prot_C-linearis_contig106.1009.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.1009.1
Unique Nameprot_C-linearis_contig106.1009.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length408
Homology
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: D7FSQ1_ECTSI (Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ1_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 2.610e-178
Identity = 259/407 (63.64%), Postives = 311/407 (76.41%), Query Frame = 0
Query:    1 MKPISVALLGISVLECLGSTRAAYTIMTIANCAELQAAAEATATSGDILGQLVEAGIVCDDWVNVEVVENKLKLDGDAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMENIGVDTVDLDNMVHGGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGYGDGGAVHNKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNMRDGGAIYIDYDNLEFLPQDATYDSNRIVNNFDGIYKCDTIYVAGDGTGDEDAYSCLP 407
            MK ++VA +G + L   G   AA T M I+NCAELQAAAEATAT G++LGQLVE  I CD+W++VE+ ENKLKLDGD G TY  +KVRF VK+GA+LRV+VPVEFTG                +Q V+GG LNVEEG   RFLSSV M+ IGVDTVDL +M HGGC+YN+G +RFEGEFYA  C  VS+I+EYRVA+ GNGAGIWNG +A++VFK+AVEM FCG+W       N +EPG+DGGAIY+DG+VSFFEDALF NN+ DEG ALWIGV+GVVKFLK +KA F  NSG G+GG ++N GVLVMRNTA FNQGR++ G GGCI  GP++E VF+K+V F GC +    G AIYIDYDN+EFLP+DATY  N IVNN DG YKC+ +YV GDG+GDEDAY CLP
Sbjct:    1 MKQVAVAAIGAAALSAAGCM-AAPTPMDISNCAELQAAAEATATVGNVLGQLVEEEIFCDEWLSVEIPENKLKLDGDDGVTYKFDKVRFVVKSGAILRVDVPVEFTGDR--------------TQVVHGGVLNVEEGGKARFLSSVSMDGIGVDTVDLADMKHGGCVYNQGYVRFEGEFYANGCETVSTIEEYRVAMAGNGAGIWNGKDAKVVFKEAVEMDFCGNWP---WTSNGAEPGSDGGAIYSDGEVSFFEDALFTNNEADEGGALWIGVTGVVKFLKSAKATFQSNSGPGNGGTINNYGVLVMRNTASFNQGRSTDGSGGCISCGPASEMVFVKNVLFDGCQST-EHGAAIYIDYDNVEFLPEDATYTDNFIVNNSDGFYKCEDVYVVGDGSGDEDAYMCLP 388          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 6.800e-115
Identity = 197/381 (51.71%), Postives = 251/381 (65.88%), Query Frame = 0
Query:   27 MTIANCAELQAAAEATATSGDILGQLVEAGIVCDDWVNVEVVENKLKLDGDAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMENIGVDTVDLDNMVHGGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGYGDGGAVHNKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNMRDGGAIYIDYDNLEFLPQDATYDSNRIVNNFDGIYKCDTIYVAGDGTGDEDAYSCLP 407
            M IA+CA+LQ+AA A  + G+I G LVE+ I CDDW  VE+ +NKLKL G A TT+T   VRF V  GA+LRV+  VEFTG  E   G   A  P F + VNGG LNV      RFL SVKM ++GV+TV+ D M HGGCIYN+G +RFEG F A+AC   S+ ++Y     GNG  +WNG +A++VFK+AVEM  C    +   +  ++  G +GGA+YT+GK+SF+EDA+F +N+GDEG A+WIGV+ VVKFLKRSKA F  N+    GG + N+GVLVMRNTA F  G  S   GG I  G  +E VF+K V+F G + +   GGAI   Y N+EFLPQDATY+ N ++ N D  Y C  +YV G   G ED Y CLP
Sbjct:   26 MDIASCADLQSAAGAL-SGGNIEGVLVESEITCDDWTTVEISQNKLKLTGQA-TTFT--SVRFVVADGAILRVDTAVEFTGDQERRQGDGLA--PAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYP----GNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYT--GLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGVTAVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDG-VSGSSGGAINAGDVSEMVFIKHVDFIGNSADAH-GGAIATTYPNIEFLPQDATYEGN-VLQNADYDYVCPDVYVNGSEDGGEDGYICLP 391          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: D8LU56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU56_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.000e-100
Identity = 176/379 (46.44%), Postives = 231/379 (60.95%), Query Frame = 0
Query:   29 IANCAELQAAAEATATSGDILGQLVEAGIVCDDWVNVEVVENKLKLDGDAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMENIGVDTVDLDNMVHGGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGYGDGGAVHNKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNMRDGGAIYIDYDNLEFLPQDATYDSNRIVNNFDGIYKCDTIYVAGDGTGDEDAYSCLP 407
            IA+CA+L  AA+A  + GDI   ++EA I CD+W  VEV +NKLK  G +G T+T    RF V  GAVLR +VP+  TG                +Q VNGG LNV +G   RFL SV M ++GV +V  + MVHGGC+YN+G IRFEG F A+ C  VSS  +    + G+G G+WNG   +IVFK+AVEM  CG+        ++   G DGGAIYTDGKVSF+EDA F +N+ DEG A+ IGV G +KFLK++K  F  N+  G GG ++N G LV+RNT  F+ G    G GG I+ G  +  +F+K V+F   T     GGAI   Y N++ LP+DATY  N   N  D  ++C+ +YV GD  G ED Y C+P
Sbjct:   27 IASCADLLTAADAL-SGGDIEANIMEADIACDEWTTVEVGQNKLKFVG-SGATFT--SARFVVAAGAVLRADVPLVLTGDQ--------------TQAVNGGLLNVADGGKARFLDSVAMNDVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSS--DTASVIPGDGGGLWNGPGGKIVFKEAVEMKNCGERTGLR---SWRSQGLDGGAIYTDGKVSFYEDAQFTDNEADEGGAICIGVDGELKFLKKAKVTFTGNNSEGSGGHINNDGTLVLRNTGVFSDGYAG-GSGGAIYAGDFSSMLFVKHVDFLDNTAGAH-GGAIATSYPNIDDLPEDATYQGNSRTNA-DSDFECNNVYVNGDAGGGEDGYICIP 379          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 3.500e-88
Identity = 147/286 (51.40%), Postives = 189/286 (66.08%), Query Frame = 0
Query:  122 GFSQTVNGGALNVEEGATVRFLSSVKMENIGVDTVDLDNMVHGGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGYGDGGAVHNKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNMRDGGAIYIDYDNLEFLPQDATYDSNRIVNNFDGIYKCDTIYVAGDGTGDEDAYSCLP 407
            G  Q VNGG LNV      RFL SVKM ++GV+TV+ D M HGGCIYN+G +RFEG F A+AC   S+ ++Y     GNG  +WNG +A++VFK+AVEM  C    +   +  ++  G +GGA+YT+GK+SF+EDA+F +N+GDEG A+WIG +GVVKFLKRSKA F  N+    GG + N+GVLVMRNTA F  G  S   GG I  G ++E VF+K V F G + +   GGAI   Y N+EFLPQDATY+ N ++ N D  Y C  +YV G   G ED Y CLP
Sbjct:    9 GRGQAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYP----GNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYT--GLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGGTGVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDG-VSGSSGGAINAGDASEMVFIKHVNFIGNSADAH-GGAIATTYPNIEFLPQDATYEGN-VLQNADYDYVCPDVYVNGSEDGGEDGYICLP 285          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 3.380e-17
Identity = 85/299 (28.43%), Postives = 133/299 (44.48%), Query Frame = 0
Query:   29 IANCAELQAAAEATATSGDILGQLVEAGIVCDDWVNVEVVENKL------KLDGDAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMENIGV-----DTVDLDNMVH-GGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFL-YNSGYGDGGAVHNKGVLVMRNTAEF 314
            I  C +L AA E T T   ++     A I C+ + N+ +  N L       +D  +G++ +L  VR +V  GA L  E  V F G +E                V+GGA+ V EG+TVRFL+ V+M++I +     +  D  + V  GGC++  G  R +GE     C  +S   E   +  G G  ++ G    ++F   V +         H+  +F   G  GG IY  GKV+   D+ F++     G A++ G      F   ++A F   N+   +G A+ N+G       A F
Sbjct:  103 IETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSS-SLVNVRLDVTNGAKLFWETNVIFEGDEET------------DLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCD-ISGAGE---SPPGPGGAVYVGETGSVLFNGGVTI------TDTHITDDF---GGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALF 375          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.680e-9
Identity = 74/293 (25.26%), Postives = 115/293 (39.25%), Query Frame = 0
Query:   29 IANCAELQAAAEATATSGDILGQLVEAGIVCDDWVNVEVVENKLKLDGDAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMENIGV-----DTVDLDNMVH-GGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFL-YNSGYGDGGAVHNKGVLVMRNTAEF 314
            I  C +L AA E T T   ++     A I CD + N+ +  N L L                         E  V F G +E                V+GGA+ V EG+TVRFL+ V+M ++ +     +  D  + V  GGC++  G  R +GE     C  + + +    +  G G  ++ G    ++F + V +          +  +F   G  GG IY  GKV+   D+ F+      G A++ G      F   + A F   N+   +G A+ N G       A F
Sbjct:   22 IETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLTLFW-----------------------ETNVIFEGDEEA------------ELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGE----SPPGPGGAVYVGETGSVLFNEGVTI------TETSITDDF---GGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFF 266          
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.900e-5
Identity = 85/309 (27.51%), Postives = 113/309 (36.57%), Query Frame = 0
Query:   77 DAGTTYTLEKVRFEVKTGAVLRVEVPVEFTGGDEMVSGGVAAAVPGF------SQTVNGGALNVEEGATVRFL-------SSVKMENIG-VDTVDLDNMVHGGCIY---NKGDIRFEGE--FYAEACHAVSSIDEYRVALGGNGAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGKVSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGY--------GDGGAVH-NKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNMRDGGAIY 357
            DA T    E  RF V+    L+  VP    G   +   G     P         Q  NGG L+V EGAT  F+       +SV ++ IG V   D    +  G  Y     G I  +G   F  +A    + +        G    I N     I+FK  + M         +    F E    GGAIY  G++    ++LF  N   +G  ++    G + F     A F  NS Y         DGG V+ N G L   N A    G    G GG I+   +     + S  F      M  GGAIY
Sbjct:   44 DASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTM-------KDNEADGFFE--GIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTF--NGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGAS---GSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFM--GGAIY 336          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.1009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FSQ1_ECTSI2.610e-17863.64Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
D7G627_ECTSI6.800e-11551.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU56_ECTSI4.000e-10046.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L171_9PHAE3.500e-8851.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCE5_9PHAE3.380e-1728.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1Q9_ECTSI3.680e-925.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLJ6_ECTSI6.900e-527.51Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..407
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:468985..488357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.1009.1mRNA_C-linearis_contig106.1009.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 468949..488574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.1009.1 ID=prot_C-linearis_contig106.1009.1|Name=mRNA_C-linearis_contig106.1009.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=408bp
MKPISVALLGISVLECLGSTRAAYTIMTIANCAELQAAAEATATSGDILG
QLVEAGIVCDDWVNVEVVENKLKLDGDAGTTYTLEKVRFEVKTGAVLRVE
VPVEFTGGDEMVSGGVAAAVPGFSQTVNGGALNVEEGATVRFLSSVKMEN
IGVDTVDLDNMVHGGCIYNKGDIRFEGEFYAEACHAVSSIDEYRVALGGN
GAGIWNGIEAQIVFKQAVEMHFCGDWVSPHMHPNFSEPGADGGAIYTDGK
VSFFEDALFQNNQGDEGAALWIGVSGVVKFLKRSKARFLYNSGYGDGGAV
HNKGVLVMRNTAEFNQGRTSFGRGGCIFYGPSAEAVFLKSVEFFGCTTNM
RDGGAIYIDYDNLEFLPQDATYDSNRIVNNFDGIYKCDTIYVAGDGTGDE
DAYSCLP*
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