prot_C-linearis_contig106.971.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.971.1
Unique Nameprot_C-linearis_contig106.971.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length155
Homology
BLAST of mRNA_C-linearis_contig106.971.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 2.050e-36
Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 0
Query:    1 MAVEPLHQEFDFEGRPAQLEKL-MDSPFAAAFCVPPGEDDEQHLVFLGLLEGTGQPLRNLTARVRFSVSSGKRADKEVGPLQAAANGRVYGTVQYPSMKELWPDLHSTQAVRAVEVDLIVEVRSLDRKVRHLRFELKVMYRREKVGRSQ-GASWRP 154
            +AVE L +EFDF+GR  Q +    DSPFA+ F VP   D+ Q+L F GL   TGQPLR LTARV+FSV+S + A+  VGPLQA  NGRVYG ++YPSM ELWP++ ST AVR V+VD +V++RS       L    KV YR+ +V  S+ GASW P
Sbjct:  466 IAVESLREEFDFDGRSYQPDNPPKDSPFASVFSVP-CSDEAQYLAFTGLGH-TGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWGP 619          
BLAST of mRNA_C-linearis_contig106.971.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 3.670e-18
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   81 QAAANGRVYGTVQYPSMKELWPDLHSTQAVRAVEVDLIVEVRSLDRKVRHLRFELKVMYRR-EKVGRSQGASWRP 154
            +A  NGRVYG VQ PSMK+LWP+++S  AVR V+VDL VE+RS      HL  ELKV+YRR +  G S+GASWRP
Sbjct:   86 EAGPNGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKVIYRRPQDHGSSEGASWRP 160          
BLAST of mRNA_C-linearis_contig106.971.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.000e-14
Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    8 QEFDFEGRPAQLEKLMDSPFAAAFCVPPGEDDEQHLVFLGLLEGTGQPLRNLTARVRFSVSSGKRADKEVGPLQAAANGRVYGTVQYPSMKELWPDLHSTQAVRAVEVDLIVEVRSLD-RKVRHLRFELKV 137
            +E DFEGRP        +P +           + H+VF GL + TG   R L   V F V +  +      P+Q AA+GR Y  V YPS++E+WP+L+ T  VRAVEVD+ VEV S D R+ R++   LKV
Sbjct:   54 KECDFEGRPLPGGGSGMTPSSTVS----SNGRDTHVVFTGLND-TGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179          
BLAST of mRNA_C-linearis_contig106.971.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.880e-13
Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 0
Query:    8 QEFDFEGRPAQLEKLMDSPFAAAFCVPPGEDDEQHLVFLGLLEGTGQPLRNLTARVRFSVSSGKRADKEVGPLQAAANGRVYGTVQYPSMKELWPDLHSTQAVRAVEVDLIVEVRSLD-RKVRHLRFELKVMYRR 141
            +E DFEGRP        +P +           + H+VF GL   TG   R L   V F V +  +      P+Q AA+GR Y  V YPS++++WP+L+ T  VRAVEVD+ VE+ S D R+ R++   LKV Y R
Sbjct:  232 KECDFEGRPLPGGGSGMTPSSTVS----SNGRDTHVVFTGL-HNTGHDPRGLRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTR 361          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCJ7_ECTSI2.050e-3653.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8W7_ECTSI3.670e-1860.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7N4_ECTSI3.000e-1440.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDQ6_9PHAE1.880e-1339.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:96752..99272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.971.1mRNA_C-linearis_contig106.971.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 96669..99557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.971.1 ID=prot_C-linearis_contig106.971.1|Name=mRNA_C-linearis_contig106.971.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=155bp
MAVEPLHQEFDFEGRPAQLEKLMDSPFAAAFCVPPGEDDEQHLVFLGLLE
GTGQPLRNLTARVRFSVSSGKRADKEVGPLQAAANGRVYGTVQYPSMKEL
WPDLHSTQAVRAVEVDLIVEVRSLDRKVRHLRFELKVMYRREKVGRSQGA
SWRP*
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