prot_C-linearis_contig102.769.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5K738_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K738_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.230e-34 Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 NGYEQ + DPCVFRKVVD EV+ LIVIYVDDI A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y Sbjct: 102 NGYEQCRVDPCVFRKVVDREVVGLIVIYVDDIFVAADEGEREVLFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 185
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.020e-34 Identity = 62/84 (73.81%), Postives = 67/84 (79.76%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5KW89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW89_9PHAE) HSP 1 Score: 126 bits (317), Expect = 5.870e-34 Identity = 62/84 (73.81%), Postives = 66/84 (78.57%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K FPVKDLGECTWYDGCAI +VE G T LSQ +Y Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKEFPVKDLGECTWYDGCAIAMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.060e-33 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0 Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 ++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y Sbjct: 71 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 156
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.150e-33 Identity = 62/84 (73.81%), Postives = 67/84 (79.76%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E ER LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y Sbjct: 33 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAY 116
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.920e-33 Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 +GYEQ +ADPCVFRK+VD +V+ +IVIYVDDI++ G E E L SL+K PVKDLGECTWYDGCAIER++ELGTTTLSQK+Y Sbjct: 905 SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAY 988
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.960e-33 Identity = 59/84 (70.24%), Postives = 71/84 (84.52%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 +GYEQ +ADPCVFRK+VD +V+ +IVIYVDDI++ G E E L SL+K PVKDLGECTWYDGCAIER++ELGTTTLSQK+Y Sbjct: 1458 SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAY 1541
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5KR39_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR39_9PHAE) HSP 1 Score: 128 bits (322), Expect = 9.690e-33 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0 Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 ++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y Sbjct: 284 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 369
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5JHI8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI8_9PHAE) HSP 1 Score: 128 bits (322), Expect = 9.990e-33 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0 Query: 1 MANGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 ++NGYEQ + DPC+FRKVVD EV+ LIVIYVDDI+ + E ER L ASLQKRFPVKDLG+CTWYDGCAIE ++E GTT LSQ +Y Sbjct: 540 ISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAY 625
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.070e-32 Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 0 Query: 3 NGYEQSKADPCVFRKVVDEEVI-LIVIYVDDILFAGPENERRGLFASLQKRFPVKDLGECTWYDGCAIERNVELGTTTLSQKSY 85 NGYEQ + DPCVFRKVVD EV+ LIVIYVDDIL A E +R LFASL K+FPVKDLGECTWYDGCAI +VE G T LSQ +Y Sbjct: 102 NGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAY 185 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig102.769.1 ID=prot_C-linearis_contig102.769.1|Name=mRNA_C-linearis_contig102.769.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=85bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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