mRNA_C-linearis_contig106.995.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 173 bits (438), Expect = 4.300e-43 Identity = 185/504 (36.71%), Postives = 242/504 (48.02%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAV-NAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLDLPLPTWPIAPAHEIQRAKERVARAPADRSWRRRGWLVLLRARVENERSLKCRKAGEGDIAP-PFRNDGEGASASDNRSAGAEDEDTGGTLTGVVGILVRRAPEGVFRTVFGFL 1642
+P+R +L+ +FKLV+ GA+ EQW EWLRV LEHAA+ GN L LL AGA++ +GW GCR R+LL+A XXXXXXXXXXXXXXXX DV+ AL+ A+ GHEAA KRL++AG++VNF+ PV + + L +A+ G Q V+DLL GA P D+ DV+V G ++ XXXXXXXXXXXXXXXXXXXXXXX + + G TPL AE N ++ALL +V N G+T LH C + + G A++ LL GADETA + G+TP +L P E+ RA+ + RAP DR WRRRGWLV+LR+R + A + ++ R +G+GA D G +GVV +L PE VFR+V GFL
Sbjct: 4 FPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGAR--PNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNV----GLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLEDYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRAC--VEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTIVVAHRCAKGASDSGLSLCQARRNGKGARI-----------DVAGNSSGVVELLTELEPEAVFRSVLGFL 488
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 2.890e-42 Identity = 168/551 (30.49%), Postives = 210/551 (38.11%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVE---GRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLDLPLPTWPIAPA---------------------HEIQRAKERVARAPADRSWRRRGWLVLLRARVENERSLKCRKAG------------------EGDIAPPFRND----GEGASASDNRSAGAEDEDTGGTLTGVVGI---LVRRAPEGVFRTVFGFL 1642
YP+R LE IFKL+ GAT EQW EWLR PLEHAAA GN L LL AGAN AGW GCRGR++L+A DV+V ALH+AS GHEAA K+L++AGA+VN P LH AV G LV DLL G + + DV LD+ G S L+ + G L A + G TPL ++ + ALL RG VN GG +ALH+ C L R G + V LL GA ETA++ NG TP+ +L + + A EIQRA+ +ARAPADR+WRRR WLV+LRAR E R +G +GD + + D GEG+ +D G + T G G G+ LV E VFRT+ FL
Sbjct: 4 YPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLV-DLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPA-------LHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSR--GMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGER-GRDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.150e-39 Identity = 156/529 (29.49%), Postives = 214/529 (40.45%), Query Frame = 2
Query: 158 PYPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDVALHIASSMG-----------HEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLDL---------PL--PTWPIAPAHEIQRAKERVARAPADRSWRRRGWLVLLRARVENERSL------KCRKAGEGDIAPPFRNDGEGASASDNRSAGAEDEDTGGT------LTGVVGILVRRAPEGVFRTVFGFL 1642
P PQ + + IFK+V+ GAT EQW WLR PLEHAAA+GN L + LL+AG + AGW GCRGRSLL+A PDV+V +ASS G HEAA ++L++AGA+VNF ++ PL AV G + LV +LL AGA+ P + S D G+ + + G D ++G T L AE + ALL RG V+ G+TALH+V + H+ + V LL RGA E A+D NG+ P L P+ WP E++RA E +ARAPADR+WRRR WL++LR R ER++ K +K G G+ DG+ +++ R +G GG L G+V +LV +GVFRT+ G++
Sbjct: 2 PSPQTSPSGEEVE-IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNV---VASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGAN--PNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPST-DKNGHVATV------------------KVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSE-MEGHAP-DDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWP-----ELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGL--LLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 154 bits (389), Expect = 7.510e-37 Identity = 164/446 (36.77%), Postives = 200/446 (44.84%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLD---LPLPTWPIAPAH------EIQRAKERVARAPADRSWRRRGWLVLLRARVENER 1447
YP+R LE IFKL++ AT EQW +WLR PLEHAAA GN L LLEAGA+ AGW GCRGR++L+A XXXXXXXXXXXXXX PDV+V ALH+A GHEAA + L++AGAN+ P Q P H A GG LV +LL GA P + + V A GNS ++ + R D + XXXXXXXXXXXX G PL +A TM ALL R + + G +ALH C +G AV LL GA ETALD G+TP+ L + + + P + E+QRA +ARAPADR+WRRR WLV+LRAR ER
Sbjct: 4 YPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGAC--PNSRTRFGRTP----------------------LHVAAAVGNSRVV------------STLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXXAG------GSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTG-RTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRARAGRER 406
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 148 bits (373), Expect = 2.940e-34 Identity = 159/473 (33.62%), Postives = 197/473 (41.65%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQS---------------------------------TPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAE-ESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLDLPLPTWPIAPAHEIQRAKERVARAPADRSWRRRGWLVLLRARVENERSL 1453
YP+RP LE IF L++ GAT EQW EWLR PLEHAAA G L +LL AGA+ AGWSGCRGR+LL+A PDV+V ALH+++ GHEAA ++L++AGA+ N P TPLHRA + G++ +V L ST D+ DVS+ + NS XXXXXXXXXXXXXXXXXXXXV + A DR TPL E + + LL RG V+ G T LH+ C + GF+A V LL G E LD G TPAALL + + A E++RA +A APADR+WRRR WLV+LRAR E ER +
Sbjct: 2 YPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDM-PSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXX--XXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADM----------------------------------------DRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVS--GPMDKTMLHLAC--MTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSS-SRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERERGV 426
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.270e-33 Identity = 75/160 (46.88%), Postives = 97/160 (60.62%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGA 616
+P+R +L+ +FKLV+ GA+ EQW EWLRVPLEHAA+ GN L LL+AGA++ AGW GCRGR+LL+A DV+ ALH A+ GHEAA KRLV+ GA+VNF+ PV + + L +A+ G QLVNDL GA
Sbjct: 4 FPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGA 163
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 138 bits (348), Expect = 4.370e-31 Identity = 171/511 (33.46%), Postives = 222/511 (43.44%), Query Frame = 2
Query: 170 RPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVL-DAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPA-ALLDLPLPT---WPIAPAHEIQRAKERVARAPADRSWRRRGWLVLLRARVENERSL------KCRKAGEGDIAPPFRNDGE-GASASDNRSAGAEDEDTGGTLTGVVGILVRRAPEGVFRTVFGFL 1642
R L+ + IFKLV++GAT EQW EWLRVPLEHAAA+GN +L N+LL+AGA+ AGW GC R+LL+A PD +V L+ + +A + L++AGA+VN K ++ PL AV G + L XXXXXXX D L D Y + V+ R +D+ XXXXXXXXXXXXXXXXXXXXXX ++ + ALL RG V+ K G+TALH+ R + V LL GA E A+D+N +TP L ++ WP E+ RA E +ARAPADR+WRRRGWLV+L R + ER + K K G G+ DGE G + R GA + L GVV +LV EGVFRT+ G++
Sbjct: 7 RSLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGRSVLYQSILSNQKAVARELILAGADVNIKDRAEKAGPLLAAVRAGCDDLXXXXXXXXXXXXXXXXXXXXXXXXXXAGMNKAKIVSVLLSSPMTDKDALVDGYTPLMVA----AEQGHVATVKVLLAAGADVDVREVDYSCSAXXXXXXXXXXXXXXXXXXXXXXANEGVIDDQSPLHWAAGHNRPDCVAVLLDAGANINGRCNF---LDNHXXXXXXXXXXXXEALLALLSRGARVDEKTDDGSTALHLAGH--ARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWP-----ELDRALELLARAPADRAWRRRGWLVMLHERTKKERHVRGDRPRKGEKVGSGEEV--LLGDGERGRGKNARRRGGAAVK---ADLRGVVNVLVGLESEGVFRTIVGYV 498
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 135 bits (340), Expect = 5.290e-30 Identity = 136/454 (29.96%), Postives = 175/454 (38.55%), Query Frame = 2
Query: 164 PQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYRHSGFEAAVRHLLLRGADETALDDNGQTPAALLDLPLPTWP---IAPAH----EIQRAKERVARAPADRSWRRRGWLVLLRARVENERSLKCRKAGEGD 1480
P+R LE+ IFKL++ GAT E+W EWLR P EHAAA GN L LLEAGA+ AGW GCR R++L+A PDV+V ALH+A + HEAA + L++AGA+ + PV + TP H A GG + LV++ L GA + ++ + LD G S L+ R D XXXXXXXX M L+ RG VN G + LH C G + AV LL A ALD G+TP+ L+L + AP + EIQRA +ARAPADR+WRRR WL +LRAR ER + G+
Sbjct: 5 PKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPN-SRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLM--LASRNGHRSTVEVLLRAGADTTRRATDSGDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDDHGCTALHYAALHKHGGEVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAMVTLVKRGGNVNENTSNGVSVLHWACA--IPRPGVDRAVGLLLRWEAFAAALDSRGETPSNHLELAAALFAGTSAAPRNSVREEIQRALVLLARAPADRTWRRRCWLAMLRARAGREREACSSNSSTGN 453
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.800e-29 Identity = 73/155 (47.10%), Postives = 87/155 (56.13%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDL 601
YP+R LE IFKLV+ AT EQW EWL+VPLE AAA GN +LF +LLEAGA SAGW GCR RSL++A +PDV V AL GHE +RLV AGA+VNF P+ +S +A G EQLV D+
Sbjct: 47 YPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPMRKSPAFAQATRAGYEQLVGDI 201
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.280e-28 Identity = 212/437 (48.51%), Postives = 246/437 (56.29%), Query Frame = 2
Query: 161 YPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAELFNELLEAGANSSAGWSGCRGRSLLEAXXXXXXXXXXXXXXXXXTQPDVDV--------ALHIASSMGHEAAGKRLVVAGANVNFKHPVYQSTPLHRAVHGGREQLVNDLLQAGASTSPQQADEYXXXXXXXXXXXXXXXXXXXXXXXXXDVSVLDAYGNSSLIWXXXXXXXXXXXXXXXXXXXXXVEGRMLDFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLDMEGMTPLLRTAEESGFNTMSALLDRGVAVNAKGQGGNTALHMVCR*LYR-HSGFEAAVRHLLLRGADETALDDNGQTPAALLDL-----PLPTWPIAPAHEIQRAKERVARAPADRSWRRRGWLVLLRA 1429
YP+R L+ I+KLV+ AT +QW EWLR+PLEHAAA GN L + LL AGA+ SAGW GCRGR+L++A Q DV+V AL+ A+ GHE A +RLV AGA+V+F+ PV+ + LH XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL + M LL G ++ A+ GNT LH+ C YR H G EA V LL GADETAL++ G+TPA LLD T A EI R + +ARAPADR+WRRR WLV+LR+
Sbjct: 4 YPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXLTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVAC---YRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEA---EINRVRMLLARAPADRAWRRRCWLVMLRS 426 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig106.995.1 >prot_C-linearis_contig106.995.1 ID=prot_C-linearis_contig106.995.1|Name=mRNA_C-linearis_contig106.995.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=352bp MDTSNPYPQRPALEKRAKRIFKLVARGATNEQWTEWLRVPLEHAAAAGNAback to top mRNA from alignment at C-linearis_contig106:364611..366846+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig106.995.1 ID=mRNA_C-linearis_contig106.995.1|Name=mRNA_C-linearis_contig106.995.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2236bp|location=Sequence derived from alignment at C-linearis_contig106:364611..366846+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig106:364611..366846+ >mRNA_C-linearis_contig106.995.1 ID=mRNA_C-linearis_contig106.995.1|Name=mRNA_C-linearis_contig106.995.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2112bp|location=Sequence derived from alignment at C-linearis_contig106:364611..366846+ (Chordaria linearis ClinC8C monoicous)back to top |