prot_C-linearis_contig109.1134.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig109.1134.1
Unique Nameprot_C-linearis_contig109.1134.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length113
Homology
BLAST of mRNA_C-linearis_contig109.1134.1 vs. uniprot
Match: A0A6H5KUF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 8.190e-34
Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = 0
Query:    1 DISGSWDTENLVSPPFDCTCTTLKANYHCPNLGKDGYPKWNPPAVSSGSCKPKDMKTLKQEPFPPGFKVLFFGNSHIRQVVQSILCTFPGAIQTRWL 97
            D+SG WD  ++V+PPFDCTC TLKA+Y CPNLG  GYPKWN    +SG+C+ ++   L+ EP PP F+VLF+GNSH+RQVV+ I+C +  +I++R L
Sbjct:  115 DLSGMWDKSSMVAPPFDCTCRTLKASYFCPNLGTGGYPKWN----TSGACERRERSALQNEPLPPAFRVLFYGNSHLRQVVEGIVCAYSTSIRSRCL 207          
BLAST of mRNA_C-linearis_contig109.1134.1 vs. uniprot
Match: D7G2P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.510e-31
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0
Query:    1 DISGSWDTENLVSPPFDCTCT-------TLKANYHCPNLGKDGYPKWNPPAVSSGSCKPKDMKTLKQEPFPPGFKVLFFGNSHIRQVVQSILCTFPGAIQTRWLTLEGDTSEVAWRPDVV 113
            D+SG WD  ++V+PPFDCTC+        L A+Y CPNLG  GYPKW+    +SG C+ ++   L+ EP PPGF+VLF+GNSH+RQVV+ I+C +  +I++R L +  D   +A    +V
Sbjct:  112 DLSGMWDKSSMVAPPFDCTCSGSGRAGRALNASYFCPNLGTGGYPKWS----TSGGCERRERSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRVVVDGESLAQEDTLV 227          
BLAST of mRNA_C-linearis_contig109.1134.1 vs. uniprot
Match: A0A6H5KAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.250e-19
Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 0
Query:    2 ISGSWDTEN--LVSPPFDCTCTTLKANYHCPNLGKDGYPKWNPPAVSSGSCKPKDMKTLKQE--PFPPGFKVLFFGNSHIRQVVQSILCTFP--------------GAIQTRWLTLEGDT 103
            +S  W      +  PP+ C C   KA Y CPNLG   YP+W P AV+ G C+    + +     PFPP  KVLF+GNSH+RQ +++ILC F                A +T +L + GDT
Sbjct:  138 LSSEWSQGQGGVWKPPYGCDCAFSKARYFCPNLGSGVYPRWVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQTLEAILCLFQKDVVSKRLRFVSATNANETAYLEVPGDT 257          
BLAST of mRNA_C-linearis_contig109.1134.1 vs. uniprot
Match: A0A835Z986_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z986_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.030e-12
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    4 GSWDTENLVSPP-FDCTCTTLKANYHCPNLGKDGYPKWNPPAVSSGSCKPKDMKTLKQEPF-PPGFKVLFFGNSHIRQVVQSILC 86
            GSW+       P +DC+C   KA YHC        P W P A+  G C+      L   P  PPG +VLF GNSH+RQ+V+S LC
Sbjct:   57 GSWEQRTAHQEPLYDCSCPLAKARYHCHEFNAVDGPVWVPRALVKGECR-----ALPHNPLVPPGARVLFAGNSHMRQLVESGLC 136          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KUF6_9PHAE8.190e-3455.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2P7_ECTSI2.510e-3145.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAG2_9PHAE2.250e-1938.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z986_9STRA5.030e-1242.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:465723..471692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1134.1mRNA_C-linearis_contig109.1134.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig109 465723..471693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig109.1134.1 ID=prot_C-linearis_contig109.1134.1|Name=mRNA_C-linearis_contig109.1134.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=113bp
DISGSWDTENLVSPPFDCTCTTLKANYHCPNLGKDGYPKWNPPAVSSGSC
KPKDMKTLKQEPFPPGFKVLFFGNSHIRQVVQSILCTFPGAIQTRWLTLE
GDTSEVAWRPDVV
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