prot_C-linearis_contig106.1001.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.1001.1
Unique Nameprot_C-linearis_contig106.1001.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length113
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.1001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..58
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:395548..395886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.1001.1mRNA_C-linearis_contig106.1001.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 395548..395886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.1001.1 ID=prot_C-linearis_contig106.1001.1|Name=mRNA_C-linearis_contig106.1001.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=113bp
MLLLVFSFLRLLSTRIVAFNARTILHLAVMVQSAQTFRCVPPDNRPKSTW
KTHGATNDLGGLLFAACSLGVQALMLYCSARLGFHYHRTAWVPAWFRIQY
ICTHMRHAPSWR*
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