prot_C-linearis_contig108.1056.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig108.1056.1
Unique Nameprot_C-linearis_contig108.1056.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1080
Homology
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI)

HSP 1 Score: 1239 bits (3205), Expect = 0.000e+0
Identity = 688/747 (92.10%), Postives = 712/747 (95.31%), Query Frame = 0
Query:    2 SQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHDRRWEAHLESHKKVRTSLKL---------RRGRRTWWTRR 739
            SQTWF+KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEK+ATNSRKKADQ+SLVEAAKVGDLEAEATPESIMLSTMTEEGEKER DREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ IG+KTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKF+SLGSEYNKTLT EAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALM+ELVKKGILAQVS DVLALYNIIETNFRPMSIVKD+MPHLETL+KAGGD+ASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIV+AVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP E+T++QQRA F+ QVVS M  EH+DALNRKNIIEKRKEE  XXXXXXXXXXXXXXXXXXXXXXXXXXX      KLREK K+QRIERELELQQTKEML RLGKKADNV+KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEE+PVL+KKYEAQVAADK EHD+RW+AHLESHKK     +L         RRGRRTWWT++
Sbjct:    4 SQTWFHKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKKATNSRKKADQMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-IGKKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMDELVKKGILAQVSPDVLALYNIIETNFRPMSIVKDAMPHLETLTKAGGDVASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLVRLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDKRWKAHLESHKKASRVSRLKDRRLQPPNRRGRRTWWTKK 749          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA)

HSP 1 Score: 775 bits (2002), Expect = 2.820e-262
Identity = 455/740 (61.49%), Postives = 553/740 (74.73%), Query Frame = 0
Query:    1 MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESAN----QLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD--LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLV-----KPV---------EKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHDRRWEAHLESHK 720
            MS TWF+KPE+ALKRANELIAI NK  ALELL  VF  RRYK WQ AYET+M+K++DLCV+LQ+HR+AKDGLHQYRNMAQQQAPGSLEVII +L+D +E RATN++ KA+ +S  E  ++GDLEAEA+PESIMLSTMTEEG KERTDRE+VVPWLKFLWE YRAVLDILKTNTKLEHVYH TCIKAFNFCRTY RTTE RRLCDTLRQHISNLQ+H+ A    RLRGWEGWTS+GIELHLQTRFAQLEVAA LELWTEGFRTVEDIYNIMQ IG+K PKARLMASYYEKLTRIF VSEN+LFHAYAWYK+Y+L  EYNK LT E +  QA CVLLAA++IP++++ SA       +++DDL+K+KNQRMATLLGF+TDPSR AL++ELV KG+LAQV   +  LY  +E +  P+SIVK + P  E L        L  Y   LER+VVLR+L  L+S+Y TV+L + + YL G+ + FQEVEKL+V+A K + ++V VD++ +CLRF   VME++ MR+QL++LA QL   V L+     K +         E  S   R SF+ +V S +  EH  AL RK +IEK      XXXXXXXXXXXXXXXXXXXXXXXXXXX           X          L +TK +L  LGKK +N++ +DK+ RE  I+  KD ++ EKE E+ R+K QAKR+DYI RA+R+EE PVL++K+ AQ  AD+ +H RR E +   H+
Sbjct:    1 MSTTWFHKPESALKRANELIAIGNKDGALELLQGVFAARRYKQWQKAYETLMIKFLDLCVELQRHREAKDGLHQYRNMAQQQAPGSLEVIITHLLDMSEGRATNAKMKANAISAEEVTQIGDLEAEASPESIMLSTMTEEGGKERTDREVVVPWLKFLWEAYRAVLDILKTNTKLEHVYHNTCIKAFNFCRTYARTTEFRRLCDTLRQHISNLQRHTGAAAATRLRGWEGWTSEGIELHLQTRFAQLEVAANLELWTEGFRTVEDIYNIMQ-IGKKVPKARLMASYYEKLTRIFLVSENHLFHAYAWYKYYTLSREYNKALTAEERTQQACCVLLAALAIPEVKARSAGGDGGAAYNDDDLTKEKNQRMATLLGFNTDPSRSALLQELVAKGLLAQVPPPLRLLYAQLEVSSSPLSIVKATAPAFEFLRAEANAAVLGVYCAQLERMVVLRMLEGLASIYQTVSLAKFKGYLAGLEMDFQEVEKLVVRAAKSKDIQVAVDYQVQCLRFTPAVMETEGMRSQLTSLARQLNDVVTLIGGFDAKGITDAGAIIVKEADSAAARHSFFAKVSSHVETEHAAALRRKEVIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAETKNVLKELGKKVENLETMDKAAREIAIKTAKDEILTEKEKEEKRMKDQAKRMDYIVRAMRMEEAPVLQQKFAAQQEADQADHARRVEEYRVKHR 739          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A6H5KVX7_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX7_9PHAE)

HSP 1 Score: 748 bits (1931), Expect = 8.350e-257
Identity = 418/487 (85.83%), Postives = 437/487 (89.73%), Query Frame = 0
Query:  218 AAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXX----RLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQ 700
            A QTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ IG+KTPKARLMASYYEKLTRIFWVSEN+LFHAYAWYKF+SLGSEYNKTLT EAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALM+ELVKKGILAQVS DVLALYNIIETNFRPM+IVKD+MPH+ETL+KAGGD+ASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIV+AVKQRQVKVTVDHKA CLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP E+T++QQRA F+ QVVS M  EH+DALNRKNIIEKRKEEAE     XXXXX                     RLAR  K    X       ELELQQTKEMLARLGKKADNV+KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEE+P+L+KKYEAQ
Sbjct:   10 ATQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-IGKKTPKARLMASYYEKLTRIFWVSENFLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMDELVKKGILAQVSPDVLALYNIIETNFRPMNIVKDAMPHIETLTKAGGDVASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKAGCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAERREQDXXXXXARRRGGVRQEEDLKRKAXXAARLARXXKXXXXXXXXXXXXELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPMLRKKYEAQ 495          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S2R6Z3_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z3_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 3.020e-185
Identity = 306/580 (52.76%), Postives = 408/580 (70.34%), Query Frame = 0
Query:    1 MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA---AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSES--ANQLFDEDDLSKQ--KNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP-----VEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEK 568
            M+   FNKPENALKRA E I I NK +AL LLH V + R+ +TWQ +YET+MLKY+DLCV+L+   + KDGLHQYRNM+Q QAPGSLEV++ + +D AE R   +   A+  +L EA ++ D+E   TPES+MLSTMT++ +++RTDR++++PWL FLWETYR+VLDILKTN+KLE VYH T  +AF FC  Y+R  E RRLCD LR H+SNLQK+++   A    RL+ W+GWT + IELHLQTRF QLE  A LELWTEGF+TVEDI+ IMQ I +K PKAR+MA YYEKL RIFWVSENYLFHAYAW+K+++L   +NK +T E +   A+CVLLAA+SIP +  ++  A + FD+   S    +NQ MA+LLGF   P+R  LM E++ + +L  V  +V  +Y  +E  F+P+ +VK  +P L+   K    L+ Y+  + R+VVLRLL QLSSVYHTV + +L   L+G+     EVEK+IV AVK +Q++  +DH   CL+FG  V+ESD+MR QL+TL++QLQ  V LV+P     V++   + RA F+  V   M  EH+  LNRKN IE+
Sbjct:    1 MANRLFNKPENALKRATEYINIGNKSSALNLLHEVLSFRKPRTWQKSYETVMLKYIDLCVELRDPIRGKDGLHQYRNMSQAQAPGSLEVVVTHFIDLAESRLAKAADTAEAAALREAERMTDIEQAGTPESVMLSTMTDDSDRKRTDRQILIPWLLFLWETYRSVLDILKTNSKLELVYHNTAARAFAFCEKYKRRLEFRRLCDLLRLHLSNLQKYASGPNAANDKRLKVWDGWTDESIELHLQTRFRQLETTAKLELWTEGFKTVEDIHGIMQ-INKKAPKARVMAMYYEKLQRIFWVSENYLFHAYAWFKYFTLSESHNKGMTNEERTELASCVLLAAMSIPGLEDQAVGAEKAFDDSTQSTALIRNQHMASLLGFHAHPARTHLMGEIMSRKLLDLVLPEVREMYENLEKRFQPLDLVKAMLPSLDFCRKHER-LSQYIKPISRLVVLRLLRQLSSVYHTVKISQLLDLLSGLNFEPNEVEKMIVVAVKAKQIQARLDHGKECLKFGDVVLESDNMRRQLTTLSSQLQTVVALVQPTGAVGVDEDKAKARARFFEVVRENMEKEHSSTLNRKNTIER 578          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A1Z5KQK7_FISSO (Eukaryotic translation initiation factor 3 subunit A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQK7_FISSO)

HSP 1 Score: 548 bits (1411), Expect = 2.770e-175
Identity = 332/743 (44.68%), Postives = 479/743 (64.47%), Query Frame = 0
Query:    8 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEA-EATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQT--TNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD------------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNV--DKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADK----KEHD-------RRWEAHLESHK 720
            KPE AL+RA EL  I  + AAL LLH V + RR +TW  AYE IM+ Y+DLC+ L + R+AKDGLHQYRN++Q QAPGSLE +I YL++QAE++   ++K A +L    A +  + E   A+P++I+LSTM+ +  K + D  +++P LKFLWETYRA+LDIL++N+KLE VYHA    A  FC+TY+R  E R LCD LR H+ NL+++       +N++RGWEGW+ D +ELHLQTRFAQLE A+ L  +TEGFRTVEDIYNI+Q   G+  PKA+LMA+YYEKLT +FWVSENYLFHA+AWYK+YSL  E+++ ++ E K  QA+ VLLAA+ IP   + +   +F +DD+ KQK  RMA LLGF T  P+RE L++E+  K +L QV   +  LYN++E    P+ +V+ + P L+ L K  G             L  YV  LE +++LRL+  L+  YHTV+L+ LQ   TG  ++F ++EK +V+  + + + V +DH+A CLRFG     + S  T L     Q+ K+++   P ++ SE QR      +   +  +HT  L RK +IEKRKE+AE                  XXXXXXXX R+ARE +LRE  K ++I++EL+ Q+ K  L  +GK  + +  +++ +   E L R+ ++ + K+KE+ + + K  AK+LDY+ RA+RIEE+P+++KKYE +V  D+    KE++       +RWE  +E+ K
Sbjct:   54 KPELALRRAQELREIRQEDAALALLHEVLSNRRNRTWSPAYEQIMITYLDLCLDLHKSREAKDGLHQYRNLSQSQAPGSLEKVIRYLMEQAERKCDEAQKFAMELESRTAEEDDEEEGFAASPQAILLSTMSTDPAKSQRDSTVLLPSLKFLWETYRAILDILRSNSKLEFVYHAAAQNALQFCQTYKRRMEFRHLCDMLRLHLGNLRQYGGDDDIKSNKIRGWEGWSQDSVELHLQTRFAQLETASVLHRYTEGFRTVEDIYNILQIGRGKTPPKAKLMAAYYEKLTTLFWVSENYLFHAFAWYKYYSLCREFHRGMSEEIKQRQASAVLLAALCIPPNYNSNGGGVF-QDDVMKQKMSRMAVLLGFHTRHPTREVLLQEIKSKNLLDQVPDYLRDLYNLLEQTQDPVIMVEQTQPLLQRLQKEVGSTYDQDTGIADNTLGRYVKPLENVLLLRLIVNLNQAYHTVSLDYLQRLTTG--MTFHQIEKSLVQFTQTKAITVRIDHRAGCLRFGATTDWNSSQLTVLGKSLEQVAKSIHPPAPTDRLSEYQR------IRESLDDDHTGLLKRKELIEKRKEQAERDVQEKLRLAAQRKAEEDXXXXXXXXKRIAREQRLRELEKXRKIQQELDNQEKKRFLTAMGKDTEAMTDEQISQIDTEALQREHQEKLNKKKEEAERKTKEVAKKLDYLVRAIRIEELPLIRKKYEEKVNHDRDLYEKENEEKVKIAKKRWEEDVEAKK 787          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: B7G0T8_PHATC (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0T8_PHATC)

HSP 1 Score: 541 bits (1395), Expect = 3.410e-172
Identity = 349/754 (46.29%), Postives = 494/754 (65.52%), Query Frame = 0
Query:    2 SQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKAD--QLSLVEAAKVGDLEA--EATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA------AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ--QIGQK------TPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQI-----RSESANQ----LFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGG---------------DLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSE-QQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNV--DKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 709
            +  +F+KPE AL+RA EL  I+   AAL +LH V ++RR++TW  A+E IM+ Y+DLC++L + R+AKDGLHQYRN++Q QAPGSLE +I YL+  AEK+ T ++  AD  Q  ++E    GD E    A+P++I+LSTM+ +  K + D  ++VP LKFLWETYRAVLDIL++N+KLEHVYH     A  FC+ Y+R  E R LCD LR H+ NL+++         +T N++RGWEGWT++ IELHLQTRF QLE A+ L  +TEGFRT EDI+NI+Q  Q  +K       PKA+LMASYYEKLT +FWVSENYLFHA+AWYK+Y+L  E+N+ ++ + K  QA+ VLLAA+ IP +     ++  +NQ       ED + KQK  RMATLLGF T +P+R+AL+ E+  KGIL Q  + +  LY ++E    P+ +V+ + P LE L +  G                L  YV  +  +++L+L+  LS+ YHTV+++ L++  +G+ LSF++VEK IV + K   V++  DH+A CLRFG   +ESD+MR+QL  L+ QLQ   N++ P ++ S  Q R S Y  V   +  EH   L RKN+IE RKEE E     XXXXXXXXXXXXXXXXXXXXXX           X   +I++EL+ Q+ K  LA +GKK +++  +++ K   E L R+ +  + KE+E+ + + +  AK+LDY+ RA+RIEE+P++KKKYE +   DK+ ++
Sbjct:    3 TSNFFHKPELALRRAQELEGIHQDDAALAMLHEVLSSRRHRTWSPAFEQIMIVYVDLCLKLYKTREAKDGLHQYRNLSQTQAPGSLEKVIRYLLTAAEKKCTEAKASADAQQDQILEENGNGDDEDGFRASPQAILLSTMSTDPAKSQRDSALLVPSLKFLWETYRAVLDILRSNSKLEHVYHFAAQSALQFCQDYKRRMEFRNLCDMLRLHLGNLRQYGNLDANDDGKTNNKVRGWEGWTTESIELHLQTRFIQLETASVLHRYTEGFRTCEDIFNILQISQARRKHNPDVPAPKAKLMASYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSEDTKRMQASAVLLAALCIPSVPANESKASHSNQHTIATTVEDGIVKQKMARMATLLGFHTRNPTRDALLAEIRSKGILEQAPAYLRELYELLEETNDPLIMVQKAKPLLEQLQQELGATTSNDVKNDDVDDTTLGRYVKPITNVLLLKLIRNLSAAYHTVSMDHLKSLTSGLDLSFEQVEKTIVTSSKTLAVRL--DHRAGCLRFGNVQLESDAMRSQLVNLSKQLQAVSNVLTPPDRQSVLQSRLSTYQSVRENLHAEHAAVLERKNLIETRKEETERVAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQQELDNQEKKRFLAAMGKKTEDISEEQIAKIDTEALQREHEAKINKEREEAERKTRETAKKLDYLVRAIRIEELPLIKKKYEEKTKLDKERYE 754          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: F0XXZ4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXZ4_AURAN)

HSP 1 Score: 524 bits (1350), Expect = 1.940e-170
Identity = 299/603 (49.59%), Postives = 395/603 (65.51%), Query Frame = 0
Query:    8 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAK-VGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKT-LTPEAKVTQANCVLLAAISIPQI-------RSESANQLFD-----EDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVS---SDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKA---VKQRQVKVTVDHKARCLRFGGEVMESDSM-------RTQLSTLATQLQKAVNLVKPV---------EKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAE 574
            KPENALKRANEL  I NK AAL++LH V T ++ +TW   +E+IM +Y+D+CV+LQ HR AKDGLHQYRN++QQQAP SLEV+I YLV  AE RA  +   A + +L  AAK V DL+ E TPESIM+STMT+EG+ ER++RE +VPWLKFLWETYR+VLDIL+TN+KLE VYH T +KAF FCR +ER TELRRLC+TLRQH+SNLQ+ +A   T+RLRGWEGWT +G+E+HL TRFAQLEVA+ LELWTEGFRTVEDI+ IM+ I +K PKA+LMA YYE+LT+IFWVS N+LFHA+AW++   L  E  K   TPE +  +A  VLLAA++IP         R  +   L D     EDD+  +KN RMATLLGF+T P+R AL+ EL   G L       + V  LY+ +E+ F P+ +     P L+ L+     LA +   L R+ V RL+AQL  VY  VTL+  ++ L  + L + +VEKL+V A   VK       +D++ +CLRF       D         R  LS    ++ +A++ ++ V         ++ +E++R   +         +H   L RK +IE+RKEE E
Sbjct:    2 KPENALKRANELATIGNKKAALQVLHDVLTAKKSRTWVKVFESIMFRYIDICVELQMHRHAKDGLHQYRNISQQQAPQSLEVVIQYLVKAAETRAYEAAAAAKKANLAAAAKSVADLDCEQTPESIMMSTMTDEGDGERSEREALVPWLKFLWETYRSVLDILRTNSKLEKVYHGTSVKAFEFCRKFERKTELRRLCETLRQHLSNLQRAAATNNTSRLRGWEGWTQEGVEMHLTTRFAQLEVASALELWTEGFRTVEDIHQIMR-ISKKPPKAKLMAKYYERLTKIFWVSGNHLFHAFAWWRHAQLAKEAEKRPATPEERSHRACAVLLAALAIPDAGNAGGGPREVAGFGLGDADRSPEDDVDAEKNARMATLLGFATHPTRSALLAELTVNGALVDADLLPAHVTELYDALESRFEPLRLAAIVKPLLDRLATETPRLAHFAEPLARLAVCRLVAQLGEVYSCVTLDHFKSLLGDLPLDYDDVEKLLVGATPTVKGAAPVARLDYRRKCLRFSSAPRGGDRPSAVAGGGRDTLSVFGFKVDEALDHIRKVTAPPPEVLAKRAAERER--LFAAARDSADADHEKCLARKAVIERRKEEQE 601          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: B8C1C2_THAPS (Eukaryotic translation initiation factor 3, subunit 10 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C2_THAPS)

HSP 1 Score: 532 bits (1370), Expect = 6.640e-170
Identity = 340/741 (45.88%), Postives = 478/741 (64.51%), Query Frame = 0
Query:    8 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEA---TPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ---QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSE--SANQLFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETL-----------SKAGGD--------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSE-QQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIER--------ELELQQTKEMLARLGKKADN--VDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 709
            KPE AL+RA ELI+IN   AAL LLH V ++RR+KTW T YE I++ Y+DLC+QL + R+AKDGLHQYRN++Q QAPGSLE++I +L+D   K A      A  ++  +  +  D + +A    P+SIMLSTM+ + EK + D  +++P LKFLWE YRAVLDILK+N+KLE +YH++   A  FC  Y+R  E RRLCD +R H+ NLQK+        +RGWEGWT++ IELHLQTRF QL+VA+ L L+TEGFRTVEDIYNI+Q    +    PKA++MA+YYEKLT +FWVSENYLFHA+AWYK+YSL  EYN+ ++ E +  QA+ V+LAA+ IP+  S+    N    EDD++K+K  RMATLLGF T +PSREA++ E+  K I+  V   +  LY I+E +  P+ +V+ + P LE L           + AG D        L  YV  L  +++LRL++ L++ YHT++L+ ++   TG+ +SF+++EK IV + + R + V +DH+A C+RFG   +ES+ MR QLSTLA +L  A N++ P +      +RA+ Y  V S +  EH   L RK +IEKRKEEAE      XXXXXXXXXXXXXXXXXXXXX           XK+Q+I+         E++  + K  L  +G+  +N  VD+L +     L ++  +   K+K          A++LDY+ RA+RIEE+P +K +YE ++  DK+ ++
Sbjct:    1 KPETALRRAEELISINQPNAALALLHEVLSSRRHKTWSTTYEKIIILYLDLCLQLNRSREAKDGLHQYRNLSQSQAPGSLELVIRHLIDS--KAADKGEDIAPFIAGDKPTETIDGDDDAFFDAPQSIMLSTMSTDPEKVQRDTAVLLPALKFLWEVYRAVLDILKSNSKLEKLYHSSAQSALKFCGEYKRRVEFRRLCDMMRMHLGNLQKYGG------VRGWEGWTAESIELHLQTRFVQLDVASSLRLYTEGFRTVEDIYNILQISRALNIPPPKAKIMAAYYEKLTSLFWVSENYLFHAFAWYKYYSLCKEYNRGMSAEMRTMQASAVVLAALCIPKTTSDIKGRNMSTVEDDIAKEKMARMATLLGFHTREPSREAILSEIRAKNIMDDVPEYLRELYVILEDSTDPLDMVEKARPLLEKLRAETGVTSDAPASAGEDEDDADDNTLGRYVQPLTNVLLLRLISNLAAAYHTISLDHVKNLTTGLGVSFEQIEKSIVLSTQSRVLSVRIDHRAGCIRFGNAALESNEMRGQLSTLAKRLTTACNIISPPDVAPVVSERAALYAHVRSTLESEHIATLERKIVIEKRKEEAERIVQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQKIQDGECDLDGGEMDAMEKKRYLTAMGRNVENMTVDQLKEVDTAALAKEHAEKANKKKXXXXXXXXXXARQLDYLVRAVRIEELPQIKSEYEKKIKEDKENYE 733          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S3PZF8_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZF8_9STRA)

HSP 1 Score: 536 bits (1381), Expect = 7.870e-170
Identity = 309/758 (40.77%), Postives = 471/758 (62.14%), Query Frame = 0
Query:    4 TWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKA----DQLSLVEAAKV-GDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA----------AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQI--------GQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQI--RSESANQLFD---------EDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETL-----SKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQ---VKVTVDHKARCLRFGG------EVMESDSMRTQLSTLATQLQKAVNLVKPVEKTS-EQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVD--KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 709
            +W  +PENA +RA ELI I    +AL +LH V + RR +TW   +E IM+ Y+DLC+ L + R+AKDGLHQYRN++Q QAPGSLE ++ YL++Q+E +   +++      D++  V AA +  D  +  T   ++LST+T +  + + +  +++P +KFLWE YRAVLDILK+N+KLE +YH T  +A NFC  Y+R  E +RLCD LR H+ NLQK+ +           +  NR+RGWEGWTS+ IELHLQTRF QLE A+ L L+TEGFRTVEDI+NI+Q          G   PKA++MA+YYEKLT +FWVSENYLFHA+AWYKFY+L  EYN+ +T E K  QA+ VLL+A+ IP +  ++ SA Q  D         +DD++K+K  RMATLLGF T +P+REAL+ E+    ++A V   +  LY ++E N  P+ +V+ + P L+ L     + A G L +YV  +  +++L+L+  LS+ YHT++L+ +++   G+ ++F +VEK I+     +    ++V +DH+A CLRFG          ESD+MR+QL+ L+ QL +  N++ P +  S +  R + Y  V   +  EH+D L RK++IE RKEE E                           RL RE  LREK K  +I++E+E+ + K++L  +G+  + +   +L     ++L+++      K+K++ + ++K   ++LDYI RA RIEE+P++K + E ++ +DK+ ++
Sbjct:    2 SWNQQPENAFRRAQELINIAQPESALNILHEVISNRRNRTWSLTHEQIMITYIDLCLTLNKTREAKDGLHQYRNLSQSQAPGSLEKVVKYLIEQSELKCLEAKELTSGGDDKVVPVAAADLDNDAASPDTNNMMLLSTLTADPAQNQLESTLLIPRIKFLWEAYRAVLDILKSNSKLERLYHLTAGRALNFCSEYKRNVEFKRLCDLLRMHLQNLQKYGSFAAMAKIEEGGKPNNRVRGWEGWTSESIELHLQTRFTQLETASTLHLYTEGFRTVEDIFNILQISNSRRKVAGGSAAPKAKIMAAYYEKLTTLFWVSENYLFHAFAWYKFYTLCREYNRGMTVEQKTQQASAVLLSALCIPSLPDKAASAQQSDDGAAKIKATIKDDIAKEKTARMATLLGFHTRNPTREALLSEIRANNVMADVPDYLRDLYKVLEENVNPLVLVQRARPLLDRLRSEVDTSATGSLNTYVEPIISVLLLKLMHSLSASYHTISLDHIKSLTDGLGVTFTQVEKAIISTATHKNTTPLRVRIDHRANCLRFGDISGSSDAQFESDAMRSQLTILSKQLHRVCNVINPPDLASIDSDRQALYANVRDIVDQEHSDLLQRKDLIETRKEETERLAQEELKEKETKRIEAITNAKAEEQRRLVREQHLREKEKQDKIKKEMEMTEKKKILKAMGQNVETMTATELTTIDADKLVKEHAAKAAKKKDNAERKVKEVQRKLDYIVRATRIEEVPLIKSRREEKLKSDKESYE 759          
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S4R7B1_9STRA (Eukaryotic translation initiation factor 3 subunit A n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7B1_9STRA)

HSP 1 Score: 532 bits (1371), Expect = 1.650e-168
Identity = 292/626 (46.65%), Postives = 406/626 (64.86%), Query Frame = 0
Query:    4 TWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKAD-----QLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAA---------QTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ---------QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDED---------------DLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD---------------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQ-RASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAE 574
            T+F+KPENAL+RA EL +I+   AAL LLH V ++RR+KTW   YE IM+ Y++LC+ L + R+AKDGLHQYRN++Q QAPGSLE +I YL+D AEK+   ++ +AD       + VE  ++ DL+  +TP+SI+LSTM+ + EK + D  +++P LKFLWETYRAVLDIL++N+KLE +YH   + A  FCR Y R TE RRLCD LR H+ NLQK+ +          +  N++RGWEGWT++ IELHLQTRFAQLE A+ L L+TEGFRTVEDIYNI+Q          +    PKA+LMA+YYEKLT +FWVSENYLFHA+AWYK+Y+L  E+N+ ++ E +  QA+ VLLAA+ IP +     +Q   ED               D++K+K  RMATLLGF T  P+REAL+ E+  + I+  V   +  LY+++E N  P+ +V  + P LE L    G                LA YV  L  +++L+LL  LS+ YHTV+L+ +++  +G+ ++FQ+VEKLIV +   ++  V +DH+A CLRFG   +ESD+MR QL++L+ QL      + P ++  +   R   Y  V + +  EH   L RKN+IEKRKEE E
Sbjct:    6 TFFHKPENALRRAQELESISQPTAALTLLHDVLSSRRHKTWSPTYEQIMITYLNLCLSLNKSREAKDGLHQYRNLSQSQAPGSLENVIRYLIDAAEKKCKTAKAEADARGAASATAVEEDEIDDLDNASTPQSILLSTMSVDPEKTQRDSALLLPSLKFLWETYRAVLDILRSNSKLERLYHGAALGALKFCREYRRRTEFRRLCDMLRMHLGNLQKYGSGVVPGVEEGGKPNNKVRGWEGWTTESIELHLQTRFAQLETASVLHLYTEGFRTVEDIYNILQISHSRRKIPGVAAPPPKAKLMAAYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSVEMRQMQASAVLLAALCIPTVSETQKSQKKKEDAIDAQRHHIQSTVEDDIAKEKMARMATLLGFHTRHPTREALLHEIQSRNIMEDVPDYLRDLYSLLEANSDPLVMVATARPLLEKLRAEVGSTNASMEEDEDSDDSTLARYVRPLTSVLLLKLLTNLSTAYHTVSLDHIKSLTSGLGVTFQQVEKLIVLSTHSKKFSVRIDHRAGCLRFGDADLESDAMRGQLTSLSKQLSSVCRFITPPDEVHQMAIREQLYSDVRASVENEHAAMLERKNLIEKRKEETE 631          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL6_ECTSI0.000e+092.10Eukaryotic translation initiation factor 3 subunit... [more]
A0A836CG33_9STRA2.820e-26261.49Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KVX7_9PHAE8.350e-25785.83PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2R6Z3_9STRA3.020e-18552.76Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5KQK7_FISSO2.770e-17544.68Eukaryotic translation initiation factor 3 subunit... [more]
B7G0T8_PHATC3.410e-17246.29Eukaryotic translation initiation factor 3 subunit... [more]
F0XXZ4_AURAN1.940e-17049.59PCI domain-containing protein (Fragment) n=1 Tax=A... [more]
B8C1C2_THAPS6.640e-17045.88Eukaryotic translation initiation factor 3, subuni... [more]
A0A7S3PZF8_9STRA7.870e-17040.77Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4R7B1_9STRA1.650e-16846.65Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableCOILSCoilCoilcoord: 556..628
NoneNo IPR availableSMARTSM00753PINTcoord: 433..526
e-value: 1.0E-8
score: 45.0
NoneNo IPR availableGENE3D1.25.40.860coord: 356..486
e-value: 8.3E-15
score: 57.1
coord: 279..355
e-value: 1.1E-19
score: 72.9
NoneNo IPR availableGENE3D4.10.860.10coord: 232..278
e-value: 3.1E-15
score: 57.4
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 433..526
e-value: 1.0E-8
score: 45.0
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 430..503
e-value: 9.2E-12
score: 45.4
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 302..507
score: 15.319
IPR027512Eukaryotic translation initiation factor 3 subunit APANTHERPTHR14005EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNITcoord: 1..723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig108contigC-linearis_contig108:22139..43843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig108.1056.1mRNA_C-linearis_contig108.1056.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig108 22045..44767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig108.1056.1 ID=prot_C-linearis_contig108.1056.1|Name=mRNA_C-linearis_contig108.1056.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1080bp
MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYET
IMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEK
RATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREM
VVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELR
RLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVA
AGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENY
LFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQ
LFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLAL
YNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQL
SSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCL
RFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVS
GMAVEHTDALNRKNIIEKRKEEAERREQDKTREEARVRMEEDAKRKSEET
ARLAREAKLREKEKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGRE
ELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQ
VAADKKEHDRRWEAHLESHKKVRTSLKLRRGRRTWWTRRPWATCTRTPRC
SSPASWRPGRPSTPPRSWPQRNVPGHTASRRRPSVLWPACARPRRRPSWR
GRRRNAKSGRRKRHRAGKRWRLSAGLRRRKPRRREQRNRKSATRSVPLAA
SAPKKSTAAMTTAPAATTTMTTAPQAAGARPAPPAAGAEAEAAAGLTTGS
AAAGAAVVTTASRPLVAVTWVAATVTVDREAPETWAGSVTSRAVGAVPVE
ALAAVAAAAAGALATEGGAGATWTEIAAEVAAAAAMMPEEADGAAGTPAA
EGSTAATMAGAAVEGLTAAIAMTGAAVEGLTAAIAMTGAAVEGLTAAIAM
TGDSAAAGTVGGTALLRCRRGLCAVKAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR027512EIF3A