prot_C-linearis_contig109.1130.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig109.1130.1
Unique Nameprot_C-linearis_contig109.1130.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length286
Homology
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A835YL21_9STRA (HopJ type III effector protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL21_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.150e-35
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0
Query:  179 ARLVEEPGSVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            ARL +   +V FE+ M  I A +++ PK F NG   + AG NEGSCKVF+FGK+A L  A TL+CFG+H+R VLADP G +H NIR+FME+GW GV FP+G++L+PK
Sbjct:   17 ARLAQASDAVTFEDTMEVIAANYEFAPKPFTNGDVHNAAGTNEGSCKVFSFGKLAALDEASTLSCFGQHYRDVLADPAGAAHANIRSFMEAGWGGVHFPEGVALTPK 123          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A813DTD3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DTD3_POLGL)

HSP 1 Score: 141 bits (356), Expect = 3.520e-34
Identity = 67/109 (61.47%), Postives = 78/109 (71.56%), Query Frame = 0
Query:  177 LRARLVEEPGSVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            LRAR       + F E + AI A F+YTPKRF NG   S AG NEGSCKVF+ GK+AG S AE LACFGEH++ VL DP G SHGNIRAFM+ GW GV+FPDG++L P 
Sbjct:  476 LRARFSAGQSELAFAETLAAIAADFEYTPKRFVNGGVESAAGSNEGSCKVFSLGKLAGFSEAEVLACFGEHYQQVLGDPAGTSHGNIRAFMKHGWAGVDFPDGVALEPS 584          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A6S6S0H3_9GAMM (Type III effector HopPmaJ n=1 Tax=uncultured Thiotrichaceae bacterium TaxID=298394 RepID=A0A6S6S0H3_9GAMM)

HSP 1 Score: 120 bits (300), Expect = 1.420e-30
Identity = 54/99 (54.55%), Postives = 73/99 (73.74%), Query Frame = 0
Query:  187 SVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            S++F + + AI+A ++YTP+ F+NG   + AG NEGSCKVFAF ++  LS  +TL CF EH+R VLA PEG+ HGNIR FME+GWDG+ F  G++L  K
Sbjct:   16 SLVFSDVIAAIDANYEYTPQTFKNGEVENAAGTNEGSCKVFAFAQLNDLSQEQTLTCFAEHYRSVLATPEGNDHGNIRNFMETGWDGINFT-GVALQAK 113          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A7Y4A5Z9_9VIBR (HopJ type III effector protein n=1 Tax=Vibrio sp. RE86 TaxID=2607605 RepID=A0A7Y4A5Z9_9VIBR)

HSP 1 Score: 119 bits (299), Expect = 2.120e-30
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 0
Query:  181 LVEEPGSVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFR-GVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            L E+P S+ FE+ M  IEA FD+ P  F+NG T + A +N GSCK+FAFG+V GLSP  TLACFG+ +R  VL +P+GD H NIR F+E GW G+EF +G +L  K
Sbjct:   10 LSEQPTSIQFEDTMAVIEANFDFAPTAFKNGNTLNEANQNNGSCKIFAFGQVKGLSPEATLACFGKFYREDVLGNPDGDDHANIRNFIEFGWSGIEF-EGEALKVK 114          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A4Q7YNP1_9GAMM (HopJ type III effector protein n=1 Tax=Fluviicoccus keumensis TaxID=1435465 RepID=A0A4Q7YNP1_9GAMM)

HSP 1 Score: 119 bits (298), Expect = 2.900e-30
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  186 GSVMFEEAMGAIEAGFDYTPKRFENGVTS---SGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            G   FE+ +  I A ++Y P RF NG+T    S AG+NEGSC++FAFG++ GLS  +TL CFG H+R VLADP+G SHGNIR FM  GW G+ F DG  LSPK
Sbjct:   12 GETDFEDTIALINALYEYRPTRFSNGLTDTLVSEAGQNEGSCRIFAFGQLNGLSAEDTLRCFGRHYRDVLADPDGSSHGNIRRFMRDGWAGIAF-DGPVLSPK 113          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A2E9DDM5_9GAMM (Type III effector n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A2E9DDM5_9GAMM)

HSP 1 Score: 116 bits (290), Expect = 4.220e-29
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0
Query:  175 EGLRARLVEEPGSVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            E L ARL  +  ++ FE+ +  I   F+YTP  F NG   + AG+NEGSCK+ AFG++AGLS A+TLACFG  +R VLA PEG  HGNIR FM+ GW G+ F +G+ L+P+
Sbjct:    4 EQLTARLGTDE-TIDFEDVIAFIGEHFEYTPCAFRNGDLHNEAGQNEGSCKILAFGQLAGLSEAQTLACFGRFYRDVLATPEGSDHGNIRNFMDKGWSGIRF-EGIPLAPR 112          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: UPI000475B552 (HopJ type III effector protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI000475B552)

HSP 1 Score: 115 bits (288), Expect = 9.690e-29
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0
Query:  187 SVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEF 276
            S+ F + +  I+A + YTP+ F+NG  SS AG NEGSCKVFAFG + GL+  +TL CF EH+R VLA PEG +H NIRAFM SGW+G++F
Sbjct:   16 SLQFSQVIAVIDAHYAYTPQAFQNGALSSPAGTNEGSCKVFAFGLLQGLTQEQTLHCFAEHYRAVLAHPEGHNHANIRAFMLSGWEGIQF 105          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A6L6JIR5_9GAMM (HopJ type III effector protein n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A6L6JIR5_9GAMM)

HSP 1 Score: 115 bits (287), Expect = 1.250e-28
Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 0
Query:  180 RLVEEPGSVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFR-GVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            RL  EP S+ FE++M  IEA +D+TP  F NG   + AG+N GSCK+ AFG++ GLS  +TLACFG+ +R  VLA+P G+ H NIR FM +GWD V F  G +L PK
Sbjct:    9 RLESEPESIQFEDSMAVIEANYDFTPTAFRNGEILNEAGQNNGSCKILAFGQLNGLSVDQTLACFGKFYRQDVLANPNGEDHQNIRNFMRTGWDEVSF-HGTALMPK 114          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A2P6ASG6_9GAMM (Type III effector (Fragment) n=1 Tax=Amnimonas aquatica TaxID=2094561 RepID=A0A2P6ASG6_9GAMM)

HSP 1 Score: 114 bits (284), Expect = 2.670e-28
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0
Query:  190 FEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEF 276
            FE+    I   +DYTP  F NG  S+ AG+NEGSC++FAF ++ GLS A+TL CFG H+R VLA+P+G SHGNIR FM+ GW+G+ F
Sbjct:   17 FEDIQSYIRNHYDYTPTAFRNGSVSNDAGQNEGSCRLFAFARLEGLSEADTLVCFGRHYRDVLAEPQGSSHGNIRQFMQHGWEGIAF 103          
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Match: A0A1Y5ELY6_9GAMM (Type III effector n=1 Tax=Cycloclasticus sp. 46_120_T64 TaxID=1856281 RepID=A0A1Y5ELY6_9GAMM)

HSP 1 Score: 113 bits (283), Expect = 4.490e-28
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:  187 SVMFEEAMGAIEAGFDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRGVLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK 285
            +++F + M  IEA +D+TP  F NG   + AGEN GSCK+FAF K+   S AETLACFGE++R VLA P GD H NIR FM+SGW G++F +G  LS K
Sbjct:   13 TLVFSDTMNIIEALYDFTPSAFSNGNIRNEAGENNGSCKLFAFAKLNNFSDAETLACFGEYYRDVLATPNGDDHQNIRNFMKSGWAGIQF-NGNPLSEK 110          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL21_9STRA1.150e-3556.07HopJ type III effector protein n=1 Tax=Tribonema m... [more]
A0A813DTD3_POLGL3.520e-3461.47Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6S6S0H3_9GAMM1.420e-3054.55Type III effector HopPmaJ n=1 Tax=uncultured Thiot... [more]
A0A7Y4A5Z9_9VIBR2.120e-3054.72HopJ type III effector protein n=1 Tax=Vibrio sp. ... [more]
A0A4Q7YNP1_9GAMM2.900e-3056.31HopJ type III effector protein n=1 Tax=Fluviicoccu... [more]
A0A2E9DDM5_9GAMM4.220e-2952.25Type III effector n=2 Tax=Oceanospirillaceae TaxID... [more]
UPI000475B5529.690e-2957.78HopJ type III effector protein n=1 Tax=Thiofilum f... [more]
A0A6L6JIR5_9GAMM1.250e-2853.27HopJ type III effector protein n=1 Tax=Methylophag... [more]
A0A2P6ASG6_9GAMM2.670e-2856.32Type III effector (Fragment) n=1 Tax=Amnimonas aqu... [more]
A0A1Y5ELY6_9GAMM4.490e-2855.56Type III effector n=1 Tax=Cycloclasticus sp. 46_12... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038604Type III effector HopJ superfamilyGENE3D3.20.160.10coord: 161..282
e-value: 3.9E-38
score: 132.1
IPR014984HopJ type III effector proteinPFAMPF08888HopJcoord: 177..277
e-value: 2.4E-35
score: 121.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:399410..401811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1130.1mRNA_C-linearis_contig109.1130.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig109 398330..401875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig109.1130.1 ID=prot_C-linearis_contig109.1130.1|Name=mRNA_C-linearis_contig109.1130.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=286bp
MRSIAVLGAAVLTLVVRNAEAFFLPAGNLVGGGASPTSPVLTANSVSSSS
SSIVARAAARGSGCSCPSCNRGICGRSCRCPSCSKGLSARSHAAGCRCGA
CSVRMQAHPVGCGCGDCTPAPTAFHGSCCSCADCSYRSKAESCACSVCAS
RPGGRGSSSATVMRMGAGQVSETGEGLRARLVEEPGSVMFEEAMGAIEAG
FDYTPKRFENGVTSSGAGENEGSCKVFAFGKVAGLSPAETLACFGEHFRG
VLADPEGDSHGNIRAFMESGWDGVEFPDGLSLSPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038604HopJ_sf
IPR014984HopJ