prot_C-linearis_contig107.1011.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI) HSP 1 Score: 260 bits (665), Expect = 1.230e-81 Identity = 177/354 (50.00%), Postives = 223/354 (62.99%), Query Frame = 0
Query: 16 LALSLLRVVGFGTTSSRP--------RACVCA-------------------SNRVRARPRGTPMVSMASELSKTAISRMRVAELKQELATRGLESDGIRPVLQARLGQAAEVQRARNVMDRVHQRPSAYARTASAEADSIAGT--PPRLARGASLSKRTGRGPL-----SQRARSMSTSLPDPLRSSSKHKYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYK------------------VSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEISSTFTHPSF 317
+A+ L+R G G +SRP RAC A ++RV +R GT V M + +S+TAI++MRVAEL++ELA+RGL++ GIRPVLQ RL +A E + A+ V+DR QR R+ + E AGT PP AR + + R P Q+ R +STS P R S +L+QFDGGSRGNPGPSG GAVLYRL SG R EVWS SVW+G+ RTNNEAEY GLIEGL AA++LGIKRL+VEGDSKL+IQQMLGNYK V+SPKM PLF++A +I+K+F+ LE+ HI RA N RAD LAN+AMDTE SS+ TH S+
Sbjct: 1 MAVCLMRAAGLG--ASRPLAFAARHQRACSAAGRSKAWCSRGGXXXXXXXSASRVSSRALGTG-VRMGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRE----RSNTTEPPRAAGTTAPPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTKPGRQRST-THLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSSCTHRSY 346
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.110e-35 Identity = 69/133 (51.88%), Postives = 89/133 (66.92%), Query Frame = 0
Query: 173 YLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMD 305
Y++QFDGGSRGNPG +GAG VLY G EVW G ++G+ TNNEAEY+GL+ GL A+ +G+ + V+GDS+LI++Q+ G YK S K+ P F KS+ K F E+ HI R N RAD LAN AMD
Sbjct: 11 YVLQFDGGSRGNPGTAGAGMVLYDEVGH----EVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMD 139
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ) HSP 1 Score: 132 bits (332), Expect = 2.630e-34 Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 0
Query: 172 KYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEISST 311
+Y ++FDG S+GNPGP+GAGAV+Y+ E+W+ SV+VG TNN AEY+GLI GL A ELGIK L V GDS+LII+QM G YKV S + + KAK++++ ++ EHI R N RAD LAN + +++SS+
Sbjct: 26 EYCLKFDGCSKGNPGPAGAGAVIYKND-----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTLSRFLSEVHYEHIYRKDNTRADELANFGLQSKLSSS 160
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA) HSP 1 Score: 132 bits (331), Expect = 9.850e-34 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 0
Query: 173 YLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDT 306
Y +QFDGGSRGNPG SGAG V+Y + EVW+GS + + TNNEAEY+ L++GL A+ LGI+ LAV+GDS LI+ Q+ G YKV S + P + A + +F E+ HI R NGRAD LAN+AMD+
Sbjct: 37 YNLQFDGGSRGNPGLSGAGMVIY----NDKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAFSTFEISHIPREENGRADELANIAMDS 166
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A4D9D4W7_9STRA (RNase H type-1 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4W7_9STRA) HSP 1 Score: 137 bits (344), Expect = 5.680e-33 Identity = 69/143 (48.25%), Postives = 102/143 (71.33%), Query Frame = 0
Query: 172 KYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGR--TNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEISSTF 312
+YL++FDGGSRGNPGP GAG V+Y + V+V S+W+G TNNEAEY GL+ GL AAK+LGI+R+ VEGDS+L+++Q+LG YKV + ++ L+ +A ++ ++F + + H+ER+ N AD LAN A+D + + TF
Sbjct: 336 QYLLRFDGGSRGNPGPGGAGIVIYE---QASLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKKLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENFAEFSIRHVERSQNSDADALANRALDEQCNGTF 475
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ) HSP 1 Score: 128 bits (321), Expect = 1.080e-32 Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 0
Query: 172 KYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEIS 309
+Y ++FDG S+GNPGP+GAGAV+Y+ E+W+ S +VG TNN AEY GLI GL A ELGIK L V GDS+LII+QM G YKV S + + KAK++++ F+ ++ EHI R N RAD LAN+ + ++
Sbjct: 27 EYCLKFDGCSKGNPGPAGAGAVIYKND-----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDNIKYEHIYRKDNTRADELANLGLQCNMN 159
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.480e-31 Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 0
Query: 161 LPDPLRSSSKHKYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEISSTF 312
L DP R+ Y+M+FDGGSRGNPG +G G VLY + +EVW+G ++ + TNNEAEY GL+ GL A+ +G++ + V+GDS+LI+ Q+ G YKV S + PLF+ + + F E+ HI R NGRAD LAN AMD + S F
Sbjct: 71 LIDPNRT-----YVMRFDGGSRGNPGIAGCGMVLYD---ADTGMEVWTGRQYL-ETATNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQFSFFEIGHIYRDKNGRADELANEAMDHKTSMGF 213
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6C0M5M4_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0M5M4_9ZZZZ) HSP 1 Score: 124 bits (310), Expect = 3.320e-31 Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 0
Query: 173 YLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEISS 310
+ M FDG S+GNPG +GAGA ++ G+ EV++ SV+ G TNNEAEY+GLI GL AA + GI L V GDS+L+I QM G YKV+SPK+APL++ A ++A F + EH+ R N RAD L+N + SS
Sbjct: 2 HTMYFDGCSKGNPGRAGAGAAIFNEEGT----EVFAESVFAGYSTTNNEAEYTGLILGLNAALKQGIAELQVRGDSQLVIYQMQGKYKVNSPKLAPLYQCATTLAAKFASIGFEHVYRDKNKRADALSNAGIPPSFSS 135
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6C0JZJ6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JZJ6_9ZZZZ) HSP 1 Score: 125 bits (313), Expect = 4.550e-31 Identity = 65/149 (43.62%), Postives = 96/149 (64.43%), Query Frame = 0
Query: 161 LPDPLRSSSKHKYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDTEIS 309
+P P + Y M FDG S+GNPGP+GAGAV+Y VE+WS +++VG TNN AEY+G++ GL A I+ L V+GDS+++I+QMLG YKV S + ++++AK + K F+K++ H+ R LN RAD L+N + I+
Sbjct: 50 IPCPESDIANPYYCMMFDGCSKGNPGPAGAGAVIYAN-----NVEIWSRAIFVGNRETNNLAEYTGMLLGLNEAVRRNIRVLTVKGDSEVVIKQMLGKYKVKSENLLDIYEQAKDLEKHFDKIDYIHVYRHLNARADALSNEGLAKVIT 193
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Match: A0A6C0HEB0_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HEB0_9ZZZZ) HSP 1 Score: 124 bits (311), Expect = 4.590e-31 Identity = 72/154 (46.75%), Postives = 96/154 (62.34%), Query Frame = 0
Query: 164 PLRSSSKHKYLMQFDGGSRGNPGPSGAGAVLYRLYGSGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLCAAKELGIKRLAVEGDSKLIIQQMLGNYKVSSPKMAPLFKKAKSIAKSFEKLEMEHIERALNGRADTLANVAMDT-----EISSTF 312
P + +Y+++FDG S+GNPGP+GAGAVLY Y E+W +VG+ TNN AEY GL+ GL A I+ L V GDS+L+I+QM G YK+ S + PL+ +AKS+ K F+K+ EHI R N RAD LAN A++ EI S F
Sbjct: 21 PAYGENSFEYVLKFDGCSKGNPGPAGAGAVLY--YND---REIWYNRKFVGRKETNNYAEYCGLLLGLNEALRENIRELKVCGDSQLVIKQMKGEYKLKSENLYPLYTEAKSMEKQFDKIVYEHIYRQYNSRADELANAALEDQDFVDEIKSGF 169 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig107.1011.1 ID=prot_C-linearis_contig107.1011.1|Name=mRNA_C-linearis_contig107.1011.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=325bpback to top |