prot_C-linearis_contig106.995.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.995.1
Unique Nameprot_C-linearis_contig106.995.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length352
Homology
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.190e-35
Identity = 75/160 (46.88%), Postives = 97/160 (60.62%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGA 158
            +P+R +L+     +FKLV+ GA+ EQW EWLRVPLEHAA+ GN  L   LL+AGA++ AGW GCRGR+LL+A                    DV+         ALH A+  GHEAA KRLV+ GA+VNF+ PV + + L +A+ G   QLVNDL   GA
Sbjct:    4 FPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGA 163
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.360e-30
Identity = 73/155 (47.10%), Postives = 87/155 (56.13%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDL 153
            YP+R  LE     IFKLV+  AT EQW EWL+VPLE AAA GN +LF +LLEAGA  SAGW GCR RSL++A                  +PDV V        AL      GHE   +RLV AGA+VNF  P+ +S    +A   G EQLV D+
Sbjct:   47 YPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPMRKSPAFAQATRAGYEQLVGDI 201
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.390e-30
Identity = 88/160 (55.00%), Postives = 103/160 (64.38%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGA 158
            YP+R  LE     IFKL++  AT EQW +WLR PLEHAAA GN  L   LLEAGA+  AGW GCRGR++L+A XXXXXXXXXXXXXX    PDV+V        ALH+A   GHEAA + L++AGAN+    P  Q  P H A  GG   LV +LL  GA
Sbjct:    4 YPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGA 163
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 3.070e-30
Identity = 77/160 (48.12%), Postives = 89/160 (55.62%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGA 158
            YP+R  LE     IFKL+  GAT EQW EWLR PLEHAAA GN  L   LL AGAN  AGW GCRGR++L+A                    DV+V        ALH+AS  GHEAA K+L++AGA+VN   P      LH AV G    LV+ LL  GA
Sbjct:    4 YPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGA 163
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.650e-29
Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGA 158
            +P+R +L+     +FKLV+ GA+ EQW EWLRV LEHAA+ GN  L   LL AGA++ +GW GCR R+LL+A XXXXXXXXXXXXXXXX   DV+         AL+ A+  GHEAA KRL++AG++VNF+ PV + + L +A+ G   Q V+DLL  GA
Sbjct:    4 FPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGA 163
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 5.920e-28
Identity = 70/151 (46.36%), Postives = 89/151 (58.94%), Query Frame = 0 
Query:   20 IFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDVALHIASSMG-----------HEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGAS 159
            IFK+V+ GAT EQW  WLR PLEHAAA+GN  L + LL+AG +  AGW GCRGRSLL+A                   PDV+V   +ASS G           HEAA ++L++AGA+VNF     ++ PL  AV  G + LV +LL AGA+
Sbjct:   15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNV---VASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGAN 162
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 9.050e-27
Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHP 131
            YP+R   +     I+KLV+  AT +QW EWLRVPLEHAAA GN  L N LLEAGA+ SAGW GCRGR+L++A                  QPDV+V        +L+ A+  GH+ A +RL+ AGA+VNF+ P
Sbjct:    4 YPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDP 136
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.240e-25
Identity = 75/182 (41.21%), Postives = 94/182 (51.65%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQL------------VNDLLQAGASTSPQQADEY 168
            YP+R  L+     I+KLV+  AT +QW EWLRVPL+HAAA GN  L N LLEAGA+ SAGW G                           QPDV+V        AL+ A+  GHE A +RL+ AGA+VNF  PV+ S  L+ A+ GG  QL            VN LL AGA+ + +    Y
Sbjct:    4 YPERVLLQGMESEIWKLVSYSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWKGA--------------------------QPDVNVLSVSSKRSALYTATVCGHEDAARRLITAGADVNFDDPVHCSHVLYEAILGGHTQLLTLSCESGHLSVVNTLLTAGANVTIRSIGGY 159
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.460e-25
Identity = 65/141 (46.10%), Postives = 85/141 (60.28%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLH 139
            YP+R  L+     I+KLV+  AT +QW EWLR+PLEHAAA GN  L + LL AGA+ SAGW GCRGR+L++A                  Q DV+V        AL+ A+  GHE A +RLV AGA+V+F+ PV+ +  LH
Sbjct:    4 YPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLH 144
[Close]
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 1.260e-24
Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 0 
Query:    7 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHP 131
            YP+RP LE     IF L++ GAT EQW EWLR PLEHAAA G   L  +LL AGA+  AGWSGCRGR+LL+A                   PDV+V        ALH+++  GHEAA ++L++AGA+ N   P
Sbjct:    2 YPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDP 134
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ1_9PHAE3.190e-3546.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW91_9PHAE1.360e-3047.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE08_ECTSI1.390e-3055.00Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5K1F4_9PHAE3.070e-3048.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLL7_ECTSI1.650e-2953.13Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FXA8_ECTSI5.920e-2846.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRZ8_ECTSI9.050e-2747.37Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JRY1_9PHAE1.240e-2541.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS36_ECTSI1.460e-2546.10Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LBP9_ECTSI1.260e-2447.37Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 217..231
score: 39.52
coord: 169..184
score: 40.46
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 36..65
e-value: 19.0
score: 14.2
coord: 238..267
e-value: 1.9
score: 17.5
coord: 133..164
e-value: 1.5
score: 17.8
coord: 168..197
e-value: 2.9E-4
score: 30.2
coord: 308..337
e-value: 100.0
score: 11.7
coord: 201..230
e-value: 8.9E-4
score: 28.5
coord: 71..102
e-value: 2.9
score: 16.9
coord: 275..304
e-value: 4.0
score: 16.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 238..270
score: 9.484
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 168..200
score: 12.93
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 201..233
score: 11.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 133..165
score: 10.099
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 279..307
score: 9.351
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 308..340
score: 8.656
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 103..191
e-value: 1.7E-21
score: 78.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 12..102
e-value: 4.4E-10
score: 41.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 192..275
e-value: 2.9E-18
score: 67.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 276..351
e-value: 8.9E-16
score: 59.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 23..348
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 138..230
e-value: 2.2E-13
score: 50.6
coord: 42..129
e-value: 3.1E-7
score: 30.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 23..351
score: 66.612
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 41..164
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 240..348
coord: 41..164
coord: 208..268
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 240..348
coord: 208..268
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 171..230
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 171..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:364753..365808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.995.1mRNA_C-linearis_contig106.995.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 364611..366846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.995.1 ID=prot_C-linearis_contig106.995.1|Name=mRNA_C-linearis_contig106.995.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=352bp
MDTSNPYPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNA
ELFNELLEAGANSSAGWSGCRGRSLLEAAAHGGSVEVVSAILEAGTQPDV
DVALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLV
NDLLQAGASTSPQQADEYRCTPLHIAAKKGHGGIVSTLLRSGADVSVLDA
YGNSSLIWAAKGGHLAVVETLLAAGADVSVEGRMLDFLASSPLGFAAELG
HIGIMEAIINAGADVNAVFHSLFGPEVPALHCATSSGQVGAIDTLIKAGA
DIDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVC
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom