mRNA_C-linearis_contig108.1056.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI) HSP 1 Score: 1238 bits (3204), Expect = 0.000e+0 Identity = 688/747 (92.10%), Postives = 712/747 (95.31%), Query Frame = 2
Query: 98 SQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHDRRWEAHLESHKKVRTSLKL---------RRGRRTWWTRR 2311
SQTWF+KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEK+ATNSRKKADQ+SLVEAAKVGDLEAEATPESIMLSTMTEEGEKER DREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ IG+KTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKF+SLGSEYNKTLT EAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALM+ELVKKGILAQVS DVLALYNIIETNFRPMSIVKD+MPHLETL+KAGGD+ASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIV+AVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP E+T++QQRA F+ QVVS M EH+DALNRKNIIEKRKEE XXXXXXXXXXXXXXXXXXXXXXXXXXX KLREK K+QRIERELELQQTKEML RLGKKADNV+KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEE+PVL+KKYEAQVAADK EHD+RW+AHLESHKK +L RRGRRTWWT++
Sbjct: 4 SQTWFHKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKKATNSRKKADQMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-IGKKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMDELVKKGILAQVSPDVLALYNIIETNFRPMSIVKDAMPHLETLTKAGGDVASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLREKEKIQRIERELELQQTKEMLVRLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPVLRKKYEAQVAADKLEHDKRWKAHLESHKKASRVSRLKDRRLQPPNRRGRRTWWTKK 749
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA) HSP 1 Score: 775 bits (2001), Expect = 1.170e-257 Identity = 455/740 (61.49%), Postives = 553/740 (74.73%), Query Frame = 2
Query: 95 MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESAN----QLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD--LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLV-----KPV---------EKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHDRRWEAHLESHK 2254
MS TWF+KPE+ALKRANELIAI NK ALELL VF RRYK WQ AYET+M+K++DLCV+LQ+HR+AKDGLHQYRNMAQQQAPGSLEVII +L+D +E RATN++ KA+ +S E ++GDLEAEA+PESIMLSTMTEEG KERTDRE+VVPWLKFLWE YRAVLDILKTNTKLEHVYH TCIKAFNFCRTY RTTE RRLCDTLRQHISNLQ+H+ A RLRGWEGWTS+GIELHLQTRFAQLEVAA LELWTEGFRTVEDIYNIMQ IG+K PKARLMASYYEKLTRIF VSEN+LFHAYAWYK+Y+L EYNK LT E + QA CVLLAA++IP++++ SA +++DDL+K+KNQRMATLLGF+TDPSR AL++ELV KG+LAQV + LY +E + P+SIVK + P E L L Y LER+VVLR+L L+S+Y TV+L + + YL G+ + FQEVEKL+V+A K + ++V VD++ +CLRF VME++ MR+QL++LA QL V L+ K + E S R SF+ +V S + EH AL RK +IEK XXXXXXXXXXXXXXXXXXXXXXXXXXX X L +TK +L LGKK +N++ +DK+ RE I+ KD ++ EKE E+ R+K QAKR+DYI RA+R+EE PVL++K+ AQ AD+ +H RR E + H+
Sbjct: 1 MSTTWFHKPESALKRANELIAIGNKDGALELLQGVFAARRYKQWQKAYETLMIKFLDLCVELQRHREAKDGLHQYRNMAQQQAPGSLEVIITHLLDMSEGRATNAKMKANAISAEEVTQIGDLEAEASPESIMLSTMTEEGGKERTDREVVVPWLKFLWEAYRAVLDILKTNTKLEHVYHNTCIKAFNFCRTYARTTEFRRLCDTLRQHISNLQRHTGAAAATRLRGWEGWTSEGIELHLQTRFAQLEVAANLELWTEGFRTVEDIYNIMQ-IGKKVPKARLMASYYEKLTRIFLVSENHLFHAYAWYKYYTLSREYNKALTAEERTQQACCVLLAALAIPEVKARSAGGDGGAAYNDDDLTKEKNQRMATLLGFNTDPSRSALLQELVAKGLLAQVPPPLRLLYAQLEVSSSPLSIVKATAPAFEFLRAEANAAVLGVYCAQLERMVVLRMLEGLASIYQTVSLAKFKGYLAGLEMDFQEVEKLVVRAAKSKDIQVAVDYQVQCLRFTPAVMETEGMRSQLTSLARQLNDVVTLIGGFDAKGITDAGAIIVKEADSAAARHSFFAKVSSHVETEHAAALRRKEVIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAETKNVLKELGKKVENLETMDKAAREIAIKTAKDEILTEKEKEEKRMKDQAKRMDYIVRAMRMEEAPVLQQKFAAQQEADQADHARRVEEYRVKHR 739
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A6H5KVX7_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX7_9PHAE) HSP 1 Score: 748 bits (1931), Expect = 2.050e-252 Identity = 418/487 (85.83%), Postives = 437/487 (89.73%), Query Frame = 2
Query: 746 AAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXX----RLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQ 2194
A QTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ IG+KTPKARLMASYYEKLTRIFWVSEN+LFHAYAWYKF+SLGSEYNKTLT EAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALM+ELVKKGILAQVS DVLALYNIIETNFRPM+IVKD+MPH+ETL+KAGGD+ASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIV+AVKQRQVKVTVDHKA CLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP E+T++QQRA F+ QVVS M EH+DALNRKNIIEKRKEEAE XXXXX RLAR K X ELELQQTKEMLARLGKKADNV+KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEE+P+L+KKYEAQ
Sbjct: 10 ATQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-IGKKTPKARLMASYYEKLTRIFWVSENFLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFSTDPSREALMDELVKKGILAQVSPDVLALYNIIETNFRPMNIVKDAMPHIETLTKAGGDVASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVRAVKQRQVKVTVDHKAGCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPAEQTTQQQRAGFFSQVVSDMPREHSDALNRKNIIEKRKEEAERREQDXXXXXARRRGGVRQEEDLKRKAXXAARLARXXKXXXXXXXXXXXXELELQQTKEMLARLGKKADNVEKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEELPMLRKKYEAQ 495
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S2R6Z3_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z3_9STRA) HSP 1 Score: 575 bits (1481), Expect = 2.300e-181 Identity = 306/580 (52.76%), Postives = 408/580 (70.34%), Query Frame = 2
Query: 95 MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA---AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSES--ANQLFDEDDLSKQ--KNQRMATLLGFSTDPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKP-----VEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEK 1798
M+ FNKPENALKRA E I I NK +AL LLH V + R+ +TWQ +YET+MLKY+DLCV+L+ + KDGLHQYRNM+Q QAPGSLEV++ + +D AE R + A+ +L EA ++ D+E TPES+MLSTMT++ +++RTDR++++PWL FLWETYR+VLDILKTN+KLE VYH T +AF FC Y+R E RRLCD LR H+SNLQK+++ A RL+ W+GWT + IELHLQTRF QLE A LELWTEGF+TVEDI+ IMQ I +K PKAR+MA YYEKL RIFWVSENYLFHAYAW+K+++L +NK +T E + A+CVLLAA+SIP + ++ A + FD+ S +NQ MA+LLGF P+R LM E++ + +L V +V +Y +E F+P+ +VK +P L+ K L+ Y+ + R+VVLRLL QLSSVYHTV + +L L+G+ EVEK+IV AVK +Q++ +DH CL+FG V+ESD+MR QL+TL++QLQ V LV+P V++ + RA F+ V M EH+ LNRKN IE+
Sbjct: 1 MANRLFNKPENALKRATEYINIGNKSSALNLLHEVLSFRKPRTWQKSYETVMLKYIDLCVELRDPIRGKDGLHQYRNMSQAQAPGSLEVVVTHFIDLAESRLAKAADTAEAAALREAERMTDIEQAGTPESVMLSTMTDDSDRKRTDRQILIPWLLFLWETYRSVLDILKTNSKLELVYHNTAARAFAFCEKYKRRLEFRRLCDLLRLHLSNLQKYASGPNAANDKRLKVWDGWTDESIELHLQTRFRQLETTAKLELWTEGFKTVEDIHGIMQ-INKKAPKARVMAMYYEKLQRIFWVSENYLFHAYAWFKYFTLSESHNKGMTNEERTELASCVLLAAMSIPGLEDQAVGAEKAFDDSTQSTALIRNQHMASLLGFHAHPARTHLMGEIMSRKLLDLVLPEVREMYENLEKRFQPLDLVKAMLPSLDFCRKHER-LSQYIKPISRLVVLRLLRQLSSVYHTVKISQLLDLLSGLNFEPNEVEKMIVVAVKAKQIQARLDHGKECLKFGDVVLESDNMRRQLTTLSSQLQTVVALVQPTGAVGVDEDKAKARARFFEVVRENMEKEHSSTLNRKNTIER 578
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A1Z5KQK7_FISSO (Eukaryotic translation initiation factor 3 subunit A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQK7_FISSO) HSP 1 Score: 548 bits (1411), Expect = 1.090e-171 Identity = 332/743 (44.68%), Postives = 479/743 (64.47%), Query Frame = 2
Query: 116 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEA-EATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQT--TNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ-QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD------------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNV--DKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADK----KEHD-------RRWEAHLESHK 2254
KPE AL+RA EL I + AAL LLH V + RR +TW AYE IM+ Y+DLC+ L + R+AKDGLHQYRN++Q QAPGSLE +I YL++QAE++ ++K A +L A + + E A+P++I+LSTM+ + K + D +++P LKFLWETYRA+LDIL++N+KLE VYHA A FC+TY+R E R LCD LR H+ NL+++ +N++RGWEGW+ D +ELHLQTRFAQLE A+ L +TEGFRTVEDIYNI+Q G+ PKA+LMA+YYEKLT +FWVSENYLFHA+AWYK+YSL E+++ ++ E K QA+ VLLAA+ IP + + +F +DD+ KQK RMA LLGF T P+RE L++E+ K +L QV + LYN++E P+ +V+ + P L+ L K G L YV LE +++LRL+ L+ YHTV+L+ LQ TG ++F ++EK +V+ + + + V +DH+A CLRFG + S T L Q+ K+++ P ++ SE QR + + +HT L RK +IEKRKE+AE XXXXXXXX R+ARE +LRE K ++I++EL+ Q+ K L +GK + + +++ + E L R+ ++ + K+KE+ + + K AK+LDY+ RA+RIEE+P+++KKYE +V D+ KE++ +RWE +E+ K
Sbjct: 54 KPELALRRAQELREIRQEDAALALLHEVLSNRRNRTWSPAYEQIMITYLDLCLDLHKSREAKDGLHQYRNLSQSQAPGSLEKVIRYLMEQAERKCDEAQKFAMELESRTAEEDDEEEGFAASPQAILLSTMSTDPAKSQRDSTVLLPSLKFLWETYRAILDILRSNSKLEFVYHAAAQNALQFCQTYKRRMEFRHLCDMLRLHLGNLRQYGGDDDIKSNKIRGWEGWSQDSVELHLQTRFAQLETASVLHRYTEGFRTVEDIYNILQIGRGKTPPKAKLMAAYYEKLTTLFWVSENYLFHAFAWYKYYSLCREFHRGMSEEIKQRQASAVLLAALCIPPNYNSNGGGVF-QDDVMKQKMSRMAVLLGFHTRHPTREVLLQEIKSKNLLDQVPDYLRDLYNLLEQTQDPVIMVEQTQPLLQRLQKEVGSTYDQDTGIADNTLGRYVKPLENVLLLRLIVNLNQAYHTVSLDYLQRLTTG--MTFHQIEKSLVQFTQTKAITVRIDHRAGCLRFGATTDWNSSQLTVLGKSLEQVAKSIHPPAPTDRLSEYQR------IRESLDDDHTGLLKRKELIEKRKEQAERDVQEKLRLAAQRKAEEDXXXXXXXXKRIAREQRLRELEKXRKIQQELDNQEKKRFLTAMGKDTEAMTDEQISQIDTEALQREHQEKLNKKKEEAERKTKEVAKKLDYLVRAIRIEELPLIRKKYEEKVNHDRDLYEKENEEKVKIAKKRWEEDVEAKK 787
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: B7G0T8_PHATC (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0T8_PHATC) HSP 1 Score: 541 bits (1394), Expect = 1.740e-168 Identity = 349/754 (46.29%), Postives = 494/754 (65.52%), Query Frame = 2
Query: 98 SQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKAD--QLSLVEAAKVGDLEA--EATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA------AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ--QIGQK------TPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQI-----RSESANQ----LFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGG---------------DLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSE-QQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNV--DKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 2221
+ +F+KPE AL+RA EL I+ AAL +LH V ++RR++TW A+E IM+ Y+DLC++L + R+AKDGLHQYRN++Q QAPGSLE +I YL+ AEK+ T ++ AD Q ++E GD E A+P++I+LSTM+ + K + D ++VP LKFLWETYRAVLDIL++N+KLEHVYH A FC+ Y+R E R LCD LR H+ NL+++ +T N++RGWEGWT++ IELHLQTRF QLE A+ L +TEGFRT EDI+NI+Q Q +K PKA+LMASYYEKLT +FWVSENYLFHA+AWYK+Y+L E+N+ ++ + K QA+ VLLAA+ IP + ++ +NQ ED + KQK RMATLLGF T +P+R+AL+ E+ KGIL Q + + LY ++E P+ +V+ + P LE L + G L YV + +++L+L+ LS+ YHTV+++ L++ +G+ LSF++VEK IV + K V++ DH+A CLRFG +ESD+MR+QL L+ QLQ N++ P ++ S Q R S Y V + EH L RKN+IE RKEE E XXXXXXXXXXXXXXXXXXXXXX X +I++EL+ Q+ K LA +GKK +++ +++ K E L R+ + + KE+E+ + + + AK+LDY+ RA+RIEE+P++KKKYE + DK+ ++
Sbjct: 3 TSNFFHKPELALRRAQELEGIHQDDAALAMLHEVLSSRRHRTWSPAFEQIMIVYVDLCLKLYKTREAKDGLHQYRNLSQTQAPGSLEKVIRYLLTAAEKKCTEAKASADAQQDQILEENGNGDDEDGFRASPQAILLSTMSTDPAKSQRDSALLVPSLKFLWETYRAVLDILRSNSKLEHVYHFAAQSALQFCQDYKRRMEFRNLCDMLRLHLGNLRQYGNLDANDDGKTNNKVRGWEGWTTESIELHLQTRFIQLETASVLHRYTEGFRTCEDIFNILQISQARRKHNPDVPAPKAKLMASYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSEDTKRMQASAVLLAALCIPSVPANESKASHSNQHTIATTVEDGIVKQKMARMATLLGFHTRNPTRDALLAEIRSKGILEQAPAYLRELYELLEETNDPLIMVQKAKPLLEQLQQELGATTSNDVKNDDVDDTTLGRYVKPITNVLLLKLIRNLSAAYHTVSMDHLKSLTSGLDLSFEQVEKTIVTSSKTLAVRL--DHRAGCLRFGNVQLESDAMRSQLVNLSKQLQAVSNVLTPPDRQSVLQSRLSTYQSVRENLHAEHAAVLERKNLIETRKEETERVAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQQELDNQEKKRFLAAMGKKTEDISEEQIAKIDTEALQREHEAKINKEREEAERKTRETAKKLDYLVRAIRIEELPLIKKKYEEKTKLDKERYE 754
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: F0XXZ4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXZ4_AURAN) HSP 1 Score: 524 bits (1350), Expect = 5.620e-167 Identity = 299/603 (49.59%), Postives = 395/603 (65.51%), Query Frame = 2
Query: 116 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAK-VGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKT-LTPEAKVTQANCVLLAAISIPQI-------RSESANQLFD-----EDDLSKQKNQRMATLLGFSTDPSREALMEELVKKGILAQVS---SDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKA---VKQRQVKVTVDHKARCLRFGGEVMESDSM-------RTQLSTLATQLQKAVNLVKPV---------EKTSEQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAE 1816
KPENALKRANEL I NK AAL++LH V T ++ +TW +E+IM +Y+D+CV+LQ HR AKDGLHQYRN++QQQAP SLEV+I YLV AE RA + A + +L AAK V DL+ E TPESIM+STMT+EG+ ER++RE +VPWLKFLWETYR+VLDIL+TN+KLE VYH T +KAF FCR +ER TELRRLC+TLRQH+SNLQ+ +A T+RLRGWEGWT +G+E+HL TRFAQLEVA+ LELWTEGFRTVEDI+ IM+ I +K PKA+LMA YYE+LT+IFWVS N+LFHA+AW++ L E K TPE + +A VLLAA++IP R + L D EDD+ +KN RMATLLGF+T P+R AL+ EL G L + V LY+ +E+ F P+ + P L+ L+ LA + L R+ V RL+AQL VY VTL+ ++ L + L + +VEKL+V A VK +D++ +CLRF D R LS ++ +A++ ++ V ++ +E++R + +H L RK +IE+RKEE E
Sbjct: 2 KPENALKRANELATIGNKKAALQVLHDVLTAKKSRTWVKVFESIMFRYIDICVELQMHRHAKDGLHQYRNISQQQAPQSLEVVIQYLVKAAETRAYEAAAAAKKANLAAAAKSVADLDCEQTPESIMMSTMTDEGDGERSEREALVPWLKFLWETYRSVLDILRTNSKLEKVYHGTSVKAFEFCRKFERKTELRRLCETLRQHLSNLQRAAATNNTSRLRGWEGWTQEGVEMHLTTRFAQLEVASALELWTEGFRTVEDIHQIMR-ISKKPPKAKLMAKYYERLTKIFWVSGNHLFHAFAWWRHAQLAKEAEKRPATPEERSHRACAVLLAALAIPDAGNAGGGPREVAGFGLGDADRSPEDDVDAEKNARMATLLGFATHPTRSALLAELTVNGALVDADLLPAHVTELYDALESRFEPLRLAAIVKPLLDRLATETPRLAHFAEPLARLAVCRLVAQLGEVYSCVTLDHFKSLLGDLPLDYDDVEKLLVGATPTVKGAAPVARLDYRRKCLRFSSAPRGGDRPSAVAGGGRDTLSVFGFKVDEALDHIRKVTAPPPEVLAKRAAERER--LFAAARDSADADHEKCLARKAVIERRKEEQE 601
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: B8C1C2_THAPS (Eukaryotic translation initiation factor 3, subunit 10 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C2_THAPS) HSP 1 Score: 532 bits (1370), Expect = 2.130e-166 Identity = 340/741 (45.88%), Postives = 478/741 (64.51%), Query Frame = 2
Query: 116 KPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADQLSLVEAAKVGDLEAEA---TPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ---QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSE--SANQLFDEDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETL-----------SKAGGD--------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSE-QQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIER--------ELELQQTKEMLARLGKKADN--VDKLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 2221
KPE AL+RA ELI+IN AAL LLH V ++RR+KTW T YE I++ Y+DLC+QL + R+AKDGLHQYRN++Q QAPGSLE++I +L+D K A A ++ + + D + +A P+SIMLSTM+ + EK + D +++P LKFLWE YRAVLDILK+N+KLE +YH++ A FC Y+R E RRLCD +R H+ NLQK+ +RGWEGWT++ IELHLQTRF QL+VA+ L L+TEGFRTVEDIYNI+Q + PKA++MA+YYEKLT +FWVSENYLFHA+AWYK+YSL EYN+ ++ E + QA+ V+LAA+ IP+ S+ N EDD++K+K RMATLLGF T +PSREA++ E+ K I+ V + LY I+E + P+ +V+ + P LE L + AG D L YV L +++LRL++ L++ YHT++L+ ++ TG+ +SF+++EK IV + + R + V +DH+A C+RFG +ES+ MR QLSTLA +L A N++ P + +RA+ Y V S + EH L RK +IEKRKEEAE XXXXXXXXXXXXXXXXXXXXX XK+Q+I+ E++ + K L +G+ +N VD+L + L ++ + K+K A++LDY+ RA+RIEE+P +K +YE ++ DK+ ++
Sbjct: 1 KPETALRRAEELISINQPNAALALLHEVLSSRRHKTWSTTYEKIIILYLDLCLQLNRSREAKDGLHQYRNLSQSQAPGSLELVIRHLIDS--KAADKGEDIAPFIAGDKPTETIDGDDDAFFDAPQSIMLSTMSTDPEKVQRDTAVLLPALKFLWEVYRAVLDILKSNSKLEKLYHSSAQSALKFCGEYKRRVEFRRLCDMMRMHLGNLQKYGG------VRGWEGWTAESIELHLQTRFVQLDVASSLRLYTEGFRTVEDIYNILQISRALNIPPPKAKIMAAYYEKLTSLFWVSENYLFHAFAWYKYYSLCKEYNRGMSAEMRTMQASAVVLAALCIPKTTSDIKGRNMSTVEDDIAKEKMARMATLLGFHTREPSREAILSEIRAKNIMDDVPEYLRELYVILEDSTDPLDMVEKARPLLEKLRAETGVTSDAPASAGEDEDDADDNTLGRYVQPLTNVLLLRLISNLAAAYHTISLDHVKNLTTGLGVSFEQIEKSIVLSTQSRVLSVRIDHRAGCIRFGNAALESNEMRGQLSTLAKRLTTACNIISPPDVAPVVSERAALYAHVRSTLESEHIATLERKIVIEKRKEEAERIVQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQKIQDGECDLDGGEMDAMEKKRYLTAMGRNVENMTVDQLKEVDTAALAKEHAEKANKKKXXXXXXXXXXARQLDYLVRAVRIEELPQIKSEYEKKIKEDKENYE 733
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S3PZF8_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZF8_9STRA) HSP 1 Score: 536 bits (1380), Expect = 3.730e-166 Identity = 309/758 (40.77%), Postives = 471/758 (62.14%), Query Frame = 2
Query: 104 TWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKA----DQLSLVEAAKV-GDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSA----------AQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQQI--------GQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQI--RSESANQLFD---------EDDLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETL-----SKAGGDLASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQ---VKVTVDHKARCLRFGG------EVMESDSMRTQLSTLATQLQKAVNLVKPVEKTS-EQQRASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAREAKLREKXKMQRIERELELQQTKEMLARLGKKADNVD--KLDKSGREELIRKTKDSVVKEKEDEDARLKSQAKRLDYITRALRIEEMPVLKKKYEAQVAADKKEHD 2221
+W +PENA +RA ELI I +AL +LH V + RR +TW +E IM+ Y+DLC+ L + R+AKDGLHQYRN++Q QAPGSLE ++ YL++Q+E + +++ D++ V AA + D + T ++LST+T + + + + +++P +KFLWE YRAVLDILK+N+KLE +YH T +A NFC Y+R E +RLCD LR H+ NLQK+ + + NR+RGWEGWTS+ IELHLQTRF QLE A+ L L+TEGFRTVEDI+NI+Q G PKA++MA+YYEKLT +FWVSENYLFHA+AWYKFY+L EYN+ +T E K QA+ VLL+A+ IP + ++ SA Q D +DD++K+K RMATLLGF T +P+REAL+ E+ ++A V + LY ++E N P+ +V+ + P L+ L + A G L +YV + +++L+L+ LS+ YHT++L+ +++ G+ ++F +VEK I+ + ++V +DH+A CLRFG ESD+MR+QL+ L+ QL + N++ P + S + R + Y V + EH+D L RK++IE RKEE E RL RE LREK K +I++E+E+ + K++L +G+ + + +L ++L+++ K+K++ + ++K ++LDYI RA RIEE+P++K + E ++ +DK+ ++
Sbjct: 2 SWNQQPENAFRRAQELINIAQPESALNILHEVISNRRNRTWSLTHEQIMITYIDLCLTLNKTREAKDGLHQYRNLSQSQAPGSLEKVVKYLIEQSELKCLEAKELTSGGDDKVVPVAAADLDNDAASPDTNNMMLLSTLTADPAQNQLESTLLIPRIKFLWEAYRAVLDILKSNSKLERLYHLTAGRALNFCSEYKRNVEFKRLCDLLRMHLQNLQKYGSFAAMAKIEEGGKPNNRVRGWEGWTSESIELHLQTRFTQLETASTLHLYTEGFRTVEDIFNILQISNSRRKVAGGSAAPKAKIMAAYYEKLTTLFWVSENYLFHAFAWYKFYTLCREYNRGMTVEQKTQQASAVLLSALCIPSLPDKAASAQQSDDGAAKIKATIKDDIAKEKTARMATLLGFHTRNPTREALLSEIRANNVMADVPDYLRDLYKVLEENVNPLVLVQRARPLLDRLRSEVDTSATGSLNTYVEPIISVLLLKLMHSLSASYHTISLDHIKSLTDGLGVTFTQVEKAIISTATHKNTTPLRVRIDHRANCLRFGDISGSSDAQFESDAMRSQLTILSKQLHRVCNVINPPDLASIDSDRQALYANVRDIVDQEHSDLLQRKDLIETRKEETERLAQEELKEKETKRIEAITNAKAEEQRRLVREQHLREKEKQDKIKKEMEMTEKKKILKAMGQNVETMTATELTTIDADKLVKEHAAKAAKKKDNAERKVKEVQRKLDYIVRATRIEEVPLIKSRREEKLKSDKESYE 759
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Match: A0A7S4R7B1_9STRA (Eukaryotic translation initiation factor 3 subunit A n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7B1_9STRA) HSP 1 Score: 532 bits (1370), Expect = 7.440e-165 Identity = 292/626 (46.65%), Postives = 406/626 (64.86%), Query Frame = 2
Query: 104 TWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKAD-----QLSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERTDREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCRTYERTTELRRLCDTLRQHISNLQKHSAA---------QTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ---------QIGQKTPKARLMASYYEKLTRIFWVSENYLFHAYAWYKFYSLGSEYNKTLTPEAKVTQANCVLLAAISIPQIRSESANQLFDED---------------DLSKQKNQRMATLLGFST-DPSREALMEELVKKGILAQVSSDVLALYNIIETNFRPMSIVKDSMPHLETLSKAGGD---------------LASYVPSLERIVVLRLLAQLSSVYHTVTLERLQTYLTGVRLSFQEVEKLIVKAVKQRQVKVTVDHKARCLRFGGEVMESDSMRTQLSTLATQLQKAVNLVKPVEKTSEQQ-RASFYGQVVSGMAVEHTDALNRKNIIEKRKEEAE 1816
T+F+KPENAL+RA EL +I+ AAL LLH V ++RR+KTW YE IM+ Y++LC+ L + R+AKDGLHQYRN++Q QAPGSLE +I YL+D AEK+ ++ +AD + VE ++ DL+ +TP+SI+LSTM+ + EK + D +++P LKFLWETYRAVLDIL++N+KLE +YH + A FCR Y R TE RRLCD LR H+ NLQK+ + + N++RGWEGWT++ IELHLQTRFAQLE A+ L L+TEGFRTVEDIYNI+Q + PKA+LMA+YYEKLT +FWVSENYLFHA+AWYK+Y+L E+N+ ++ E + QA+ VLLAA+ IP + +Q ED D++K+K RMATLLGF T P+REAL+ E+ + I+ V + LY+++E N P+ +V + P LE L G LA YV L +++L+LL LS+ YHTV+L+ +++ +G+ ++FQ+VEKLIV + ++ V +DH+A CLRFG +ESD+MR QL++L+ QL + P ++ + R Y V + + EH L RKN+IEKRKEE E
Sbjct: 6 TFFHKPENALRRAQELESISQPTAALTLLHDVLSSRRHKTWSPTYEQIMITYLNLCLSLNKSREAKDGLHQYRNLSQSQAPGSLENVIRYLIDAAEKKCKTAKAEADARGAASATAVEEDEIDDLDNASTPQSILLSTMSVDPEKTQRDSALLLPSLKFLWETYRAVLDILRSNSKLERLYHGAALGALKFCREYRRRTEFRRLCDMLRMHLGNLQKYGSGVVPGVEEGGKPNNKVRGWEGWTTESIELHLQTRFAQLETASVLHLYTEGFRTVEDIYNILQISHSRRKIPGVAAPPPKAKLMAAYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSVEMRQMQASAVLLAALCIPTVSETQKSQKKKEDAIDAQRHHIQSTVEDDIAKEKMARMATLLGFHTRHPTREALLHEIQSRNIMEDVPDYLRDLYSLLEANSDPLVMVATARPLLEKLRAEVGSTNASMEEDEDSDDSTLARYVRPLTSVLLLKLLTNLSTAYHTVSLDHIKSLTSGLGVTFQQVEKLIVLSTHSKKFSVRIDHRAGCLRFGDADLESDAMRGQLTSLSKQLSSVCRFITPPDEVHQMAIREQLYSDVRASVENEHAAMLERKNLIEKRKEETE 631 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig108.1056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig108.1056.1 >prot_C-linearis_contig108.1056.1 ID=prot_C-linearis_contig108.1056.1|Name=mRNA_C-linearis_contig108.1056.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1080bp MSQTWFNKPENALKRANELIAINNKPAALELLHSVFTTRRYKTWQTAYETback to top mRNA from alignment at C-linearis_contig108:22045..44767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig108.1056.1 ID=mRNA_C-linearis_contig108.1056.1|Name=mRNA_C-linearis_contig108.1056.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=22723bp|location=Sequence derived from alignment at C-linearis_contig108:22045..44767+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig108:22045..44767+ >mRNA_C-linearis_contig108.1056.1 ID=mRNA_C-linearis_contig108.1056.1|Name=mRNA_C-linearis_contig108.1056.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6480bp|location=Sequence derived from alignment at C-linearis_contig108:22045..44767+ (Chordaria linearis ClinC8C monoicous)back to top |