCTGCGACGGGA
GGAGGTGGGCATGCTAGAGGACAAGAGGGCTTCGATCATGAAAGAGATGC
TCGCGTGCTCGCAGTTCCACCACGTGTTTGGGGATTGGAATGCTGACAAT
GGATTGGTGCCGGGCATGCCTGATGAGGAGGTAGAGGGCGGTGAAGACGC
GACCTCTGGGACGGGCAGTGGGGCCGGGGAGGGCGAAAGTAGCGGCGTTG
CGACAGAGGGGGAAAAAGCGGGAGAGGGTGGAGAACAGCCGCCGGCAGCT
AAGAGTGCCGAAAAATAG
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