Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 339 |
| Cds size | 339 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927398.310385-CDS-C-linearis_contig106:395547..395886 | 1622927398.310385-CDS-C-linearis_contig106:395547..395886 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 395548..395886 + |
| 1690879677.0652542-CDS-C-linearis_contig106:395547..395886 | 1690879677.0652542-CDS-C-linearis_contig106:395547..395886 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 395548..395886 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig106.1001.1 >prot_C-linearis_contig106.1001.1 ID=prot_C-linearis_contig106.1001.1|Name=mRNA_C-linearis_contig106.1001.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=113bp
MLLLVFSFLRLLSTRIVAFNARTILHLAVMVQSAQTFRCVPPDNRPKSTW
KTHGATNDLGGLLFAACSLGVQALMLYCSARLGFHYHRTAWVPAWFRIQY
ICTHMRHAPSWR* back to topmRNA from alignment at C-linearis_contig106:395548..395886+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig106.1001.1 ID=mRNA_C-linearis_contig106.1001.1|Name=mRNA_C-linearis_contig106.1001.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=339bp|location=Sequence derived from alignment at C-linearis_contig106:395548..395886+ (Chordaria linearis ClinC8C monoicous)
ATGTTGTTGCTTGTTTTCTCCTTTCTTCGTTTGCTGTCAACTCGCATCGT
TGCTTTCAACGCGCGTACCATTCTACATCTCGCAGTGATGGTACAAAGCG
CACAGACATTTCGGTGTGTACCACCAGATAACCGACCGAAATCTACATGG
AAAACTCATGGTGCTACGAACGATTTGGGGGGCTTGCTTTTCGCCGCTTG
CAGTTTGGGGGTACAAGCCCTCATGCTGTATTGTTCGGCGCGTCTAGGCT
TCCACTACCACCGCACAGCCTGGGTGCCCGCGTGGTTTCGAATACAGTAT
ATATGTACTCACATGCGGCATGCGCCTTCGTGGCGATGA back to topCoding sequence (CDS) from alignment at C-linearis_contig106:395548..395886+ >mRNA_C-linearis_contig106.1001.1 ID=mRNA_C-linearis_contig106.1001.1|Name=mRNA_C-linearis_contig106.1001.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at C-linearis_contig106:395548..395886+ (Chordaria linearis ClinC8C monoicous)
ATGTTGTTGCTTGTTTTCTCCTTTCTTCGTTTGCTGTCAACTCGCATCGT
TGCTTTCAACGCGCGTACCATTCTACATCTCGCAGTGATGGTACAAAGCG
CACAGACATTTCGGTGTGTACCACCAGATAACCGACCGAAATCTACATGG
AAAACTCATGGTGCTACGAACGATTTGGGGGGCTTGCTTTTCGCCGCTTG
CAGTTTGGGGGTACAAGCCCTCATGCTGTATTGTTCGGCGCGTCTAGGCT
TCCACTACCACCGCACAGCCTGGGTGCCCGCGTGGTTTCGAATACAGTAT
ATATGTACTCACATGCGGCATGCGCCTTCGTGGCGATGAATGTTGTTGCT
TGTTTTCTCCTTTCTTCGTTTGCTGTCAACTCGCATCGTTGCTTTCAACG
CGCGTACCATTCTACATCTCGCAGTGATGGTACAAAGCGCACAGACATTT
CGGTGTGTACCACCAGATAACCGACCGAAATCTACATGGAAAACTCATGG
TGCTACGAACGATTTGGGGGGCTTGCTTTTCGCCGCTTGCAGTTTGGGGG
TACAAGCCCTCATGCTGTATTGTTCGGCGCGTCTAGGCTTCCACTACCAC
CGCACAGCCTGGGTGCCCGCGTGGTTTCGAATACAGTATATATGTACTCA
CATGCGGCATGCGCCTTCGTGGCGATGA back to top
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