Homology
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match:
A0A6H5JRB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB1_9PHAE)
HSP 1 Score: 93.2 bits (230), Expect = 8.980e-18
Identity = 90/120 (75.00%), Postives = 101/120 (84.17%), Query Frame = 0
Query: 313 LLQHSAEYESSTNSYGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDASGLCRASLANLDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHE 432
+L H A + S+N+YGLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL SG+CRASLANLDEVA +GQLRA+IWL++R ARAST AVDRAA AGH V+YLL +R E
Sbjct: 100 MLDHKAHHRCSSNAYGLAASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDSGICRASLANLDEVAREGQLRALIWLNERDARASTSAVDRAAEAGHLGTVEYLLHHRRE 219
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match:
D7FH20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH20_ECTSI)
HSP 1 Score: 93.6 bits (231), Expect = 1.970e-17
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0
Query: 373 ASGLCRASLANLDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHE 432
ASG+CRASLANLDEVA +GQLRA+IWLS+RGARAST AVDRAA AGH V+YLL +R E
Sbjct: 208 ASGICRASLANLDEVAREGQLRALIWLSERGARASTSAVDRAAEAGHLGTVEYLLHHRRE 267
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match:
F4PPW9_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PPW9_CAVFA)
HSP 1 Score: 59.3 bits (142), Expect = 1.310e-5
Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = 0
Query: 384 LDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHEGCSPEALVGAAGRGHLAVVKLLRELRPEQCGGCLSARAVAAAAGHSEVARWLDESDPE 490
LD A G L+ + +L + S +A+D AA G+ VVDYLL NR EGCS EA+ A G L +++ L C S RA+ AA + V WL + E
Sbjct: 176 LDLAASNGHLQVVEYLHNEKYGCSVVALDFAAKRGYHHVVDYLLDNRTEGCSSEAIDQVACTGDLEMIQKLHFRAKAPC----SYRAMNNAAKYLNVVEWLSNNRQE 278
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
50 100 150 200 250 300 350 400 450 500 550 600 Expect = 8.98e-18 / Id = 75.00 Expect = 1.97e-17 / Id = 76.67 Expect = 1.31e-5 / Id = 37.38 Sequence A0A6H5JRB1_9PHAE D7FH20_ECTSI F4PPW9_CAVFA
Match Name E-value Identity Description
A0A6H5JRB1_9PHAE 8.980e-18 75.00 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7FH20_ECTSI 1.970e-17 76.67 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] F4PPW9_CAVFA 1.310e-5 37.38 Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 400 450 500 550 600 Expect = 1.3E-16 / Score = 62.6 Expect = 9.2E-10 / Score = 40.0 Expect = 1.3E-7 / Score = 33.0 Score = Expect = 1.6E-7 / Score = 31.8 Score = Score = Score = Score = Score = Score = Sequence G3DSA:1.25.40.20 G3DSA:1.25.40.20 SSF48403 PF12796 PTHR46586 TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
IPR036770 Ankyrin repeat-containing domain superfamily GENE3D 1.25.40.20 coord: 132..291 IPR036770 Ankyrin repeat-containing domain superfamily GENE3D 1.25.40.20 coord: 401..502 IPR036770 Ankyrin repeat-containing domain superfamily SUPERFAMILY 48403 Ankyrin repeat coord: 158..484 IPR020683 Ankyrin repeat-containing domain PFAM PF12796 Ank_2 coord: 160..238 None No IPR available PANTHER PTHR46586 FAMILY NOT NAMED coord: 119..344 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 616..636 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..615 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 637..645 None No IPR available TMHMM TMhelix coord: 614..636
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig102.787.1 ID=prot_C-linearis_contig102.787.1|Name=mRNA_C-linearis_contig102.787.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=646bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR036770 Ankyrin_rpt-contain_sf IPR020683 Ankyrin_rpt-contain_dom