Homology
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5K738_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K738_9PHAE)
HSP 1 Score: 126 bits (316), Expect = 1.230e-34
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
NGYEQ + DPCVFRKVVD EV+ LIVIYVDDI A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y
Sbjct: 102 NGYEQCRVDPCVFRKVVDREVVGLIVIYVDDIFVAADEGEREVLFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 185
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE)
HSP 1 Score: 127 bits (319), Expect = 3.020e-34
Identity = 62/84 (73.81%), Postives = 67/84 (79.76%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y
Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5KW89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW89_9PHAE)
HSP 1 Score: 126 bits (317), Expect = 5.870e-34
Identity = 62/84 (73.81%), Postives = 66/84 (78.57%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K FPVKDLGECTWYDGCAI +VE G T LSQ +Y
Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKEFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)
HSP 1 Score: 128 bits (322), Expect = 1.060e-33
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y
Sbjct: 71 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 156
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)
HSP 1 Score: 127 bits (318), Expect = 2.150e-33
Identity = 62/84 (73.81%), Postives = 67/84 (79.76%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y
Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)
HSP 1 Score: 129 bits (324), Expect = 5.920e-33
Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
+GYEQ +ADPCVFRK+VD +V+ +IVIYVDDI++ G E E L SL+K PVKDLGECTWYDGCAIER++ELGTTTLSQK+Y
Sbjct: 905 SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAY 988
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)
HSP 1 Score: 129 bits (324), Expect = 5.960e-33
Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
+GYEQ +ADPCVFRK+VD +V+ +IVIYVDDI++ G E E L SL+K PVKDLGECTWYDGCAIER++ELGTTTLSQK+Y
Sbjct: 1458 SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAY 1541
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5KR39_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR39_9PHAE)
HSP 1 Score: 128 bits (322), Expect = 9.690e-33
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y
Sbjct: 284 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 369
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5JHI8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI8_9PHAE)
HSP 1 Score: 128 bits (322), Expect = 9.990e-33
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y
Sbjct: 540 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 625
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match:
A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)
HSP 1 Score: 125 bits (315), Expect = 1.070e-32
Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 0
Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85
NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E +R LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y
Sbjct: 102 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAY 185
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 25
M A N G Y E Q S K A D P C V F R K V V D E E V I L I V I Y V D D I L F A G P E N E R R G L F A S L Q K R F P V K D L G E C T W Y D G C A I E R N V E L G T T T L S Q K S Y 10 20 30 40 50 60 70 80 Expect = 1.23e-34 / Id = 72.62 Expect = 3.02e-34 / Id = 73.81 Expect = 5.87e-34 / Id = 73.81 Expect = 1.06e-33 / Id = 69.77 Expect = 2.15e-33 / Id = 73.81 Expect = 5.92e-33 / Id = 70.24 Expect = 5.96e-33 / Id = 70.24 Expect = 9.69e-33 / Id = 69.77 Expect = 9.99e-33 / Id = 69.77 Expect = 1.07e-32 / Id = 72.62 Sequence A0A6H5K738_9PHAE A0A6H5JE75_9PHAE A0A6H5KW89_9PHAE A0A6H5KCN6_9PHAE A0A6H5JWY8_9PHAE A0A6H5JKS3_9PHAE A0A6H5L175_9PHAE A0A6H5KR39_9PHAE A0A6H5JHI8_9PHAE A0A6H5JXU1_9PHAE Pages
back to top