mRNA_C-linearis_contig106.997.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig106.997.1
Unique NamemRNA_C-linearis_contig106.997.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: D7FSQ2_ECTSI (RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ2_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.500e-117
Identity = 226/285 (79.30%), Postives = 233/285 (81.75%), Query Frame = 3 
Query:   75 MFVLATIKDTVK-----------------VAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWWE 878
            MFVLATIKDTVK                 VAPSKFSGDALDVLTAQIEAKFADRVIANVGLC+CLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEIL GKVS C KQGIKVSLDFFENASIPKDLLQSPSVF RGEW+WSXXXXXXXXXXXXXXXXXXXXXXXXXX        +FSL LHD+VRFRVRTLEFTQVTSTA G LQATTVSTARGA  A                 NG +PP+VRERGTSVDLTDVEEAPSAMTITGSMNEEGLGL+SWWE
Sbjct:    1 MFVLATIKDTVKSPELVPGDCCLLRMTIWVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCICLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILTGKVSSCTKQGIKVSLDFFENASIPKDLLQSPSVFARGEWMWSXXXXXXXXXXXXXXXXXXXXXXXXXXENDD----SFSLTLHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGA--AGXXXXXXXXXXXXXXXXNGGQPPVVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLLSWWE 279
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BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A835YK61_9STRA (RNA polymerase III subunit Rpc25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK61_9STRA)

HSP 1 Score: 215 bits (547), Expect = 5.650e-64
Identity = 122/269 (45.35%), Postives = 163/269 (60.59%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVLAT++D +KV P  F    LDVLT  ++ K++++VI NVGL +CLHS+ES+GD  VYPSDG+AHY+  FR+L+FRPFVGE+L GK+  C++ GI VS+ FFE+ +IPK LL  PSV+ +    WVW                                   ++ + + D++RFRVRTL+FT+V +TA G  QATTVST    G   GG           A G    PP+ R+R TS+D+T   EAP  M+IT S+NE+GLGL SWW
Sbjct:    1 MFVLATVRDNLKVIPESFDRPTLDVLTEVVDMKYSNKVIINVGLAICLHSFESVGDALVYPSDGSAHYEAEFRLLMFRPFVGEVLTGKIGRCSETGITVSIGFFEDITIPKPLLCHPSVYHKRHKAWVWKYSDADADAADFNPDD-------------------SYIMQVGDEIRFRVRTLDFTEVVNTANG-YQATTVST----GPQGGGGXXXXXXXXXRAKGLQEAPPMGRQRSTSIDITTPAEAPPCMSITASINEDGLGLTSWW 245
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A7S2SVH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVH5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.180e-50
Identity = 111/273 (40.66%), Postives = 152/273 (55.68%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVF-TRGE-WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPP---IVRERGTSVDLTDVEEA--PSAMTITGSMNEEGLGLVSW 872
            MFVL+ ++D V+VAP KF  D ++VL+ +++ K+A++VI N+GLC+C H ++SI +  VYPSDG AH+ V FR++VFRPFVGE+  G +     QGI VSLDFFE+  IPK LL  PS +  R + WVW                                        + + VRF+V  +++T+++ TA G +  TT    RGA SA GG               G+ PP    VR+R TSVDLTD EE   P AM I GS+ + GLGLV+W
Sbjct:    1 MFVLSVLRDVVRVAPDKFDRDLVEVLSEELDKKYANKVIPNIGLCICTHDFKSIEEAKVYPSDGGAHHSVVFRLIVFRPFVGEVAVGTIVRSTSQGIHVSLDFFEDVFIPKHLLPQPSEYDARAKLWVWKYEGSGDGGVFH----------------------------VDEQVRFQVERVDYTELSDTARGVVATTTTVEHRGA-SAGGG--------------QGSIPPAQPFVRQRSTSVDLTDGEEQEEPPAMMIIGSVQDHGLGLVTW 230
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A067CHA1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA1_SAPPC)

HSP 1 Score: 175 bits (444), Expect = 5.330e-49
Identity = 100/267 (37.45%), Postives = 146/267 (54.68%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVL  I D +++AP  F  D   VLT +I+ K+A++VIA+VGLC+ L+ +  IGD Y++PSDG +H +V FRM+VF+PF+GE+L GK+  C ++ I+VS+DF ++  IP   +Q+PS F + E +W                                    + + LH++VRFRV  + FT+VT TA G +QAT    A  A S                          R R +SVDL++ +  PSAM I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQIAPELFGTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSHTEVVFRMVVFQPFIGEVLKGKIISCTEEHIRVSMDFVQDIIIPSYAMQTPSFFDKNERLWEWKFPGKEDEQDP-----------------------YYMYLHEEVRFRVTNINFTRVTKTAKG-IQATVTEAADSASS--------------------------RRRSSSVDLSEHDPKPSAMQIIGTIDEDGLGLSSWW 217
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BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A8K1CBB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBB5_PYTOL)

HSP 1 Score: 175 bits (443), Expect = 9.530e-49
Identity = 107/271 (39.48%), Postives = 151/271 (55.72%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTE--PPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVL  I D + VAP  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++  CN++ I+VS+DF ++  IP   +Q+PS F   E  WVW                                    F + LH+++RFRV ++ FT+VT TA G +QATT         AS   T         AA N  +    + R R  SVDL+D +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRISDVIPVAPDLFEEDYQKVLVEEIDRKYANKVIADVGLCISIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCNEEHIRVSMDFVQDIIIPSYAMQTPSYFDTTERLWVWKYSEGQEK----------------------------FFMDLHEEIRFRVTSINFTRVTKTAHG-IQATTTE-------ASDKTTD--------AAPNAGDMRQSLARGRSASVDLSDTDPTPSAIHILGTIDEDGLGLSSWW 227
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: K3WAI2_GLOUD (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WAI2_GLOUD)

HSP 1 Score: 173 bits (438), Expect = 4.360e-48
Identity = 100/269 (37.17%), Postives = 145/269 (53.90%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGE--WVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVL  + D + V P  F  D   VL  +I+ K+A++VIA+VGLC+ ++ +  IGD +V+PSDG +H +V FRM+VFRPFVGE+L G++  C ++ I+VS+DF ++  IP   LQ+PS F   E  WVW                                    F + +H+++RFRV  + FT+VT TA G +QATT   +  A S                        + R R +SVDL+D +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRLSDVIPVNPELFDADYTKVLVEEIDRKYANKVIADVGLCITIYDFVHIGDAFVHPSDGTSHSQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKYSEGQEK----------------------------FYMDMHEEIRFRVTNINFTRVTKTANG-IQATTTEASDKAASEG--------------------QSLARRRSSSVDLSDNDPTPSAIHILGTIDEDGLGLSSWW 220
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A7S3H250_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H250_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.010e-47
Identity = 99/262 (37.79%), Postives = 142/262 (54.20%), Query Frame = 3 
Query:   96 KDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTR--GEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            +D +K AP +F  DA +VL  QIE K+A+RV+ +VGLC+  + + SIGDPY+YPS+G+A   VRFRM+VFRPFVGEI+ G++    ++G+K+S +FFE+  IP  LLQ+P V+    G W W                                    F + + ++VRF+VRTL FTQ++S+  G    TT  T   AG                        P +R R +S+ L+  +E P+ M I G+MN+ GLGL+SWW
Sbjct:    1 EDKIKTAPDQFGRDAAEVLKEQIEIKYANRVLLHVGLCITFYDFISIGDPYLYPSEGSAIQIVRFRMVVFRPFVGEIITGRLVSSGREGLKISTEFFEDILIPAALLQAPCVYNPVDGLWTWKYGEPEND----------------------------FLMDIGEEVRFKVRTLTFTQLSSSVKGLTATTTSETGNDAGXXXXXXXX-------------XPGPALRRRSSSMGLSPDDEIPAVMQIIGAMNDFGLGLISWW 221
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A6G0XPV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.640e-44
Identity = 97/267 (36.33%), Postives = 146/267 (54.68%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVL  I D ++VAP  F+ D   VL  +I+ K+A++VIA+VGLC+  + +  IGD Y++PSDG +H +V FRM+VFRPF+GEIL GK+  C ++ I+VS+DF ++  IP   +Q+PS F + E +W                                    + + L++++RFRV  + FT+V  TA G +QA T              T   +  +        E P  R R +SVDL++ +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQVAPEFFAADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYIHPSDGTSHTEVIFRMVVFRPFIGEILKGKIISCTEEHIRVSMDFVQDIIIPSYAMQNPSFFDKTERLWEWKFPGREEGQDP-----------------------YYMYLNEEIRFRVTNINFTRVLKTATG-IQAVTE-------------TADTIPDK-------RENP-TRRRSSSVDLSETDPKPSALQIVGTIDEDGLGLSSWW 222
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A6V1SWR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SWR7_HETAK)

HSP 1 Score: 162 bits (410), Expect = 2.170e-44
Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARG 680
            MFVLA +KD+VK+ PS F  + +  LT +I+ K+A++VI +VGLC+CL  +E IGD Y+YP DG+AHYK  FR+LVFRPFVGEI+ G++S  +K+GIKVSL F ++  +P  LLQ+PS F   E  W+                                     + + D  RFRVRTL+FTQV +TA G LQA TVST+ G
Sbjct:    1 MFVLAVVKDSVKIHPSAFDKNQIQALTEEIDHKYANKVILDVGLCICLFDFEHIGDAYIYPLDGSAHYKATFRLLVFRPFVGEIITGRISSQSKEGIKVSLGFTDDIIVPSYLLQAPSQFDPEERAWTWKYQDEDGEAQDML-----------------------MEVGDACRFRVRTLDFTQVKATAKG-LQAHTVSTSVG 178
[Close]
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Match: A0A024URS8_9STRA (DNA-directed RNA polymerase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024URS8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.300e-44
Identity = 95/267 (35.58%), Postives = 143/267 (53.56%), Query Frame = 3 
Query:   75 MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHSYESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVSLDFFENASIPKDLLQSPSVFTRGEWVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTARGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLVSWW 875
            MFVL  + D ++VAP  FS D   VL  +I+ K+A++VIA+VGLC+  + +  IGD YV+PSDG +H  V FRM+VFRPF+GEIL GK+  C ++ I+VS++F ++  IP   +Q+PS F + E +W                                    + + L+++VRFRV  + FT+V  TA G    T  +  +                      + +E P  R R +SVDL+D +  P+A+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRVADVIQVAPELFSADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYVHPSDGTSHTDVIFRMVVFRPFIGEILKGKIINCTEEHIRVSMEFMQDIIIPSYAMQNPSFFDKTERLWEWKFPGREDDQDP-----------------------YYMYLNEEVRFRVTNINFTRVLKTANGMQAVTEAADTKP---------------------DKSENP-TRRRSSSVDLSDTDPKPAALQIIGTIDEDGLGLSSWW 222
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ2_ECTSI1.500e-11779.30RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ec... [more]
A0A835YK61_9STRA5.650e-6445.35RNA polymerase III subunit Rpc25-domain-containing... [more]
A0A7S2SVH5_9STRA5.180e-5040.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067CHA1_SAPPC5.330e-4937.45Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A8K1CBB5_PYTOL9.530e-4939.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WAI2_GLOUD4.360e-4837.17Uncharacterized protein n=21 Tax=Oomycota TaxID=47... [more]
A0A7S3H250_9STRA9.010e-4737.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0XPV7_9STRA1.640e-4436.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6V1SWR7_HETAK2.170e-4445.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024URS8_9STRA2.300e-4435.58DNA-directed RNA polymerase n=4 Tax=Aphanomyces Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:370035..379746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.4
Seed ortholog evalue4.8e-95
Seed eggNOG ortholog2880.D7FSQ2
Preferred namePOLR3H
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273,RC02795
KEGG koko:K00121,ko:K03022
KEGG ReactionR00435,R00441,R00442,R00443,R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00230,ko00240,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko03020,ko04623,ko05169,ko05204,map00010,map00071,map00230,map00240,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map03020,map04623,map05169,map05204
KEGG ModuleM00181
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000428,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005694,GO:0006139,GO:0006351,GO:0006352,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0046483,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription initiation from RNA polymerase III promoter
EggNOG OGsCOG1095@1,KOG3297@2759
Ec32 ortholog descriptionRNA polymerase Rpb7, N-terminal
Ec32 orthologEc-03_002970.1
EC1.1.1.1,1.1.1.284
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021
Exons7
Model size1296
Cds size807
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927402.079652-UTR-C-linearis_contig106:370034..3701081622927402.079652-UTR-C-linearis_contig106:370034..370108Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 370035..370108 +
1690879680.0747068-UTR-C-linearis_contig106:370034..3701081690879680.0747068-UTR-C-linearis_contig106:370034..370108Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 370035..370108 +
1622927402.1647778-UTR-C-linearis_contig106:379331..3797461622927402.1647778-UTR-C-linearis_contig106:379331..379746Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 379332..379746 +
1690879680.1593177-UTR-C-linearis_contig106:379331..3797461690879680.1593177-UTR-C-linearis_contig106:379331..379746Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 379332..379746 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927402.094694-CDS-C-linearis_contig106:370108..3701441622927402.094694-CDS-C-linearis_contig106:370108..370144Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 370109..370144 +
1690879680.0866024-CDS-C-linearis_contig106:370108..3701441690879680.0866024-CDS-C-linearis_contig106:370108..370144Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 370109..370144 +
1622927402.1050088-CDS-C-linearis_contig106:375840..3760111622927402.1050088-CDS-C-linearis_contig106:375840..376011Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 375841..376011 +
1690879680.0970693-CDS-C-linearis_contig106:375840..3760111690879680.0970693-CDS-C-linearis_contig106:375840..376011Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 375841..376011 +
1622927402.1158407-CDS-C-linearis_contig106:376418..3765051622927402.1158407-CDS-C-linearis_contig106:376418..376505Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 376419..376505 +
1690879680.1069722-CDS-C-linearis_contig106:376418..3765051690879680.1069722-CDS-C-linearis_contig106:376418..376505Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 376419..376505 +
1622927402.1251898-CDS-C-linearis_contig106:377110..3771751622927402.1251898-CDS-C-linearis_contig106:377110..377175Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 377111..377175 +
1690879680.1181557-CDS-C-linearis_contig106:377110..3771751690879680.1181557-CDS-C-linearis_contig106:377110..377175Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 377111..377175 +
1622927402.136871-CDS-C-linearis_contig106:377624..3778141622927402.136871-CDS-C-linearis_contig106:377624..377814Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 377625..377814 +
1690879680.1301396-CDS-C-linearis_contig106:377624..3778141690879680.1301396-CDS-C-linearis_contig106:377624..377814Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 377625..377814 +
1622927402.1467843-CDS-C-linearis_contig106:378800..3789461622927402.1467843-CDS-C-linearis_contig106:378800..378946Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 378801..378946 +
1690879680.1409566-CDS-C-linearis_contig106:378800..3789461690879680.1409566-CDS-C-linearis_contig106:378800..378946Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 378801..378946 +
1622927402.1558597-CDS-C-linearis_contig106:379219..3793311622927402.1558597-CDS-C-linearis_contig106:379219..379331Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 379220..379331 +
1690879680.150421-CDS-C-linearis_contig106:379219..3793311690879680.150421-CDS-C-linearis_contig106:379219..379331Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 379220..379331 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.997.1prot_C-linearis_contig106.997.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig106 370109..379331 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig106.997.1

>prot_C-linearis_contig106.997.1 ID=prot_C-linearis_contig106.997.1|Name=mRNA_C-linearis_contig106.997.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp
MFVLATIKDTVKVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCVCLHS
YESIGDPYVYPSDGAAHYKVRFRMLVFRPFVGEILAGKVSCCNKQGIKVS
LDFFENASIPKDLLQSPSVFTRGEWVWSYPDPDAEEDEEGKGTGGENGGG
VGSGEGEEEDEATFSLALHDDVRFRVRTLEFTQVTSTAAGRLQATTVSTA
RGAGSASGGVTVGVVGGRGGAAGNGTEPPIVRERGTSVDLTDVEEAPSAM
TITGSMNEEGLGLVSWWE*
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mRNA from alignment at C-linearis_contig106:370035..379746+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig106.997.1 ID=mRNA_C-linearis_contig106.997.1|Name=mRNA_C-linearis_contig106.997.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9712bp|location=Sequence derived from alignment at C-linearis_contig106:370035..379746+ (Chordaria linearis ClinC8C monoicous)
CTGTATCGTTGGTGCTCCCCTGGCTGTAGTACTTTCACTGAGTGTGCTGC
GCCCATCAGCTATTGAGGGGCAGCATGTTCGTTCTCGCAACGATAAAGGA
CACCGTGAAGGTGAGAGGGTGGGGGGTATGTGTGTATCGTGTCTCGCGCA
CGGGTCTCACTGCAACATACGGAGTACATCGTTTGAATGCACCAACCCCA
TTGACAGCAGGCTACTCTTGTAAGGAAACCTCTAGAGTTTGGTGATTAGC
TGCAGAAGGGTGGATGCACGCTTAGAAATGATGCCAAACCTGGATAGCAG
TGTACAGGAGCACAACAGAAAAGCGGCGAAATCATCATCATCATTGGAGG
CCCAAACTGAAGTGTCGACCGCACGTAGCGTCGAGGCCACACCGCCGCCG
CGCCCAACGTGCAAGTGGTGCAAGCAGCCTGCGATGCGTGCCGATATTCA
CAGCAGAGCATGCTTTCGTGCCCAGTTCCAAGCACAACCCTGACCGCACC
GGCGCACCGGCATGTGCAACTGCTGGGCCACTTCCACCCCCGCGAAAATG
TTAGGACTAATCTCGCCGCACACAAATGGAGCGCGTTATGATCTACAGTA
CCAGGTATGCTTTATCTACCGTTACTTGAGTTTCCCCCCCGGGGAGGGGA
TCCTTTTTGTTCTGAAACCAACCCCCCCGGGGTGAAATTGAAGTACCCGG
GTGGCGTAAGTAGTTTTCTGTTTTTGCGACCCTACACCCCGGGGTAGAGG
GGAAGTCTACCCTCGGGAGCCAAAAAACTACGGCATCACTTGTGCTTGAG
AAACAAAAAATCAAAAAATACCTCTCTCTGGTGGTATGCACCAAAGAAAA
AAACTTTGTCATGTCCTCGCCACGCTTGCCTCCCGAACTATAGCTCATAA
TCCCCTGCATCCTCCTCCTCCCCCAACTCAATGGCATCTTCAGTGCCGTC
TTCCTTGTCCGAGTCGTTGTTCGGGTCCTCAACACCCCAGGAGCGCAGAG
CTGGTGGTGTAAGTTACTATATTCGTGGTTAGGTTCTACCTTGTGCTTTT
TTTGCTTTGAAGTACGGTATATTCGTGGCTAGGTTCTACATTGGTTTTTG
TTTTTGCTTTGAAGTCCTGATGTTCCGTGTCCTTCTATCGAAAAATGAGG
TAACCTTTTCGGCAAGGTATTGTCGGCATTCTGTGGTACTCCGTATGTTC
TAGACGGACTTCAGAGAAATGATCATACATACAAGAAGAAACGAAAGCAC
TTCACCCTTTTGTTAGGGCTGTGTATCGCTAGCATTTTTCGATATAATAT
ATATCGTCAATCGGCGCAGCCGATATTACGATATGTTCACGAAGCCAATA
TATCGTGAAAATATCGCCCCGCTGGCTGCGAGCGCAGCGAGCCCGGCGAG
CGAAGCGAGCCCCCCCTCGGCCCCCCCCGGCTGAGGGGGCCTCGCCGGAG
GCTTATTTTTACGCGATTTGGCTTCACAAGAAGATCTTTTTGGTGTGATT
TTGGGCCACTTCGATGATGCCTCTTTTGTGTGTGACATACGGCAAAATTG
AAAATTTTACCAAAAATGAGAGAAAATGAACGATGGATAACATTTTTTTT
TCGAAGCTCTGGTTGGGTGGCACAACACCACCACGTTTCAACAAAGAGTC
AGTAGGAAGCTGCTTCCAAAACACGcCCCCCACCCCCCCTCCCTTCTCAA
TCTCTTCATGAAACACCAATACCGAAAAACAACAGCCCAAAACCAAAACC
CAAAACCCAGCGCTCAGCCCACCACGTGGTGGGGAACCGTTGCACATGAC
CTGCTCCACACAAAATGCGAAACCGAACAATCAAGGAGAAACGAACACCA
GACGCGCTGGTCAGACCAACGAAACAGCTAAACAGCAGTCTTCTTTTGGC
GAACAGCACTCTTCTTCCATTCATCCACCACGCCCCACACGTTGCGCAAG
TACACGAGGAGCTCGACGTTTTCGTCTAAAAGGCAACTCCGGTTAGGCGT
CACGGTTAGCCCTGCCGTGGAAAACATGCGCTCGGATTGCGCTTGAGATG
ACGGAATGGCAAGCACACGACGAGCCAGCGCCGCCATAAGAAGGTATTCC
AACTGCCTCTTGCGCCACCAGTCGAGGGGATTGTTGAAGGTCTTCTTCTC
TACCGTCTCCCCTGCCTTCTTGGTTTTCTTCATGTCCCTAACCCGTATCC
CAGCTGCGGCCTTGAAGGCCGAGACCTCCATGTCCGCCATGGCCTCCAGT
TGCTCGCGTCTCTCATCCGCAGAATCGCCAACACTGCAATCCCCTGCATC
CTCAGCGTGGGCAGCAGCGGCGGCCTCGAACGGGCTCATGCGAGGGCGCT
TCGGGACTCCCTCCTGGCCTTCTGGTGAACCCGGCTGCGTCTGAATGGAC
GTCTGGATGGGCTCGGGAGCAGGTGTCTCCGCGGAGGCGGGTGCCTTGTC
GCTGGCGTGCTTCTGCAAAGCAATGTCCACCGCGGCGCTAGCGACAGCGC
GCCACACGTCTGCGTGCTCCTGAGGCAGGATCCCGTAGAGGTGCTTGGCC
CTCGGGTCGACGGCCGTTGCGTACACCTGCTTCAGCTTAAAACCCTGGGG
TTGGCGCCTCTTGCCCTCCTTGTACTCGAGGATGTTGGAGCCGTCGCCCC
AGCGGTTGGTGAAATCTGCCAACAGCCTTTCGACGTCCGGACGAACGGCC
TCCATCGCCTTCTGGGTAGTCTCTTTGAGCCCCTGTTGCGCAATGTTCCT
CAGATCCTTGGCTGCGGCCTCAAGCCCGTACCGCAACTCCGCAACCTTCG
CGATGGTCATGCCACCCGTCACGTACTGAGCCCCCTCCAGGTCCTTCTGC
GCCTTCATGAACGGCTCCAGGATTGGTTCGATCAGCCGCAGCACCTCCCA
GTGCGTGTCGGACAACAGCGGGTGGATGTCGTCCATCGACTCATGAAGCT
TGATCGCCTTCTTCATGACGTAGAGCAGACGCGCGATCATCGCCCATGTC
GACCACCACCTCGTCTCCACGTCTTGCATCACGGCCAGCGCTTCTATCTG
GAGGATGCCGCACAGCTCGGCGAGGCGAGCTGCCATCTGACTCGACTTCT
TGTAGCGTCCCACAAGCGTTCGTGCAAGGCTCAAAGCGCCAAGACTCCTC
CCGTTGAAGACCGAGGAGGTCGTCGACTCCATGCGGTGGTTGGAGCAGCC
GACGTGTGAAATCATATCCCCGCCCACCTCCAGCAGGCGACCCGCCTTGA
CCATAGACGGCTCGCAATCGGAGACGCATGCAGTCACCCGACCGGTTAGG
TCGTGGCGTTCGATCATCCCCGCTTTCTCGTTCGCCAAGTCCTCCCCCGT
GGTGGTCCCCGTGTGTTTCGCGCAGTCCAGAGAAATATGGTGCAGGTTCC
ACTCGGAGTCGATGTAGGCCACGGTCAACGACGAGTACGACTCGTTGCTT
CGAGATGTCCAGCCGTCGTGGTGATCGCTACGAACTCGTCGTCCAGCATG
AGGGCGACCTCGCTTTCGAGCCCCTTTTTTTCAGCGCGCATCCTTGAAAG
AAGCTCGCGGCGGTCGGGAACCGTGGCTTTTTTGTTGAGACTCGAGACGA
CAACCTTGAATTCAGGGTAGGTACTCGACGAACTGTTGCATGGTCAAAGA
AGTCCGAACGGCCGAACGGGGAGAGTGGGGCAACAGTCAGCTGTGCTGCA
TATTGTTTCGAAAGGGTTAGCCTGCGAGAGTTTGAAGCGACGGCAGTCGG
TGTACAGGTGTAATTTCGTGCCACCATGTAAAAATAATACGTCACTGCTT
GTGCACAACGCGCTGCCTCTTGTTCTTTTTAGGCTATGACCTTGGCGCCC
TCTGCTCGCAAGCGCGGGCGCACCACACACGCTGAAATACTTGCACATGG
TGTGTGCAACACGCGCCAGCTTGGAAAAACACTGCTGTATCGCTGAAATA
CTTACACATGGTGTGTGCAACACGCGCCAGCTTGCCAGCTTGGAAACGCA
CTCGCTGAAACACTTTTTGCTTGAGACACCAAAAGTTGGAGACACATCAA
AAAAACTTTAAAAAAAAAAAAAAAAAAAAAAACGTGAAACTTACCGACAG
AGCCAGGTAGTTGTTGACGATGAGACGAACCAAATCGTCGTGCCAGTCTG
GCCCCTGCTTCGAGAGGAAGCTCCCGATCTTTGTTTGTCCTGTTGCTGCT
GCTGCTGCTGCGGGGCCGGAGCGCTTCCCGCGCTTGGTGTTCTCGATCGC
TGTGTGTGCCTCTCTGTGTCCAGGATAGGAGGTGTCGAGATGAGACACGA
GGTTTGGAGGCGATCCTCCCGTGAACTTGCGCTCCGCAGTTCTGAAGTTG
CCGCTCCCAACGCACAGCTGACAGATCGCAAGGCCAGCAAACCTCGGGTT
CTGATACACCTTGTAATGCTTCCACACCATGTGCGAGGCGCCTGCGGGCT
TGGACAGTTTCGGCGCTGTCTTCACCCTGTCCACCTTCTCGGTTTCTTTA
TCACGCACTACTGGTGCTGTCTCTAGGACTGGTTCAACTGCAGCCCCCGA
CGTGGTGGACACTCCATCCTGGTCCGCTGCTAGTTGTGAGGCACTCATGG
GTGCTTACCAAGTGTGCTGTAGTGCTGTTGCTGTGCTGTTGCTGTGTGCG
TGCGCCCGTGTTCATCAGGAGCTCCGTGTGCAATGTGTGATACACGGGGC
CATTTTCGATTCACGGAGCCCCCCAGAATATCGGCCCGCGTATCGGTGCC
ACGATTCTATATCCGATACTATATAAATCGTCCGATTATATCACACATAT
CGTTTCCGATACACAGCCCTACCTTTTGTGCTTTGCTTGAAAAAAATCCA
TCTAGAACAGAGAAACTCGTGGGAAGCTGCTACCCCGGGGGGGAATCGAA
TAACCCGGGGGGGTCCTTTTTATTCCCATGAATATCGAACTACCCCGGGG
GTAAATCAAAGAACGCATGCTTCCAGGCCAAAAAGGTAGTGGGGAGGGAC
TCTTCCCCGGGGGGGAAGCTCAGTAACGCACGGGAGAGTATACACTAGTT
GGAAATCGTAGCAGGTCACGGATGCGTTGCTTGCTGCATATCATGCGAGA
GGCATTTTTTTTTTTTTAATACAACGGCCGGCAGAACCGCTCTGGACTGC
CCTACATGTCGGCCTCATGTTTTGCGTGGGACACCGAAGACCGAAGCTCG
ACGAAGCACAAGCAGCGCGCACCCACACGCCCACACAACCTCTGGTACGG
ATGGCTCAAGCAAACTCAACTCCGTCGCCACCGAGCAGCAGCATACCTAT
GCCACAGCGTGTCCCTGGTGTTTTCTCTCGTTGGCTTGGTTGTGTGTGTG
TGTTTCTGTCCCATTTATTTTGGCGACAGTCCCTTTCCGATCAAGGCCAG
ACGTGTACTACACGTTGCGGTGTATTTAGAGTACTACACTTGTTCAGTGT
ATTTTTCTGTACAACTAGAACCAACCGAGGTCACACAGGAGGGGGTAAAC
ACTGGGGCTTTTTTATTCTTTTCTGTTTCTTCTTTGCCCCACCTTCCTCC
TGCGGTGCTTGCCTTGGATTTTATCGCGAGAAGGGTGCAGCCATCCCTTT
CCCTCGTCAACGTGCTAAGTCGAAGTTTGGTACTCACGAGCTTTTTTCAG
CTATGTTATCGCTTTCACCGGCAAAGTCGCAAAATAATCACCTTTGGTTG
GAATTGAACTCCAGACTTTGCTGCTAGTGGGTTCGAGGTTAAACCACTAG
GCCACCGGGGCGACCGGGGTTAAGGACGCTTTTTTCATGTACATATGTAT
GTGCAGGTGGCCCCGAGCAAGTTCAGCGGCGACGCTCTGGACGTGCTAAC
GGCGCAAATAGAGGCCAAGTTCGCCGACAGGGTCATCGCCAACGTCGGCC
TCTGCGTCTGCCTGCACAGTTACGAGAGCATCGGGGACCCGTACGTCTAC
CCCTCTGATGGCGCAGCGCACTACAAGGTACATTGGGAGGGAGGGCGGGC
GCTTCTTGCCCGTGCTAGATATGTGTAGGCCTGCAGCATGCGTTCTGCTT
GAGTATGGATACCCGGTGTACCCGAAACCCGACCCGATGGTTGGCCCGTT
TGGGCTGTACATGTCTCTTGGGTCAAGGCTGCTGTTCTGGGGCGCAGCAC
GCGACGAACGTATATCCTGATTTTGCAAAGCTTAGTTAACTGCCTAATCT
GGCCGCCGAAGCGTCCATCGCCCCACTTCTCTGCTGTTCTGACGCTTCAA
TCGTTTTACGTTTCATTTCGTGTTTTATCTTACTGCTCCTATTGTTGTTG
TTGTTGTTGTTGTTGTTGCTGTTGCATGTGCACACACACGTCGCCTTCGA
ACGATTCCCTTCCTTCCCTCGCCTCGACTGGAAGGTGCGGTTCCGGATGC
TGGTGTTCAGGCCGTTCGTGGGGGAGATCCTGGCCGGAAAGGTCTCCTGC
TGCAACAAGCAAGGCATCAAGGTGGGGGCCGTGAGCGTTTAGCCGAGACG
GCAGCTGTTGTTGTTCTTGCGCGTTCACCTGACTGCTCGTGGATGTCGCC
GAATTCGGGACAGGTTGGTTGTGTTTCTTGAATCCAAGAGTTGGAGGCGT
CGGAGTTTTTACATCTTCACGTTCTCTCGATACACTCACGACGTGGTGGC
CCTTGTGGGTGTTCCTTGTACTTGTTCTGCAGCTTGCTGTGTTATGTCCG
ATTCCGAGAGAGATGGTGTGAGAAGTTCTTGCCCTCGGGTATTGCTGTCA
AAAGAACGCTCTGTTCAGGCTGCACGGTCGCTGTGGCTGCCACCCCCGCT
CTTTTTGCGGCGACCGAGCGAGGTTACCGCAGCGGCCATAATTGCCAAAC
CTAGGTGACGGCCCCTTGGTAACGTACTGTAGAGGTCGAACCTGGAAAGC
TCTGGCTCTGTTTTGTGCCCCGGCGCGCCACCCTGCAGCAGCCCTGATTC
TACCTGACGCTTGTATTGAACGTGAACCCTGCAGTATTTGCTGCTGCAGC
CCATCGATTGAGGCAACCCCCCCCCTGCCGGCATCGCGCTTCCTCCCCCT
TTTTGACCGCTGCAAACCTTTCCCAGGTGTCGTTAGATTTCTTCGAGAAT
GCGTCCATCCCAAAGGACCTTCTTCAGTCGCCGTCCGTCTTGTAAGTTCT
GGTTTCGTCTGCTCTCGGTTATATCGTGTACCCCCCCCCCCACACCGCAT
CCTGCCTAACACACGTAACCCCTGAAGGGGACACACAGAGCGGACTCGTA
TCCCAAGTACCACCAACAGGTTTCGTCTGCTCTCGGTTCCATCGTGTACG
GACAAGGACTCCTCGCATGGCGGACCTTGGTCTAGTCCGAAGCGATCAAT
GGAATGGATGTAAAAGCGCAATAGCGCAAAAGTGGGGGTACACTAGGAGT
GAGGTAATTTGTTTGCGCCGAATACGGTTTCACGTGCACGGCTGATTATG
TCGATCATCGCCTGCGGCATGCGAAATATATTTTCATACTAGTATACACC
TACCTTGTTGCAAGGAAGTAAACGGTGCTGCCCCCCTTCCTTTCTGCCTT
CCTCCCCGGTCTCTCGCTCGCATTTTGCCGTCGCTTCAAGCACTCGAGGG
GAGTGGGTGTGGTCTTACCCCGATCCGGACGCGGAAGAAGACGAAGAAGG
CAAGGGGACAGGGGGCGAGAACGGGGGGGGGGTAGGGAGCGGGGAAGGGG
AGGAAGAAGACGAGGCAACGTTTTCGCTGGCCCTGCACGATGATGTGCGG
TTTAGAGTGAGAACGCTGGAGTTCACGCAGGTGGGTGGGGGGTGAGGGGC
GATGGGGAAGCAAGCCCACCCCAAGGACAGTATAGTGCACGACCTCGATA
GGGTTCTGAACTCTCTCGTATCTCGTATGTAGGTGGCGTGGTTGGTTTTG
CACCCTCTAAGCTTGACTGCTGTATGGTGAGGTTTTAGTCCCGTTTGACG
CACGACGGCTTGGCTCTGTCTGAAAGGTTTGGCTTCTTCGTTGGAAGACT
GACGGCGCATTTTCTACGTGCTGTGCTGCTTGATTCTGCACGAGCCTGTT
TTCCTCGCCAGAAGGAGCGGGGTGAGTGGTTTGGGTTGATTCGTTTTTCG
GGTGCTGTCGTTTGCCCTGCACTGGCGGTCGTTTGCCCTGCATCGGCGAG
CTTTATCAAACGAGCACTGAAATCCAGGTAGTATTGGGGGCAGGAATACT
GTTTCTCGTTTCTCCCATTCTGCCATTCTCCCATTCTGCGTCTGAGAAAG
GCGCGCTGGCCGTGTGGCGTTCCACACGCTTTTTTAGCGCGAAACTTCAA
GTGCTCGTGCCCCGCCCCGCCCCCAAAGTAGTGTCCGCCTTCTCCGATCT
ATGTCAATCTATCGGTTGCATTGCCGCGCCCTCGTCGATGACCCGAGTGA
CGAGCGTAGCGGCGGGTAGACTTGCAGGCCCAACACCAACACCAACACCA
ACACCAACACCGCCGCCGTGTCTACGGTATACTTCGAGTATACTATTAAT
AGCGAGGCCTACTACGGCAAGGCTCTCGCCGCTCGCCTACAACCTGTACG
ACCCTTTTACCTTTTTTTTCGCGCTCAGCCTTGCTGCTTACGATGTTGCA
TTGTTCGTGCCCGGCAGACCGGCAGCGTCCGCGTCCGCGTCCGCGTCCGC
GTCCGCGTCCGCGTCAGCCAGTCGGTTTTTCTTTTCGCTCACTGGTGCGT
GGGTGCGGCCAAACTAAACGAATCGCTCGGTATGTGTTGTGATGTTGTTT
GTTGATGCTGGCGCAGGTTACGTCGACGGCCGCAGGTAGATTGCAGGCCA
CTACAGTGTCGACGGCGAGAGGGGCAGGGAGCGCGTCCGGGGGGGTTACG
GTTGGAGTTGTTGGGGGCAGGGGGGGCGCCGCGGGGAACGGGACGGAGCC
ACCAATAGTCCGGTAAGGGTTCTGCGATCCGTAAAAAGGGTAAGGTTCTT
CGCTTTTCTGGCCTTCCCAATGTTTTGATGATTTTTCATGTTCTTGGTCT
TCCGTGGTGTTCGCTCACTGCGAGGCCCGGAATGCAATTGGTGCCGTGGA
TACCCTTCCTTCCACCTACTGCTGTACGGTGCCCACCCCTTTTGTCTTTT
TTTTGTCGTTGCTGGCTCTCTTGGTAAGTTCATAAGTCTGACGGCAACTC
CCTCCTCGCGCTTTCCCCCCTGCGCGTGGTCCAAGGGAGCGAGGGACAAG
CGTAGACCTGACGGACGTCGAAGAGGCGCCGTCCGCCATGACCATCACCG
GCAGCATGAACGAGGAAGGCTTGGGGCTGGTCTCGTGGTGGGAGTAAAAA
CAAAAGCTCCACCCGCCACATGATGGCAGAGAAAGGAAATGCATACGTTT
ACGGAGTACTGGTATATGTTTCAGTTTGGGGTTGGGAATGTGATGGTGTG
TCGCGTGCGTTGAACAGTTATAGAAGCTTTGAATTCCTGTCGTTCTCCTG
TCGGCACTACGAGTATGTGTTGCCGTGGGCCACAAGAGGGCAGTGGCTAG
CACGGTGGTTGGGGATCGCCTTGGTCTGCTTTGTGCTGTGTCGGGGATCG
ATGGTTTTTGTGCGCTCCCATGAGTTTCGGGAGTTCGGGCTGACGGTATC
GGAGAAGAAGATGGAGACCCTCCTGATGCGCGTGAAGGAGAAGCAGCCAC
CACCACCACCGCCGCCGCCGCCGCTGATCATCGAAGCAGCGGGGCAGAGG
TACGCGCAGACG
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Coding sequence (CDS) from alignment at C-linearis_contig106:370035..379746+

>mRNA_C-linearis_contig106.997.1 ID=mRNA_C-linearis_contig106.997.1|Name=mRNA_C-linearis_contig106.997.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at C-linearis_contig106:370035..379746+ (Chordaria linearis ClinC8C monoicous)
ATGTTCGTTCTCGCAACGATAAAGGACACCGTGAAGATGTTCGTTCTCGC
AACGATAAAGGACACCGTGAAGGTGGCCCCGAGCAAGTTCAGCGGCGACG
CTCTGGACGTGCTAACGGCGCAAATAGAGGCCAAGTTCGCCGACAGGGTC
ATCGCCAACGTCGGCCTCTGCGTCTGCCTGCACAGTTACGAGAGCATCGG
GGACCCGTACGTCTACCCCTCTGATGGCGCAGCGCACTACAAGGTGGCCC
CGAGCAAGTTCAGCGGCGACGCTCTGGACGTGCTAACGGCGCAAATAGAG
GCCAAGTTCGCCGACAGGGTCATCGCCAACGTCGGCCTCTGCGTCTGCCT
GCACAGTTACGAGAGCATCGGGGACCCGTACGTCTACCCCTCTGATGGCG
CAGCGCACTACAAGGTGCGGTTCCGGATGCTGGTGTTCAGGCCGTTCGTG
GGGGAGATCCTGGCCGGAAAGGTCTCCTGCTGCAACAAGCAAGGCATCAA
GGTGCGGTTCCGGATGCTGGTGTTCAGGCCGTTCGTGGGGGAGATCCTGG
CCGGAAAGGTCTCCTGCTGCAACAAGCAAGGCATCAAGGTGTCGTTAGAT
TTCTTCGAGAATGCGTCCATCCCAAAGGACCTTCTTCAGTCGCCGTCCGT
CTTGTGTCGTTAGATTTCTTCGAGAATGCGTCCATCCCAAAGGACCTTCT
TCAGTCGCCGTCCGTCTTCACTCGAGGGGAGTGGGTGTGGTCTTACCCCG
ATCCGGACGCGGAAGAAGACGAAGAAGGCAAGGGGACAGGGGGCGAGAAC
GGGGGGGGGGTAGGGAGCGGGGAAGGGGAGGAAGAAGACGAGGCAACGTT
TTCGCTGGCCCTGCACGATGATGTGCGGTTTAGAGTGAGAACGCTGGAGT
TCACGCAGCACTCGAGGGGAGTGGGTGTGGTCTTACCCCGATCCGGACGC
GGAAGAAGACGAAGAAGGCAAGGGGACAGGGGGCGAGAACGGGGGGGGGG
TAGGGAGCGGGGAAGGGGAGGAAGAAGACGAGGCAACGTTTTCGCTGGCC
CTGCACGATGATGTGCGGTTTAGAGTGAGAACGCTGGAGTTCACGCAGGT
TACGTCGACGGCCGCAGGTAGATTGCAGGCCACTACAGTGTCGACGGCGA
GAGGGGCAGGGAGCGCGTCCGGGGGGGTTACGGTTGGAGTTGTTGGGGGC
AGGGGGGGCGCCGCGGGGAACGGGACGGAGCCACCAATAGTCCGGTTACG
TCGACGGCCGCAGGTAGATTGCAGGCCACTACAGTGTCGACGGCGAGAGG
GGCAGGGAGCGCGTCCGGGGGGGTTACGGTTGGAGTTGTTGGGGGCAGGG
GGGGCGCCGCGGGGAACGGGACGGAGCCACCAATAGTCCGGGAGCGAGGG
ACAAGCGTAGACCTGACGGACGTCGAAGAGGCGCCGTCCGCCATGACCAT
CACCGGCAGCATGAACGAGGAAGGCTTGGGGCTGGTCTCGTGGTGGGAGT
AAGGAGCGAGGGACAAGCGTAGACCTGACGGACGTCGAAGAGGCGCCGTC
CGCCATGACCATCACCGGCAGCATGAACGAGGAAGGCTTGGGGCTGGTCT
CGTGGTGGGAGTAA
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