Homology
BLAST of mRNA_C-linearis_contig103.823.1 vs. uniprot
Match:
D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)
HSP 1 Score: 64.7 bits (156), Expect = 1.850e-9
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 0
Query: 4 LHYAACVGCVELTIALL-SRGLIDIDELHQEVLSPLTYAAIVDHATVARILASRGANVSIASAKEEGLTALRLSAQRGHVGVAEVLIIKAGADPEAIFSAEGATPLHSAAE-GHWKV 118
LH AA G +E +ALL SR IDI++ + +PL AA + V RIL ++GANVS+ + ++ TAL S Q G V +++KAGAD EA+ S EG TPLH A+ G W+V
Sbjct: 19 LHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVA--DDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTS-EGETPLHLVADSGCWEV 132
BLAST of mRNA_C-linearis_contig103.823.1 vs. uniprot
Match:
D8LT71_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT71_ECTSI)
HSP 1 Score: 61.2 bits (147), Expect = 1.110e-8
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 0
Query: 4 LHYAACVGCVELTIALLSRGLIDIDELHQEVLSPLTYAAIVDHATVARILASRGANVSIASAKEEGLTALRLSAQRGHVGVAEVLIIKAGADPEAIFSAEGATPLH 109
LH AA G VEL +ALLS G IDID+ Q +PL YA I V RIL GA ++ + + G+ AL +A GH+GV + L+ AGA+ E ++ T LH
Sbjct: 19 LHQAAQDGLVELALALLSSGWIDIDQGTQGGWTPLMYATIEGCLLVVRILLDNGAKTNLVA--DGGVDALSTAAMGGHLGVVKALLA-AGANLEGANTSLSTTALH 121
BLAST of mRNA_C-linearis_contig103.823.1 vs. uniprot
Match:
A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)
HSP 1 Score: 57.0 bits (136), Expect = 1.660e-6
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 0
Query: 11 GCVELTIALLSRGLIDIDELHQEV-LSPLTYAAIVDHATVARILASRGANVSIASAKEEGLTALRLSAQRGHVGVAEVLIIKAGADPEA---------------IFSAE--GATPLH-SAAEGHWKVMRVLI 123
G VE T+ALLSRG +DID + + +PL A+ + + V R+L GA VS+A +G TAL LS H+ V++ LI KAGA+ EA + S + GATPL+ SA +G + ++VL+
Sbjct: 7 GSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVAD--NDGATALHLSVFNQHLAVSKALI-KAGAEVEARCVDGMVVLIHAGANVDSEQESGATPLYTSARQGRLEDVKVLV 135
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.823.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
M G G L H Y A A C V G C V E L T I A L L S R G L I D I D E L H Q E V L S P L T Y A A I V D H A T V A R I L A S R G A N V S I A S A K E E G L T A L R L S A Q R G H V G V A E V L I I K A G A D P E A I F S A E G A T P L H S A A E G H W K V M R V L I E P G A M S T A A A A A R R G G T A V H R F Y T R R L R G G T S R R * 20 40 60 80 100 120 140 Expect = 1.85e-9 / Id = 44.44 Expect = 1.11e-8 / Id = 42.45 Expect = 1.66e-6 / Id = 38.64 Sequence D8LNF8_ECTSI D8LT71_ECTSI A0A6H5K1W5_9PHAE
Match Name E-value Identity Description
D8LNF8_ECTSI 1.850e-9 44.44 EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more] D8LT71_ECTSI 1.110e-8 42.45 EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more] A0A6H5K1W5_9PHAE 1.660e-6 38.64 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M G G L H Y A A C V G C V E L T I A L L S R G L I D I D E L H Q E V L S P L T Y A A I V D H A T V A R I L A S R G A N V S I A S A K E E G L T A L R L S A Q R G H V G V A E V L I I K A G A D P E A I F S A E G A T P L H S A A E G H W K V M R V L I E P G A M S T A A A A A R R G G T A V H R F Y T R R L R G G T S R R * 20 40 60 80 100 120 140 Expect = 2500.0 / Score = 2.1 Expect = 3.6 / Score = 16.6 Expect = 30.0 / Score = 13.5 Expect = 26.0 / Score = 13.7 Expect = 0.028 / Score = 14.9 Score = 8.603 Expect = 4.9E-8 / Score = 33.4 Score = 21.8 Expect = 2.3E-7 / Score = 32.3 Expect = 1.7E-14 / Score = 55.3 Score = Score = Score = Sequence SM00248 PF00023 PS50088 PF12796 PS50297 G3DSA:1.25.40.20 SSF48403 PTHR24134
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002110 Ankyrin repeat SMART SM00248 ANK_2a coord: 33..62 IPR002110 Ankyrin repeat PFAM PF00023 Ank coord: 104..127 IPR002110 Ankyrin repeat PROSITE PS50088 ANK_REPEAT coord: 33..65 IPR020683 Ankyrin repeat-containing domain PFAM PF12796 Ank_2 coord: 4..97 IPR020683 Ankyrin repeat-containing domain PROSITE PS50297 ANK_REP_REGION coord: 1..143 IPR036770 Ankyrin repeat-containing domain superfamily GENE3D 1.25.40.20 coord: 2..64 IPR036770 Ankyrin repeat-containing domain superfamily SUPERFAMILY 48403 Ankyrin repeat coord: 4..127 None No IPR available PANTHER PTHR24134 FAMILY NOT NAMED coord: 61..131
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig103.823.1 ID=prot_C-linearis_contig103.823.1|Name=mRNA_C-linearis_contig103.823.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=158bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: