prot_C-linearis_contig109.1117.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig109.1117.1
Unique Nameprot_C-linearis_contig109.1117.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length291
Homology
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BLAST of mRNA_C-linearis_contig109.1117.1 vs. uniprot
Match: A0A6H5L7T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T0_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.390e-137
Identity = 195/233 (83.69%), Postives = 218/233 (93.56%), Query Frame = 0 
Query:    1 LPLPGLHEHFGQA-LSYDKMTAGTAALDQECAMDPAMAELRQHLIRHQISFCVFDMDLTVTAKHTRGALPRDPDTMRSYLDSGRATDAVQTMKLCRALGLTIGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQDGYTKNDMIRALFERRGEPYSPGTTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILQHAKVVEPSCTFVPGMSFSTA 232
            +PLP L EHF  A +SY  MTAG AA++QECA+DPAMAELRQHL+RH+I+FCVFDMDLTVT  HTRGALPRDPDTMRSYL+SGRATDAV+TMKLCRALGLT+GIATFQREVDDS+HIGGSHLVRRVLGAIGAGDLVSDRDVVAL+ +QY+EM+RHQ+ YTKNDMIR LFERRGE YSPG TLLIDDTRRNVEAFVRIGGHGLLVEGGQGLIL++AKVVEPSCTFVPG++FS++
Sbjct:    9 VPLPALREHFATAFVSYPNMTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSS 241
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BLAST of mRNA_C-linearis_contig109.1117.1 vs. uniprot
Match: D8LKV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV2_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.330e-121
Identity = 173/198 (87.37%), Postives = 190/198 (95.96%), Query Frame = 0 
Query:   19 MTAGTAALDQECAMDPAMAELRQHLIRHQISFCVFDMDLTVTAKHTRGALPRDPDTMRSYLDSGRATDAVQTMKLCRALGLTIGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQDGYTKNDMIRALFERRGEPYSPGTTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILQHAKV 216
            MTAG AA++QECA+DPAMAELRQHL+RH+I+FCVFDMDLTVT  HTRGALPRDPDTMRSYL+SGRATDAV+TMKLCRALGLTIGIATFQREVDDS+HIGGSHLVRRVLGAIGAGDLVSDRDVVAL+ +QY+EM+RHQ+ YTKNDMIR LFERRGE YSPG TLLIDDTRRNVEAFVRIGGHGLLVEGGQGLIL++AK+
Sbjct:    1 MTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTIGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKI 198
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BLAST of mRNA_C-linearis_contig109.1117.1 vs. uniprot
Match: A0A835YLM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLM2_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.330e-53
Identity = 97/203 (47.78%), Postives = 135/203 (66.50%), Query Frame = 0 
Query:   19 MTAGTAALDQECAMDPAMAELRQHLIRHQISFCVFDMDLTVTAKHTRGALPR-DPDTMRSYLDSGRATDAVQTMKLCRALGLTIGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQDGYTKNDMIRALFERRGEPYSPGTTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILQHAKVVEPS 220
            MTAGTA      A D  +  +RQ+L  H I + VFDMDLTVT++H+ G L + D  T+ SY+DS R TDA+  ++LC  LG+ +G+ATFQ+EVDD++H+GG+ LVR+ L  +G  D + +  +VAL+  +Y  M+ +QD Y KNDM+R LFER G  + P  TLL+DDT RN+ AF  IGGHGL + G  G+ L +   V P+
Sbjct:    1 MTAGTAV-----AAD--LTAIRQYLQEHDIRYVVFDMDLTVTSEHSGGMLLKMDRMTLFSYMDSARDTDALAVIQLCAELGIRMGVATFQKEVDDAAHVGGTPLVRQALQRLGI-DAIEEGSIVALTREEYKVMVTNQDTYNKNDMLRTLFERWGVEFDPTHTLLVDDTVRNIRAFASIGGHGLAIHGHSGMQLDNVTFVSPA 195
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7T0_9PHAE1.390e-13783.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKV2_ECTSI1.330e-12187.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLM2_9STRA2.330e-5347.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 73..221
e-value: 3.6E-5
score: 25.5
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 80..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:295558..299717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1117.1mRNA_C-linearis_contig109.1117.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig109 295558..299717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig109.1117.1 ID=prot_C-linearis_contig109.1117.1|Name=mRNA_C-linearis_contig109.1117.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=291bp
LPLPGLHEHFGQALSYDKMTAGTAALDQECAMDPAMAELRQHLIRHQISF
CVFDMDLTVTAKHTRGALPRDPDTMRSYLDSGRATDAVQTMKLCRALGLT
IGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAE
MLRHQDGYTKNDMIRALFERRGEPYSPGTTLLIDDTRRNVEAFVRIGGHG
LLVEGGQGLILQHAKVVEPSCTFVPGMSFSTASPHATTTTGAAASAPHPH
QHHHQPHGAYPQQYHPQHHHQHHHQQHYPHQPPPPPAGYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf