prot_C-linearis_contig103.829.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.829.1
Unique Nameprot_C-linearis_contig103.829.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length225
Homology
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D7G450_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G450_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.740e-42
Identity = 92/162 (56.79%), Postives = 108/162 (66.67%), Query Frame = 0
Query:    1 MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRAL-----PGP------QAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 151
            MY  VAGVAV+AMLE +TM+GLFQLAEEV VDVD CTSK++V+QALLASGK L+P  A  G+A+     P P      +A PA V DA TDR  L+ LFN T G S   S  WGT + LGEWYGVT++  GR   L L +NNL GPIP + G LT L  L L
Sbjct:  227 MYHTVAGVAVRAMLEQQTMKGLFQLAEEVDVDVDACTSKESVIQALLASGKCLLPSGATSGQAVIKSNPPVPTRVSPVKAMPAPVRDARTDRTVLMELFNTTKGPSWTTSTAWGTSSSLGEWYGVTVNAEGRVTKLDLEKNNLTGPIPPSLGGLTALLLLRL 388          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5JWQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ1_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 3.880e-33
Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    1 MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNL 132
            MYP VAG  V AMLE KT+R LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PG                 V +ATTDR+AL+ LFN T G+S  N  GWGT APL +W+GVT+DG GR  +L LG N L
Sbjct:   90 MYPKVAGAVVGAMLEQKTIRDLFHLADTVGVDVESCTSHEAMVQVLLSSGKALLPGS----------------VPNATTDRSALMELFNATKGSSWTNKTGWGTSAPLQQWHGVTVDGAGRVTTLKLGWNKL 205          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K720_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K720_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.050e-31
Identity = 82/183 (44.81%), Postives = 97/183 (53.01%), Query Frame = 0
Query:    1 MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTLY 152
            MYP V GVA +A+L  +TMR LF+LA+EV VDV  CTSKD V+Q LLASGK+L   PA   +A+   Q    L                                 DA+TDRAAL+ LF  T G S K    WGT APLGEWYGVT+D  GR   L LG+N L G +P     LT L  L L+
Sbjct:  328 MYPEVGGVAARALLAIQTMRDLFELADEVDVDVAKCTSKDEVIQILLASGKALFRAPATGVKAMLEGQTVSDLWLLARENDVDMDRCKPLVIKILLGSGKDLKPTRDASTDRAALLALFIATNGPSWKKGTAWGTSAPLGEWYGVTVDDDGRVSQLELGDNGLSGALPPELARLTALTVLDLH 510          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D8LD84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD84_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.010e-28
Identity = 81/182 (44.51%), Postives = 93/182 (51.10%), Query Frame = 0
Query:    1 MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 151
            MYP + GVA +A+L ++TMR LF+LA+EV VDV  CTSKD V+Q LL SGK+L   PA    A    Q    L                                 DA+TDRAAL+ LF  T G S   S  WGT APLGEWYGVT+D  GR   L L EN L G IP     LT L  L L
Sbjct:  440 MYPEIGGVAARALLASQTMRDLFELADEVDVDVARCTSKDEVIQILLGSGKALFRAPATGVEAKLESQTMLDLCQLAREKDVDIDRYKTHVIKILLGSGKDLNPTRDASTDRAALLALFIATNGPSWTTSTAWGTAAPLGEWYGVTVDDDGRVSQLELRENGLSGVIPPEFARLTALTKLNL 621          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KAT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.420e-28
Identity = 73/161 (45.34%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    1 MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSA---------------------------GWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDG 134
            MYP VAG  V AMLE KTMR LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PGP                V +ATTDR+AL+ LFN T G+S  N                             GWGT  PL +W+GVT+DG GR  +L L  NNL G
Sbjct:  203 MYPKVAGAVVGAMLEQKTMRDLFHLADMVGVDVESCTSHEAMVQVLLSSGKALLPGP----------------VPNATTDRSALMELFNATNGSSWTNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXGWGTSTPLQQWHGVTVDGAGRVTTLDLSGNNLSG 347          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.580e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   78 TTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 151
            +TDRAALV LFN TGGA+ K +  W T APLG+WYGV ++  GR + L+L  NNL G IP   G+L  L  L L
Sbjct:   10 STDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNL 83          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A7X4J6B9_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4J6B9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 1.040e-11
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   72 ALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALG----------ENNLDGPIPSAPGNLTPLEYLTLY 152
            A    A+TDRAALV L+  TGG +  NS  W T APLGEW+GVT +  GR ++L +           +NN+ GPIP   GNL  LE +  Y
Sbjct:  132 AATDSASTDRAALVALYEATGGPNWLNSNNWLTDAPLGEWFGVTTNHEGRVVALEMTYYDWDTGQWIDNNISGPIPPELGNLANLERMQFY 222          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6N9A4F2_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9A4F2_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 1.050e-11
Identity = 48/113 (42.48%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   37 TSKDAVVQALLASG--KSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLE 147
            +S DA V ++  +G  +++ PG A   RA+ G     A +     DRAALV L+  TGG +   S+GW T AP+G+WYGVT D +G  + L L  N L G IP   GNL  LE
Sbjct:  321 SSSDASVASVDETGLVRAVAPGEAAI-RAVSGTVQGIADITVENPDRAALVALYQATGGPNWARSSGWLTDAPIGQWYGVTTDRIGAVVRLHLSANGLTGAIPPELGNLARLE 432          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6L7MLT0_9CHLR (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6L7MLT0_9CHLR)

HSP 1 Score: 73.2 bits (178), Expect = 2.660e-11
Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   80 DRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 151
            DRAALV L+N TGGA+   S  W +  P+ EW+GV  D  GR   L LGENNL G IP   G LT LE L L
Sbjct:  696 DRAALVALYNATGGATWSTSTNWLSDRPMWEWHGVGTDQEGRVSELWLGENNLSGVIPPELGKLTSLERLNL 767          
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6L8DNI5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L8DNI5_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 4.830e-11
Identity = 34/78 (43.59%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   74 VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 151
            +++ T+DR AL+ L+   GG +   S  W T APLG+WYGVT +  G+  +L L +NN++G +P A G+LT L  L L
Sbjct:  563 INNCTSDRDALLALYEAAGGMAWLGSGNWLTDAPLGDWYGVTTNAAGQVSTLVLVDNNMEGSLPPALGDLTGLTMLNL 640          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G450_ECTSI9.740e-4256.79Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JWQ1_9PHAE3.880e-3353.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K720_9PHAE2.050e-3144.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD84_ECTSI2.010e-2844.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAT8_9PHAE5.420e-2845.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3D6_9PHAE2.580e-1554.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7X4J6B9_9BACT1.040e-1145.05BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]
A0A6N9A4F2_9BACT1.050e-1142.48Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A6L7MLT0_9CHLR2.660e-1154.17Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A6L8DNI5_9BACT4.830e-1143.59Uncharacterized protein (Fragment) n=1 Tax=Gemmati... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 75..196
e-value: 2.5E-23
score: 84.1
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 121..183
coord: 121..184
NoneNo IPR availablePANTHERPTHR27000:SF525coord: 121..183
coord: 121..184
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 115..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:196680..200088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.829.1mRNA_C-linearis_contig103.829.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 195418..200436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.829.1 ID=prot_C-linearis_contig103.829.1|Name=mRNA_C-linearis_contig103.829.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=225bp
MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASG
KSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSA
GWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLT
LYKNQLTGPIPPALGRLAAMQMLCLSANQFSGERFREQGGRSADAPQLQR
GVLLIALQEVAVLPGFMLCSKYAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf