prot_C-linearis_contig106.997.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.997.1
Unique Nameprot_C-linearis_contig106.997.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length269
Homology
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: D7FSQ2_ECTSI (RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ2_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 4.110e-120
Identity = 226/285 (79.30%), Postives = 233/285 (81.75%), Query Frame = 0
Query:    1 MFVLATIKDTVK-----------------VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWWE 268
            MFVLATIKDTVK                 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLC+CLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEIL GKVS C KQGIKVSLDFFENASIPKDLLQSPSVF RGEW+WSXXXXXXXXXXXXXXXXXXXXXXXXXX        +FSL LHD+VRFRVRTLEFTQVTSTA G LQATTVSTARGA  A                 NG +PP+VRERGTSVDLTDVEEAPSAMTITGSMNEEGLGL+SWWE
Sbjct:    1 MFVLATIKDTVKSPELVPGDCCLLRMTIWVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCICLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILTGKVSSCTKQGIKVSLDFFENASIPKDLLQSPSVFARGEWMWSXXXXXXXXXXXXXXXXXXXXXXXXXXENDD----SFSLTLHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGA--AGXXXXXXXXXXXXXXXXNGGQPPVVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLLSWWE 279          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A835YK61_9STRA (RNA polymerase III subunit Rpc25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK61_9STRA)

HSP 1 Score: 215 bits (547), Expect = 3.710e-66
Identity = 122/269 (45.35%), Postives = 163/269 (60.59%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVLAT++D +KV P  F    LDVLT  ++ K++++VI NVGL +CLHS+ES+GD  VYPSDG+AHY+  FR+L+FRPFVGE+L GK+  C++ GI VS+ FFE+ +IPK LL  PSV+ +    WVW                                   ++ + + D++RFRVRTL+FT+V +TA G  QATTVST    G   GG           A G    PP+ R+R TS+D+T   EAP  M+IT S+NE+GLGL SWW
Sbjct:    1 MFVLATVRDNLKVIPESFDRPTLDVLTEVVDMKYSNKVIINVGLAICLHSFESVGDALVYPSDGSAHYEAEFRLLMFRPFVGEVLTGKIGRCSETGITVSIGFFEDITIPKPLLCHPSVYHKRHKAWVWKYSDADADAADFNPDD-------------------SYIMQVGDEIRFRVRTLDFTEVVNTANG-YQATTVST----GPQGGGGXXXXXXXXXRAKGLQEAPPMGRQRSTSIDITTPAEAPPCMSITASINEDGLGLTSWW 245          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A7S2SVH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVH5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.380e-52
Identity = 111/273 (40.66%), Postives = 152/273 (55.68%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVF-TRGE-WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPP---IVRERGTSVDLTDVEEA--PSAMTITGSMNEEGLGLVSW 266
            MFVL+ ++D V+VAP KF  D ++VL+ +++ K+A++VI N+GLC+C H ++SI +  VYPSDG AH+ V FR++VFRPFVGE+  G +     QGI VSLDFFE+  IPK LL  PS +  R + WVW                                        + + VRF+V  +++T+++ TA G +  TT    RGA SA GG               G+ PP    VR+R TSVDLTD EE   P AM I GS+ + GLGLV+W
Sbjct:    1 MFVLSVLRDVVRVAPDKFDRDLVEVLSEELDKKYANKVIPNIGLCICTHDFKSIEEAKVYPSDGGAHHSVVFRLIVFRPFVGEVAVGTIVRSTSQGIHVSLDFFEDVFIPKHLLPQPSEYDARAKLWVWKYEGSGDGGVFH----------------------------VDEQVRFQVERVDYTELSDTARGVVATTTTVEHRGA-SAGGG--------------QGSIPPAQPFVRQRSTSVDLTDGEEQEEPPAMMIIGSVQDHGLGLVTW 230          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A067CHA1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA1_SAPPC)

HSP 1 Score: 175 bits (444), Expect = 5.800e-51
Identity = 100/267 (37.45%), Postives = 146/267 (54.68%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVL  I D +++AP  F  D   VLT +I+ K+A++VIA+VGLC+ L+ +  IGD Y++PSDG +H +V FRM+VF+PF+GE+L GK+  C ++ I+VS+DF ++  IP   +Q+PS F + E +W                                    + + LH++VRFRV  + FT+VT TA G +QAT    A  A S                          R R +SVDL++ +  PSAM I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQIAPELFGTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSHTEVVFRMVVFQPFIGEVLKGKIISCTEEHIRVSMDFVQDIIIPSYAMQTPSFFDKNERLWEWKFPGKEDEQDP-----------------------YYMYLHEEVRFRVTNINFTRVTKTAKG-IQATVTEAADSASS--------------------------RRRSSSVDLSEHDPKPSAMQIIGTIDEDGLGLSSWW 217          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A8K1CBB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBB5_PYTOL)

HSP 1 Score: 175 bits (443), Expect = 1.040e-50
Identity = 107/271 (39.48%), Postives = 151/271 (55.72%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTE--PPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVL  I D + VAP  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++  CN++ I+VS+DF ++  IP   +Q+PS F   E  WVW                                    F + LH+++RFRV ++ FT+VT TA G +QATT         AS   T         AA N  +    + R R  SVDL+D +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRISDVIPVAPDLFEEDYQKVLVEEIDRKYANKVIADVGLCISIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCNEEHIRVSMDFVQDIIIPSYAMQTPSYFDTTERLWVWKYSEGQEK----------------------------FFMDLHEEIRFRVTSINFTRVTKTAHG-IQATTTE-------ASDKTTD--------AAPNAGDMRQSLARGRSASVDLSDTDPTPSAIHILGTIDEDGLGLSSWW 227          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: K3WAI2_GLOUD (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WAI2_GLOUD)

HSP 1 Score: 173 bits (438), Expect = 4.920e-50
Identity = 100/269 (37.17%), Postives = 145/269 (53.90%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVL  + D + V P  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++  C ++ I+VS+DF ++  IP   LQ+PS F   E  WVW                                    F + +H+++RFRV  + FT+VT TA G +QATT   +  A S                        + R R +SVDL+D +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRLSDVIPVNPELFDADYTKVLVEEIDRKYANKVIADVGLCITIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYSEGQEK----------------------------FYMDMHEEIRFRVTNINFTRVTKTANG-IQATTTEASDKAASEG--------------------QSLARRRSSSVDLSDNDPTPSAIHILGTIDEDGLGLSSWW 220          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A7S3H250_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H250_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.080e-48
Identity = 99/262 (37.79%), Postives = 142/262 (54.20%), Query Frame = 0
Query:    8 KDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTR--GEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            +D +K AP +F  DA +VL  QIE K+A+RV+ +VGLC+  + + SIGDPY+YPS+G+A   VRFRM+VFRPFVGEI+ G++    ++G+K+S +FFE+  IP  LLQ+P V+    G W W                                    F + + ++VRF+VRTL FTQ++S+  G    TT  T   AG                        P +R R +S+ L+  +E P+ M I G+MN+ GLGL+SWW
Sbjct:    1 EDKIKTAPDQFGRDAAEVLKEQIEIKYANRVLLHVGLCITFYDFISIGDPYLYPSEGSAIQIVRFRMVVFRPFVGEIITGRLVSSGREGLKISTEFFEDILIPAALLQAPCVYNPVDGLWTWKYGEPEND----------------------------FLMDIGEEVRFKVRTLTFTQLSSSVKGLTATTTSETGNDAGXXXXXXXX-------------XPGPALRRRSSSMGLSPDDEIPAVMQIIGAMNDFGLGLISWW 221          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A6G0XPV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.160e-46
Identity = 97/267 (36.33%), Postives = 146/267 (54.68%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVL  I D ++VAP  F+ D   VL  +I+ K+A++VIA+VGLC+  + +  IGD Y++PSDG +H +V FRM+VFRPF+GEIL GK+  C ++ I+VS+DF ++  IP   +Q+PS F + E +W                                    + + L++++RFRV  + FT+V  TA G +QA T              T   +  +        E P  R R +SVDL++ +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQVAPEFFAADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYIHPSDGTSHTEVIFRMVVFRPFIGEILKGKIISCTEEHIRVSMDFVQDIIIPSYAMQNPSFFDKTERLWEWKFPGREEGQDP-----------------------YYMYLNEEIRFRVTNINFTRVLKTATG-IQAVTE-------------TADTIPDK-------RENP-TRRRSSSVDLSETDPKPSALQIVGTIDEDGLGLSSWW 222          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A6V1SWR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SWR7_HETAK)

HSP 1 Score: 162 bits (410), Expect = 2.940e-46
Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARG 202
            MFVLA +KD+VK+ PS F  + +  LT +I+ K+A++VI +VGLC+CL  +E IGD Y+YP DG+AHYK  FR+LVFRPFVGEI+ G++S  +K+GIKVSL F ++  +P  LLQ+PS F   E  W+                                     + + D  RFRVRTL+FTQV +TA G LQA TVST+ G
Sbjct:    1 MFVLAVVKDSVKIHPSAFDKNQIQALTEEIDHKYANKVILDVGLCICLFDFEHIGDAYIYPLDGSAHYKATFRLLVFRPFVGEIITGRISSQSKEGIKVSLGFTDDIIVPSYLLQAPSQFDPEERAWTWKYQDEDGEAQDML-----------------------MEVGDACRFRVRTLDFTQVKATAKG-LQAHTVSTSVG 178          
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A024URS8_9STRA (DNA-directed RNA polymerase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024URS8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.060e-46
Identity = 95/267 (35.58%), Postives = 143/267 (53.56%), Query Frame = 0
Query:    1 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 267
            MFVL  + D ++VAP  FS D   VL  +I+ K+A++VIA+VGLC+  + +  IGD YV+PSDG +H  V FRM+VFRPF+GEIL GK+  C ++ I+VS++F ++  IP   +Q+PS F + E +W                                    + + L+++VRFRV  + FT+V  TA G    T  +  +                      + +E P  R R +SVDL+D +  P+A+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRVADVIQVAPELFSADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYVHPSDGTSHTDVIFRMVVFRPFIGEILKGKIINCTEEHIRVSMEFMQDIIIPSYAMQNPSFFDKTERLWEWKFPGREDDQDP-----------------------YYMYLNEEVRFRVTNINFTRVLKTANGMQAVTEAADTKP---------------------DKSENP-TRRRSSSVDLSDTDPKPAALQIIGTIDEDGLGLSSWW 222          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ2_ECTSI4.110e-12079.30RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ec... [more]
A0A835YK61_9STRA3.710e-6645.35RNA polymerase III subunit Rpc25-domain-containing... [more]
A0A7S2SVH5_9STRA5.380e-5240.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067CHA1_SAPPC5.800e-5137.45Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A8K1CBB5_PYTOL1.040e-5039.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WAI2_GLOUD4.920e-5037.17Uncharacterized protein n=21 Tax=Oomycota TaxID=47... [more]
A0A7S3H250_9STRA1.080e-4837.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0XPV7_9STRA2.160e-4636.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6V1SWR7_HETAK2.940e-4645.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024URS8_9STRA3.060e-4635.58DNA-directed RNA polymerase n=4 Tax=Aphanomyces Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013238RNA polymerase III, subunit Rpc25PFAMPF08292RNA_pol_Rbc25coord: 79..267
e-value: 3.4E-25
score: 88.7
NoneNo IPR availableGENE3D2.40.50.140coord: 80..214
e-value: 3.7E-16
score: 61.6
NoneNo IPR availableGENE3D2.40.50.140coord: 229..268
e-value: 3.2E-5
score: 26.1
NoneNo IPR availablePANTHERPTHR12709:SF1DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8coord: 1..268
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..268
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 8..77
e-value: 2.1E-15
score: 56.8
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..79
e-value: 3.4E-28
score: 99.4
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 1..78
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 79..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:370109..379331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.997.1mRNA_C-linearis_contig106.997.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 370035..379746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.997.1 ID=prot_C-linearis_contig106.997.1|Name=mRNA_C-linearis_contig106.997.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp
MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHS
YESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVS
LDFFENASIPKDLLQSPSVFTRGEWVWSYPDPDAEEDEEGKGTGGENGGG
VGSGEGEEEDEATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTA
RGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAM
TITGSMNEEGLGLVSWWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013238RNA_pol_III_Rbc25
IPR005576Rpb7-like_N
IPR036898RNA_pol_Rpb7-like_N_sf
IPR012340NA-bd_OB-fold